Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
---|---|
Accession | NC_000907 |
Length | 1,830,138 |
Click here to switch to the map view.
The map label for this gene is ycbG [C]
Identifier: 16273233
GI number: 16273233
Start: 1402135
End: 1402581
Strand: Reverse
Name: ycbG [C]
Synonym: HI1323
Alternate gene names: 16273233
Gene position: 1402581-1402135 (Counterclockwise)
Preceding gene: 16273241
Following gene: 16273221
Centisome position: 76.64
GC content: 33.78
Gene sequence:
>447_bases ATGAAATACCAAAAACTCGAAAATCAAGAAGCAAATTGGAAATGGATTTACCTAATTCGTAAACATCGCGAAGGGGAAAA TATTACTCGCTACGAAGAACGTAGTTTGCAAGAAGCTAAAGCCCAAGAATTATTAGAATCCCAAAATTATCCTGAAAAAA TTGAAGAATGGATTAAAAATCATCTTTCTCCAGCCTTACCAATTAAGCTTGATCAAGCCATTCGTGCCCGCCGTAAACGC TTTTTTAATGGAGAAAAACAACATACCAAGAAAAAATCCATTGATTTGGAATATGCTGTTTGGCTACGTCTTTCTAAATA TTCTCGAAAAATGAAGATGACGCTTTCGGAAACAATTACCTATATGATTGACGAAAGAGAAAGCAAGGCACAATTTGAAA ATCAAATGGCAGCAATGAAAACCAGTTTGAAGAATTTATTAAAATAA
Upstream 100 bases:
>100_bases CCACATTATCGCATATTTAATAGCCTTGTGAAAATCCACTAGAAAATCGGCATAAAAACACGTATATTAATGCAGTTACC ACGTCACTCAATGATAAAAA
Downstream 100 bases:
>100_bases TCTTCCCCAAAAGTTATTTTAAATGGAGATTATCTGATTGATTTATCTTCCAAATTTACCGCCTTTTACTAATTTAAATC TTCCAATAATTTTCCCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKYQKLENQEANWKWIYLIRKHREGENITRYEERSLQEAKAQELLESQNYPEKIEEWIKNHLSPALPIKLDQAIRARRKR FFNGEKQHTKKKSIDLEYAVWLRLSKYSRKMKMTLSETITYMIDERESKAQFENQMAAMKTSLKNLLK
Sequences:
>Translated_148_residues MKYQKLENQEANWKWIYLIRKHREGENITRYEERSLQEAKAQELLESQNYPEKIEEWIKNHLSPALPIKLDQAIRARRKR FFNGEKQHTKKKSIDLEYAVWLRLSKYSRKMKMTLSETITYMIDERESKAQFENQMAAMKTSLKNLLK >Mature_148_residues MKYQKLENQEANWKWIYLIRKHREGENITRYEERSLQEAKAQELLESQNYPEKIEEWIKNHLSPALPIKLDQAIRARRKR FFNGEKQHTKKKSIDLEYAVWLRLSKYSRKMKMTLSETITYMIDERESKAQFENQMAAMKTSLKNLLK
Specific function: Unknown
COG id: COG3120
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0268 family [H]
Homologues:
Organism=Escherichia coli, GI1787190, Length=147, Percent_Identity=50.3401360544218, Blast_Score=150, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009390 - ProDom: PD033720 [H]
Pfam domain/function: PF06303 DUF1047 [H]
EC number: NA
Molecular weight: Translated: 17997; Mature: 17997
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQKLENQEANWKWIYLIRKHREGENITRYEERSLQEAKAQELLESQNYPEKIEEWIKN CCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH HLSPALPIKLDQAIRARRKRFFNGEKQHTKKKSIDLEYAVWLRLSKYSRKMKMTLSETIT HCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YMIDERESKAQFENQMAAMKTSLKNLLK HHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKYQKLENQEANWKWIYLIRKHREGENITRYEERSLQEAKAQELLESQNYPEKIEEWIKN CCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH HLSPALPIKLDQAIRARRKRFFNGEKQHTKKKSIDLEYAVWLRLSKYSRKMKMTLSETIT HCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YMIDERESKAQFENQMAAMKTSLKNLLK HHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA