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Identifier: 16519656

GI number: 16519656

Start: 39350

End: 39916

Strand: Direct

Name: Not Available

Synonym: NGR_a00310

Alternate gene names: NA

Gene position: 39350-39916 (Clockwise)

Preceding gene: 16519901

Following gene: 16519648

Centisome position: 7.34

GC content: 62.96

Gene sequence:

>567_bases
TTGAGCCGGATCATTCTCTCGCTTGATGCAGAGAACGCCGACCTCAAGGCGCGCGTTGCCTTCCTGGAGCAGCAGCTCTT
TGGGCCGAAATCGGAGAAGATGACGGCGATCGACCCGACGCAGGCGACGCTTGACCTTGGCGATCTCACCGACATTCCCG
CGGCGGCCAATGACGATGTTGCACCCGTGGCTGAAGGGCCAAAACAGGAGCGACGGTCACCGTCGCGCAACATCGGCCGT
TTACCCAGGCACCTCCCACGGTATGAAGAGCTCATCGAGCCGGAGAGCAAGATTTGCCCGTGCTGCTCGTTCGAGCTTCA
TTGCGTCGGCACGGACGTCAGTGAGGCGCTCGACATCGTGCCGGCGGTTGTCCGGGTAAAGCAGACGATCCGGCCAAGCT
ATGCATGCCGGGCCGGTGAAAGCGTCATTGTGCAAGCGCCCGCGTCGGCGCGCGTGATGGGAGAGAGCAATGTCGCCCCC
ATGCGGCTGGCGTTCTGCCTTGCTCACGCGCGACGCAAGTTCGTCGATGTCGTCAAGCTGACCGGCTCTTCGGAGGCGGG
CCGATGA

Upstream 100 bases:

>100_bases
AGCGGGCTGATCCTATTGGATTTGCTTGAAGATTCAGGATCATGTGCTAGGGTCTGCCATGCCGCTTTGACCCGACTCTT
TACCTCAGGATGCCGCGCAA

Downstream 100 bases:

>100_bases
CGCCGCCACCGAGGAAGGCCGCAGGCGCGCTGCGCATGAGTGTCGTGTTGGCAGGCCCGGCCATGGTCGACCCTGATGCC
GCATGCTCCGCGGTAACCAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSRIILSLDAENADLKARVAFLEQQLFGPKSEKMTAIDPTQATLDLGDLTDIPAAANDDVAPVAEGPKQERRSPSRNIGR
LPRHLPRYEELIEPESKICPCCSFELHCVGTDVSEALDIVPAVVRVKQTIRPSYACRAGESVIVQAPASARVMGESNVAP
MRLAFCLAHARRKFVDVVKLTGSSEAGR

Sequences:

>Translated_188_residues
MSRIILSLDAENADLKARVAFLEQQLFGPKSEKMTAIDPTQATLDLGDLTDIPAAANDDVAPVAEGPKQERRSPSRNIGR
LPRHLPRYEELIEPESKICPCCSFELHCVGTDVSEALDIVPAVVRVKQTIRPSYACRAGESVIVQAPASARVMGESNVAP
MRLAFCLAHARRKFVDVVKLTGSSEAGR
>Mature_187_residues
SRIILSLDAENADLKARVAFLEQQLFGPKSEKMTAIDPTQATLDLGDLTDIPAAANDDVAPVAEGPKQERRSPSRNIGRL
PRHLPRYEELIEPESKICPCCSFELHCVGTDVSEALDIVPAVVRVKQTIRPSYACRAGESVIVQAPASARVMGESNVAPM
RLAFCLAHARRKFVDVVKLTGSSEAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4AQ_RHISN (P55364)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443776.1
- GeneID:   962257
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00310
- HOGENOM:   HBG741435
- InterPro:   IPR004291

Pfam domain/function: PF03050 Transposase_25

EC number: NA

Molecular weight: Translated: 20422; Mature: 20290

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIILSLDAENADLKARVAFLEQQLFGPKSEKMTAIDPTQATLDLGDLTDIPAAANDDV
CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCC
APVAEGPKQERRSPSRNIGRLPRHLPRYEELIEPESKICPCCSFELHCVGTDVSEALDIV
CCCCCCCHHHHCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHH
PAVVRVKQTIRPSYACRAGESVIVQAPASARVMGESNVAPMRLAFCLAHARRKFVDVVKL
HHHHHHHHHHCCHHHHCCCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
TGSSEAGR
CCCCCCCC
>Mature Secondary Structure 
SRIILSLDAENADLKARVAFLEQQLFGPKSEKMTAIDPTQATLDLGDLTDIPAAANDDV
CEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCC
APVAEGPKQERRSPSRNIGRLPRHLPRYEELIEPESKICPCCSFELHCVGTDVSEALDIV
CCCCCCCHHHHCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHH
PAVVRVKQTIRPSYACRAGESVIVQAPASARVMGESNVAPMRLAFCLAHARRKFVDVVKL
HHHHHHHHHHCCHHHHCCCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
TGSSEAGR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424