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Identifier: 16519747

GI number: 16519747

Start: 461330

End: 462076

Strand: Reverse

Name: Not Available

Synonym: NGR_a03590

Alternate gene names: NA

Gene position: 462076-461330 (Counterclockwise)

Preceding gene: 16519742

Following gene: 16519748

Centisome position: 86.18

GC content: 61.71

Gene sequence:

>747_bases
ATGCGCGCCGGACAAGGAGGGTCTCTGAGATTGTCGGTCTGCTCGGTCATAGTGCAGGCGCCGTCCCGGCGAGCGCTTGA
TGCGAAGGCTCGGCATGCCGTCCGCGACGACACGATCCTGCGGCAGCTGAAGCGGGATGCCGCGCCGCGCTCGCTCATTG
CGACGCCGCAAGCGCGTCAGGTGGCTGATCGATTCCATCTTTATGCAGATCTGCGGGTTGCAATCGAGGAGCAGATGAGC
CTTTCCGGCCGTGCCAGGGGACGAGCATTGCTGCCGGACAAAATCATCGGGAACGCGCAAGTCGATCTGATTCAGGATGA
TCCTCACGTTGACGCAACGCATCGGCGCCGGGTGCGTCACGGTCATCGACAATCACGGCAGGTGGTGTTCGAGACTGTGC
ACGCCTTGCGCAAGAAAGGTCTGTCCTGTTCGGCGATCGCACGTCGCACCGGCTACGGCCGGCGCAGCATCGCAAAATGG
CTGACTTTCGAGACGCCACCCGACCGACGGAAGTCGGTGTTGAAGCCGACATCACCCATAAAAGATGGCAATCGCTGCGG
ACGGCATCTGTACACGATATCAAACAGCGCGGTTACATCGGCAGTTTCTCGAATCTCGAGCGACTTCTCGCAGCCTGGCG
CCGCGCCGAGAGGTCGAGCAAGGACAGTGCGTCGCCGGCTCCTATCATACCCGATCAACCGGCTCGCGATGTTGTCCCGA
TGCGGGATCCGGAGACTGGCCACGTGA

Upstream 100 bases:

>100_bases
ACCGTAACGGTGAAGCTTCGGTTGAGCCGCTGGCGGTGCGCACATCAGAACTGTCAGCGACAAACGTTCACCGACTGACT
GCCGACGATTGCTTCCCCTT

Downstream 100 bases:

>100_bases
TCTCGCCGGTGGTCGCAGCTGCCCTCTGCATGAGGCCGCGAAGCATGCTGACGATCAATCAGGCGAGCAAGGTGGACGCC
CTGAAGCAGCGATCACATGA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRAGQGGSLRLSVCSVIVQAPSRRALDAKARHAVRDDTILRQLKRDAAPRSLIATPQARQVADRFHLYADLRVAIEEQMS
LSGRARGRALLPDKIIGNAQVDLIQDDPHVDATHRRRVRHGHRQSRQVVFETVHALRKKGLSCSAIARRTGYGRRSIAKW
LTFETPPDRRKSVLKPTSPIKDGNRCGRHLYTISNSAVTSAVSRISSDFSQPGAAPRGRARTVRRRLLSYPINRLAMLSR
CGIRRLAT

Sequences:

>Translated_248_residues
MRAGQGGSLRLSVCSVIVQAPSRRALDAKARHAVRDDTILRQLKRDAAPRSLIATPQARQVADRFHLYADLRVAIEEQMS
LSGRARGRALLPDKIIGNAQVDLIQDDPHVDATHRRRVRHGHRQSRQVVFETVHALRKKGLSCSAIARRTGYGRRSIAKW
LTFETPPDRRKSVLKPTSPIKDGNRCGRHLYTISNSAVTSAVSRISSDFSQPGAAPRGRARTVRRRLLSYPINRLAMLSR
CGIRRLAT
>Mature_248_residues
MRAGQGGSLRLSVCSVIVQAPSRRALDAKARHAVRDDTILRQLKRDAAPRSLIATPQARQVADRFHLYADLRVAIEEQMS
LSGRARGRALLPDKIIGNAQVDLIQDDPHVDATHRRRVRHGHRQSRQVVFETVHALRKKGLSCSAIARRTGYGRRSIAKW
LTFETPPDRRKSVLKPTSPIKDGNRCGRHLYTISNSAVTSAVSRISSDFSQPGAAPRGRARTVRRRLLSYPINRLAMLSR
CGIRRLAT

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4GE_RHISN (P55461)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443867.1
- GeneID:   962543
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03590
- HOGENOM:   HBG655392
- ProtClustDB:   CLSK2484864
- InterPro:   IPR012287
- Gene3D:   G3DSA:1.10.10.60

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27700; Mature: 27700

Theoretical pI: Translated: 12.23; Mature: 12.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGQGGSLRLSVCSVIVQAPSRRALDAKARHAVRDDTILRQLKRDAAPRSLIATPQARQ
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHH
VADRFHLYADLRVAIEEQMSLSGRARGRALLPDKIIGNAQVDLIQDDPHVDATHRRRVRH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEECCCCCCCHHHHHHHHH
GHRQSRQVVFETVHALRKKGLSCSAIARRTGYGRRSIAKWLTFETPPDRRKSVLKPTSPI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCC
KDGNRCGRHLYTISNSAVTSAVSRISSDFSQPGAAPRGRARTVRRRLLSYPINRLAMLSR
CCCHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
CGIRRLAT
HHHHHHCC
>Mature Secondary Structure
MRAGQGGSLRLSVCSVIVQAPSRRALDAKARHAVRDDTILRQLKRDAAPRSLIATPQARQ
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHH
VADRFHLYADLRVAIEEQMSLSGRARGRALLPDKIIGNAQVDLIQDDPHVDATHRRRVRH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEECCCCCCCHHHHHHHHH
GHRQSRQVVFETVHALRKKGLSCSAIARRTGYGRRSIAKWLTFETPPDRRKSVLKPTSPI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCC
KDGNRCGRHLYTISNSAVTSAVSRISSDFSQPGAAPRGRARTVRRRLLSYPINRLAMLSR
CCCHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
CGIRRLAT
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424