| Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
|---|---|
| Accession | NC_000914 |
| Length | 536,165 |
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Identifier: 16519815
GI number: 16519815
Start: 376354
End: 377658
Strand: Direct
Name: Not Available
Synonym: NGR_a02900
Alternate gene names: NA
Gene position: 376354-377658 (Clockwise)
Preceding gene: 16519816
Following gene: 16519814
Centisome position: 70.19
GC content: 57.85
Gene sequence:
>1305_bases GTGTTCGTCCATGGGGTCAACAATCGCAAGGAAGATGCTGGCTTTGACAACGACGTCGCGCGCAAAAAAGAATTCTTGAA GACGTTGCTTGCCGCGCCGCTCGGGCTCGACCCGGCCAAGGTGCACATCAGCTTTCCTTATTGGGGCGGAGACGGCGTCA AGTTCCTCTGGAACCAGGTGTCGCTGCCAGGTGGCGGCTATGAGACCTTGGCGCTGGGAGCGCAGAAAAATGAAATCGAC CTCTGGCTTCATGAGGTTCAACAGTCCTTTGGCGCAAAGTCCGTTATTCTTGGCAAGGTGAGCCGCGACCAATCGTTTGC GGATGCCGTCGATCTTATTTGGGACGCTGCAGCCGCGACCGCGAATTCTCCCGAGAATATTGAGAAGATCGCAGCGGCGT ATCAGGCGTCACAGCGTTACATCGAGAAATATCCCGCGCCGGCATGGGCGTTGAAAGCCGAGCCGCTATCCAATGAGGAA TTTCTCGATGCACTGCTGAGAGGCATTGCGGAACTGCCGGCAGACGAGAAAAAGCTCGAAACGTTCGGTTTGAGTGGATG GCTCGCCTCGACCAAGGAGGCCTTGGCCAGGCTGGGGTCGGCACCTGCCGACGCAACCACAGCAGGGTTGCTGGCGCTGG GGCGGAAATCCGCGCATCAGAAAGCGTCGCGATTCCTGGGCGACGTATTCGTCTACCTCAAAAATCGCGGGACCGCGGCG GCGCCCGGCCCGATTGTTAGGGCGGTTCTACAGGCGTTCCGTAACGCTGATGCCGCCCGGCAGGAGGGCGACGACAAGCT TATCATCGTCGGTCATAGCCTTGGTGGGGTCATCACCTACGATATTCTTTCCTATTTCGCTCCGGATCTGAAAGTCGACT ACCTGGCAACAATCGGTTCACAGGTCGGTTTGTTCGATGAGATGGCGCTCTATAGTCGACCGCTACCTCCCGGGATGCCG ACTGATCCGAAGAATGATCGCATTGCCGCCAATCCGAATGTCGGAAAGTGGCTGAACGTCTTCGACACCAATGACGTTTT CTCGTTCAGTGCCGAGGGTATTTACAAGAGCGTCAAGGATTTCCAGTACGACACGGGCTATGGCGGTTTCGGGGCGCATG GCGGTCGGAATAGACATATCGATGAGCATCGTTTTCGAATCCACGGCAGTGAAAGCCGATCCGACCGTCGCCGCGACGCA TGTCCTCTTGATCGGTTGCGGCGAGTATCCGAGCCTTGCGGCTGCGGGATATGGAAGCCTGCCGTCTCTCACGTCGCCGC CGATCTCCGTGGTCGCCGTCGCTGA
Upstream 100 bases:
>100_bases ACGCAAAAAACCACAAAATTTTCCCTTTGAGGGCGAACGCGGCCTCGGCTACAACTGATTCAAGGCATCAGAATTGGTTG GGGAGGTCGTTTTGCCAATA
Downstream 100 bases:
>100_bases CTGGTTTCTGACCGGATCCGATGCGATGCCAGCCGGTCAGGCGAAAGACCCGAGCGAAGCGTTCTCTAACGCGGATGCCC CTCTCGGCTCACTCGTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MFVHGVNNRKEDAGFDNDVARKKEFLKTLLAAPLGLDPAKVHISFPYWGGDGVKFLWNQVSLPGGGYETLALGAQKNEID LWLHEVQQSFGAKSVILGKVSRDQSFADAVDLIWDAAAATANSPENIEKIAAAYQASQRYIEKYPAPAWALKAEPLSNEE FLDALLRGIAELPADEKKLETFGLSGWLASTKEALARLGSAPADATTAGLLALGRKSAHQKASRFLGDVFVYLKNRGTAA APGPIVRAVLQAFRNADAARQEGDDKLIIVGHSLGGVITYDILSYFAPDLKVDYLATIGSQVGLFDEMALYSRPLPPGMP TDPKNDRIAANPNVGKWLNVFDTNDVFSFSAEGIYKSVKDFQYDTGYGGFGAHGGRNRHIDEHRFRIHGSESRSDRRRDA CPLDRLRRVSEPCGCGIWKPAVSHVAADLRGRRR
Sequences:
>Translated_434_residues MFVHGVNNRKEDAGFDNDVARKKEFLKTLLAAPLGLDPAKVHISFPYWGGDGVKFLWNQVSLPGGGYETLALGAQKNEID LWLHEVQQSFGAKSVILGKVSRDQSFADAVDLIWDAAAATANSPENIEKIAAAYQASQRYIEKYPAPAWALKAEPLSNEE FLDALLRGIAELPADEKKLETFGLSGWLASTKEALARLGSAPADATTAGLLALGRKSAHQKASRFLGDVFVYLKNRGTAA APGPIVRAVLQAFRNADAARQEGDDKLIIVGHSLGGVITYDILSYFAPDLKVDYLATIGSQVGLFDEMALYSRPLPPGMP TDPKNDRIAANPNVGKWLNVFDTNDVFSFSAEGIYKSVKDFQYDTGYGGFGAHGGRNRHIDEHRFRIHGSESRSDRRRDA CPLDRLRRVSEPCGCGIWKPAVSHVAADLRGRRR >Mature_434_residues MFVHGVNNRKEDAGFDNDVARKKEFLKTLLAAPLGLDPAKVHISFPYWGGDGVKFLWNQVSLPGGGYETLALGAQKNEID LWLHEVQQSFGAKSVILGKVSRDQSFADAVDLIWDAAAATANSPENIEKIAAAYQASQRYIEKYPAPAWALKAEPLSNEE FLDALLRGIAELPADEKKLETFGLSGWLASTKEALARLGSAPADATTAGLLALGRKSAHQKASRFLGDVFVYLKNRGTAA APGPIVRAVLQAFRNADAARQEGDDKLIIVGHSLGGVITYDILSYFAPDLKVDYLATIGSQVGLFDEMALYSRPLPPGMP TDPKNDRIAANPNVGKWLNVFDTNDVFSFSAEGIYKSVKDFQYDTGYGGFGAHGGRNRHIDEHRFRIHGSESRSDRRRDA CPLDRLRRVSEPCGCGIWKPAVSHVAADLRGRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4KF_RHISN (P55526)
Other databases:
- EMBL: U00090 - RefSeq: NP_443935.1 - GeneID: 962326 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02900
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47426; Mature: 47426
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVHGVNNRKEDAGFDNDVARKKEFLKTLLAAPLGLDPAKVHISFPYWGGDGVKFLWNQV CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECEECCCCHHHHHHHH SLPGGGYETLALGAQKNEIDLWLHEVQQSFGAKSVILGKVSRDQSFADAVDLIWDAAAAT CCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHC ANSPENIEKIAAAYQASQRYIEKYPAPAWALKAEPLSNEEFLDALLRGIAELPADEKKLE CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHH TFGLSGWLASTKEALARLGSAPADATTAGLLALGRKSAHQKASRFLGDVFVYLKNRGTAA HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC APGPIVRAVLQAFRNADAARQEGDDKLIIVGHSLGGVITYDILSYFAPDLKVDYLATIGS CCCHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCC QVGLFDEMALYSRPLPPGMPTDPKNDRIAANPNVGKWLNVFDTNDVFSFSAEGIYKSVKD HHCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCEECCHHHHHHHHHH FQYDTGYGGFGAHGGRNRHIDEHRFRIHGSESRSDRRRDACPLDRLRRVSEPCGCGIWKP CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCHHHHHHHCCCCCCCCHHH AVSHVAADLRGRRR HHHHHHHHHHCCCC >Mature Secondary Structure MFVHGVNNRKEDAGFDNDVARKKEFLKTLLAAPLGLDPAKVHISFPYWGGDGVKFLWNQV CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECEECCCCHHHHHHHH SLPGGGYETLALGAQKNEIDLWLHEVQQSFGAKSVILGKVSRDQSFADAVDLIWDAAAAT CCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHC ANSPENIEKIAAAYQASQRYIEKYPAPAWALKAEPLSNEEFLDALLRGIAELPADEKKLE CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHH TFGLSGWLASTKEALARLGSAPADATTAGLLALGRKSAHQKASRFLGDVFVYLKNRGTAA HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC APGPIVRAVLQAFRNADAARQEGDDKLIIVGHSLGGVITYDILSYFAPDLKVDYLATIGS CCCHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCC QVGLFDEMALYSRPLPPGMPTDPKNDRIAANPNVGKWLNVFDTNDVFSFSAEGIYKSVKD HHCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCEECCHHHHHHHHHH FQYDTGYGGFGAHGGRNRHIDEHRFRIHGSESRSDRRRDACPLDRLRRVSEPCGCGIWKP CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCHHHHHHHCCCCCCCCHHH AVSHVAADLRGRRR HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424