Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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Identifier: 16519666

GI number: 16519666

Start: 27656

End: 28072

Strand: Reverse

Name: Not Available

Synonym: NGR_a00210

Alternate gene names: NA

Gene position: 28072-27656 (Counterclockwise)

Preceding gene: 16519665

Following gene: 16519667

Centisome position: 5.24

GC content: 60.91

Gene sequence:

>417_bases
ATGAACTCCACCTTCACGAGTCAGCCGCTCCTCAACAGGAGCGAACCGCGGGTATTCAAGGAATTCTATCGCCTGGTGAT
TGGCTGCAATCCGGCTTGGCAGGTGATGGCCCAAGTCTCGTTAGGCGAAATCCTCCGCAGCAAAGACGCGGACGCGTACA
GCTGCATAAACGCCAAGCGGGTCGACCTCCTGCTGGTGGACGGCAACTGCCGCCCTCGCCATGTCGTCGAATATCAGCGC
GGAGCGCACCATCAGGGTGCCGCAGCCGCGCGCGACGCGGTTAAGAAGGCGGCGCTCAGGTGCGCAGGGATCGGCTATTA
CGAAGTCGTTGCCGGCCAGACCACTCCGTCTGACCTCAGACGATTGGTCGAGAAGCTCGTGGAGAAGCCGGAACTTCCAA
TATGCGCTCCGGACTGA

Upstream 100 bases:

>100_bases
ACAGCGCTCGGCGACGAATGCCGTCGTAGGGCCATGGGCTCCCACAAGCGTTCCGGAATCACCGAAACGACCCGACGCTA
CCGAACAGCTCCGGATTGTT

Downstream 100 bases:

>100_bases
CGGGGGGCTCGGCCGCGGCTGTTGGCGCTCAGAAGCGCTCTGCCCCTCGACACAACTCAGACGCCGCAGCGGGCGAATAG
TCCGCACGCCCCTGACCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MNSTFTSQPLLNRSEPRVFKEFYRLVIGCNPAWQVMAQVSLGEILRSKDADAYSCINAKRVDLLLVDGNCRPRHVVEYQR
GAHHQGAAAARDAVKKAALRCAGIGYYEVVAGQTTPSDLRRLVEKLVEKPELPICAPD

Sequences:

>Translated_138_residues
MNSTFTSQPLLNRSEPRVFKEFYRLVIGCNPAWQVMAQVSLGEILRSKDADAYSCINAKRVDLLLVDGNCRPRHVVEYQR
GAHHQGAAAARDAVKKAALRCAGIGYYEVVAGQTTPSDLRRLVEKLVEKPELPICAPD
>Mature_138_residues
MNSTFTSQPLLNRSEPRVFKEFYRLVIGCNPAWQVMAQVSLGEILRSKDADAYSCINAKRVDLLLVDGNCRPRHVVEYQR
GAHHQGAAAARDAVKKAALRCAGIGYYEVVAGQTTPSDLRRLVEKLVEKPELPICAPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1631

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4BI_RHISN (P55376)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443786.1
- GeneID:   962261
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00210
- HOGENOM:   HBG655896

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15311; Mature: 15311

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTFTSQPLLNRSEPRVFKEFYRLVIGCNPAWQVMAQVSLGEILRSKDADAYSCINAKR
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
VDLLLVDGNCRPRHVVEYQRGAHHQGAAAARDAVKKAALRCAGIGYYEVVAGQTTPSDLR
EEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHEECCCCCHHHHH
RLVEKLVEKPELPICAPD
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNSTFTSQPLLNRSEPRVFKEFYRLVIGCNPAWQVMAQVSLGEILRSKDADAYSCINAKR
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
VDLLLVDGNCRPRHVVEYQRGAHHQGAAAARDAVKKAALRCAGIGYYEVVAGQTTPSDLR
EEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHEECCCCCHHHHH
RLVEKLVEKPELPICAPD
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424