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The map label for this gene is repB

Identifier: 16519682

GI number: 16519682

Start: 1381

End: 2361

Strand: Direct

Name: repB

Synonym: NGR_a00020

Alternate gene names: NA

Gene position: 1381-2361 (Clockwise)

Preceding gene: 16519683

Following gene: 16519681

Centisome position: 0.26

GC content: 58.51

Gene sequence:

>981_bases
ATGGCGAGAAAGAACCTACTGGCGGGACTGGTAGACACAGCGGAAATCCCGCACGCAGACGTTGCGCCCGCCTACCCGAT
GCGCGGGGCTTCGAAGAGCATGGTGCGCTCGCTCGACGAGTTGTCGCGCCAGGCCGAGAAATTTCTCGAAGGAGAAACGG
TCGTCGAACTCGACCCTGAGACACTCGATGGTTCGTTCGTCTCTGATCGCATGGGCGATAGTTCCGAGCAGTTCGAGGAA
TTGAAGCAGGCGATTGCCGAGCGCGGGCAGGATACGCCCATCCTTGTGCGCCCCCACCCGTCGGCAGCCGATCGTTACCA
GATCGTCTTTGGACACCGCCGAGCCCGCGTTGCCCGCGAGCTCGGCCGCAAGGTTAAGGCGGTCGTCAAGGCGCTGGATG
ACCGCACGCACGTTATCGCCCAGGGACAGGAAAACTCGGCGCGCGCCAACCTCTCCTTCATTGAACGGGCGAACTTCGCC
TCGCACCTCGAGAAGCTTGGCTATGACCGGACAATCATAGGATCGGCGCTTGCTGCCAATGCGGCCGCTATCTCGAAAAT
GATCGCCGTAATAGATCGTATTCCTGAAGAGACAATCGCAAGAATCGGGCCCTGCCCGGCGGTCGGCCGAGAACGCTGGG
TCGAGTTGTCATTGCTTGTGGGTAAAACCGCCAACGAAGCGAAGGTGAAGGCAATCGTCTCTGATCCTTCCTTCAATGAA
CTGAGCACTGACGATCGCTTCAATTCCCTGTTTTCTGGTCTGAACAGCGCGGCGAAGCCTGTCCGGAAGACGACTCCAAA
GATCCTGGAGAACTGGCAACCGGCGGACAAGACCGTCTCCGCTAAGTATTCGAACTCCGCCAAGGCGTTTGCCTTGTCTA
TGAAATCAAGGAATGCCGGCCCCTTTGGGCGGTATATTGCAGACAACCTGGACCGGCTCTATGCCGAGTTCCTGGAGCAG
GGTAATCGGAAGGAAGACTGA

Upstream 100 bases:

>100_bases
TCGAACTCGTCCATGCCTCTTGGGGGAGGAAGGTTGTCAGTTGAGAAGTGTAAACTTCCCCGGGACGGCCCGGTAGATCT
CAGGCAAACGGAGCAGGCAC

Downstream 100 bases:

>100_bases
CGCAAAAGAAAAAGGCCCCCAGACGGTAACCATCGTGGAAGCCTCTCTCATCGTTTAGCAGCCTGAGAATCGCATTTCCA
CGAATCGCAGTCAAGAGTCT

Product: replication protein RepB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MARKNLLAGLVDTAEIPHADVAPAYPMRGASKSMVRSLDELSRQAEKFLEGETVVELDPETLDGSFVSDRMGDSSEQFEE
LKQAIAERGQDTPILVRPHPSAADRYQIVFGHRRARVARELGRKVKAVVKALDDRTHVIAQGQENSARANLSFIERANFA
SHLEKLGYDRTIIGSALAANAAAISKMIAVIDRIPEETIARIGPCPAVGRERWVELSLLVGKTANEAKVKAIVSDPSFNE
LSTDDRFNSLFSGLNSAAKPVRKTTPKILENWQPADKTVSAKYSNSAKAFALSMKSRNAGPFGRYIADNLDRLYAEFLEQ
GNRKED

Sequences:

>Translated_326_residues
MARKNLLAGLVDTAEIPHADVAPAYPMRGASKSMVRSLDELSRQAEKFLEGETVVELDPETLDGSFVSDRMGDSSEQFEE
LKQAIAERGQDTPILVRPHPSAADRYQIVFGHRRARVARELGRKVKAVVKALDDRTHVIAQGQENSARANLSFIERANFA
SHLEKLGYDRTIIGSALAANAAAISKMIAVIDRIPEETIARIGPCPAVGRERWVELSLLVGKTANEAKVKAIVSDPSFNE
LSTDDRFNSLFSGLNSAAKPVRKTTPKILENWQPADKTVSAKYSNSAKAFALSMKSRNAGPFGRYIADNLDRLYAEFLEQ
GNRKED
>Mature_325_residues
ARKNLLAGLVDTAEIPHADVAPAYPMRGASKSMVRSLDELSRQAEKFLEGETVVELDPETLDGSFVSDRMGDSSEQFEEL
KQAIAERGQDTPILVRPHPSAADRYQIVFGHRRARVARELGRKVKAVVKALDDRTHVIAQGQENSARANLSFIERANFAS
HLEKLGYDRTIIGSALAANAAAISKMIAVIDRIPEETIARIGPCPAVGRERWVELSLLVGKTANEAKVKAIVSDPSFNEL
STDDRFNSLFSGLNSAAKPVRKTTPKILENWQPADKTVSAKYSNSAKAFALSMKSRNAGPFGRYIADNLDRLYAEFLEQG
NRKED

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4CJ_RHISN (P55392)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443802.1
- ProteinModelPortal:   P55392
- SMR:   P55392
- GeneID:   962263
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00020
- HOGENOM:   HBG465861
- ProtClustDB:   CLSK516078
- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR017819
- InterPro:   IPR011111
- SMART:   SM00470
- TIGRFAMs:   TIGR00180
- TIGRFAMs:   TIGR03454

Pfam domain/function: PF02195 ParBc; PF07506 RepB; SSF110849 ParBc

EC number: NA

Molecular weight: Translated: 35851; Mature: 35720

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKNLLAGLVDTAEIPHADVAPAYPMRGASKSMVRSLDELSRQAEKFLEGETVVELDPE
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
TLDGSFVSDRMGDSSEQFEELKQAIAERGQDTPILVRPHPSAADRYQIVFGHRRARVARE
CCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHHHHHHHH
LGRKVKAVVKALDDRTHVIAQGQENSARANLSFIERANFASHLEKLGYDRTIIGSALAAN
HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AAAISKMIAVIDRIPEETIARIGPCPAVGRERWVELSLLVGKTANEAKVKAIVSDPSFNE
HHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHEEHHHEECCCCCCCEEEEEECCCCCCC
LSTDDRFNSLFSGLNSAAKPVRKTTPKILENWQPADKTVSAKYSNSAKAFALSMKSRNAG
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHCCCCCCEEEEEHHCCCCC
PFGRYIADNLDRLYAEFLEQGNRKED
CHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARKNLLAGLVDTAEIPHADVAPAYPMRGASKSMVRSLDELSRQAEKFLEGETVVELDPE
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
TLDGSFVSDRMGDSSEQFEELKQAIAERGQDTPILVRPHPSAADRYQIVFGHRRARVARE
CCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHHHHHHHH
LGRKVKAVVKALDDRTHVIAQGQENSARANLSFIERANFASHLEKLGYDRTIIGSALAAN
HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AAAISKMIAVIDRIPEETIARIGPCPAVGRERWVELSLLVGKTANEAKVKAIVSDPSFNE
HHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHEEHHHEECCCCCCCEEEEEECCCCCCC
LSTDDRFNSLFSGLNSAAKPVRKTTPKILENWQPADKTVSAKYSNSAKAFALSMKSRNAG
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHCCCCCCEEEEEHHCCCCC
PFGRYIADNLDRLYAEFLEQGNRKED
CHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424