Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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Identifier: 16519666
GI number: 16519666
Start: 27656
End: 28072
Strand: Reverse
Name: Not Available
Synonym: NGR_a00210
Alternate gene names: NA
Gene position: 28072-27656 (Counterclockwise)
Preceding gene: 16519665
Following gene: 16519667
Centisome position: 5.24
GC content: 60.91
Gene sequence:
>417_bases ATGAACTCCACCTTCACGAGTCAGCCGCTCCTCAACAGGAGCGAACCGCGGGTATTCAAGGAATTCTATCGCCTGGTGAT TGGCTGCAATCCGGCTTGGCAGGTGATGGCCCAAGTCTCGTTAGGCGAAATCCTCCGCAGCAAAGACGCGGACGCGTACA GCTGCATAAACGCCAAGCGGGTCGACCTCCTGCTGGTGGACGGCAACTGCCGCCCTCGCCATGTCGTCGAATATCAGCGC GGAGCGCACCATCAGGGTGCCGCAGCCGCGCGCGACGCGGTTAAGAAGGCGGCGCTCAGGTGCGCAGGGATCGGCTATTA CGAAGTCGTTGCCGGCCAGACCACTCCGTCTGACCTCAGACGATTGGTCGAGAAGCTCGTGGAGAAGCCGGAACTTCCAA TATGCGCTCCGGACTGA
Upstream 100 bases:
>100_bases ACAGCGCTCGGCGACGAATGCCGTCGTAGGGCCATGGGCTCCCACAAGCGTTCCGGAATCACCGAAACGACCCGACGCTA CCGAACAGCTCCGGATTGTT
Downstream 100 bases:
>100_bases CGGGGGGCTCGGCCGCGGCTGTTGGCGCTCAGAAGCGCTCTGCCCCTCGACACAACTCAGACGCCGCAGCGGGCGAATAG TCCGCACGCCCCTGACCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNSTFTSQPLLNRSEPRVFKEFYRLVIGCNPAWQVMAQVSLGEILRSKDADAYSCINAKRVDLLLVDGNCRPRHVVEYQR GAHHQGAAAARDAVKKAALRCAGIGYYEVVAGQTTPSDLRRLVEKLVEKPELPICAPD
Sequences:
>Translated_138_residues MNSTFTSQPLLNRSEPRVFKEFYRLVIGCNPAWQVMAQVSLGEILRSKDADAYSCINAKRVDLLLVDGNCRPRHVVEYQR GAHHQGAAAARDAVKKAALRCAGIGYYEVVAGQTTPSDLRRLVEKLVEKPELPICAPD >Mature_138_residues MNSTFTSQPLLNRSEPRVFKEFYRLVIGCNPAWQVMAQVSLGEILRSKDADAYSCINAKRVDLLLVDGNCRPRHVVEYQR GAHHQGAAAARDAVKKAALRCAGIGYYEVVAGQTTPSDLRRLVEKLVEKPELPICAPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1631
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4BI_RHISN (P55376)
Other databases:
- EMBL: U00090 - RefSeq: NP_443786.1 - GeneID: 962261 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a00210 - HOGENOM: HBG655896
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15311; Mature: 15311
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTFTSQPLLNRSEPRVFKEFYRLVIGCNPAWQVMAQVSLGEILRSKDADAYSCINAKR CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC VDLLLVDGNCRPRHVVEYQRGAHHQGAAAARDAVKKAALRCAGIGYYEVVAGQTTPSDLR EEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHEECCCCCHHHHH RLVEKLVEKPELPICAPD HHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNSTFTSQPLLNRSEPRVFKEFYRLVIGCNPAWQVMAQVSLGEILRSKDADAYSCINAKR CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC VDLLLVDGNCRPRHVVEYQRGAHHQGAAAARDAVKKAALRCAGIGYYEVVAGQTTPSDLR EEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHEECCCCCHHHHH RLVEKLVEKPELPICAPD HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424