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The map label for this gene is yfgE [C]

Identifier: 16273145

GI number: 16273145

Start: 1294919

End: 1295614

Strand: Reverse

Name: yfgE [C]

Synonym: HI1225.1

Alternate gene names: 16273145

Gene position: 1295614-1294919 (Counterclockwise)

Preceding gene: 16273146

Following gene: 16273137

Centisome position: 70.79

GC content: 33.48

Gene sequence:

>696_bases
TTGAATAAGCAACTCCCCTTACCTATTCATCAAATTGATGATGCTACATTAGAGAACTTTTACGGCGATAATAATCTTTT
ATTGCTCGATTCTTTACGCAAAAATTCATCTGATTTAAAACAACCGTTTTTCTACATTTGGGGAGATAAAGGCTCTGGTA
AAACCCATTTACTTAGAGCATTCAGTAACGAATATTTAATCAATCAACGTACTGCTATTTATGTACCCCTTAGCAAATCT
CAATATTTTTCTACCGCAGTTCTTGAAAATTTAGAGCAACAAGAATTAGTATGCTTAGATGATTTACAAAGTGTAATCGG
AAATGATGAATGGGAATTAGCTATTTTTGATCTGTTTAATCGAATTAAAGCAAGCGGGAAAACGCTTTTACTAATTAGTG
CAGATAAATCGCCTTCCGCACTTTCTGTCAAATTGCCTGATTTAAACTCTCGCTTAACTTGGGGGGAAATTTATCAATTA
AATTCATTAACAGACGAACAAAAAATCAAAGTACTACAACTCGCAGCTTACCAACGAGGATTCCAATTATCTGACGAAAC
TGCAAATTTTTTAATTACACGACTAGCACGAGATATGCATACTCTATTTGAAGCACTTGATCTACTAGATAAAGCATCAT
TACAAGCTCAACGAAATCTTACGATTCCTTTCGTCAAAAAAATTTTGAATCTCTAA

Upstream 100 bases:

>100_bases
TTGTTTTACCGAAAGCAAAAAATGAAGTAGAATAAGCCCCATTTCAAAGGGTTAAATTATCATTTAGCCCTTTCTTACTT
AATCTGTACTACATAAACAT

Downstream 100 bases:

>100_bases
CAAAAAAGGCACTAATGCGCCTTTTTAATCATCCACCTGATAATTTAACTTTAAACCCTTTTTGCTCTAATAATTGCTTG
AGCAAATCTCGTTTTTCCCC

Product: DNA replication initiation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MNKQLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDKGSGKTHLLRAFSNEYLINQRTAIYVPLSKS
QYFSTAVLENLEQQELVCLDDLQSVIGNDEWELAIFDLFNRIKASGKTLLLISADKSPSALSVKLPDLNSRLTWGEIYQL
NSLTDEQKIKVLQLAAYQRGFQLSDETANFLITRLARDMHTLFEALDLLDKASLQAQRNLTIPFVKKILNL

Sequences:

>Translated_231_residues
MNKQLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDKGSGKTHLLRAFSNEYLINQRTAIYVPLSKS
QYFSTAVLENLEQQELVCLDDLQSVIGNDEWELAIFDLFNRIKASGKTLLLISADKSPSALSVKLPDLNSRLTWGEIYQL
NSLTDEQKIKVLQLAAYQRGFQLSDETANFLITRLARDMHTLFEALDLLDKASLQAQRNLTIPFVKKILNL
>Mature_231_residues
MNKQLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDKGSGKTHLLRAFSNEYLINQRTAIYVPLSKS
QYFSTAVLENLEQQELVCLDDLQSVIGNDEWELAIFDLFNRIKASGKTLLLISADKSPSALSVKLPDLNSRLTWGEIYQL
NSLTDEQKIKVLQLAAYQRGFQLSDETANFLITRLARDMHTLFEALDLLDKASLQAQRNLTIPFVKKILNL

Specific function: Unknown

COG id: COG0593

COG function: function code L; ATPase involved in DNA replication initiation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dnaA family. HdA subfamily

Homologues:

Organism=Escherichia coli, GI226510964, Length=228, Percent_Identity=46.9298245614035, Blast_Score=214, Evalue=3e-57,
Organism=Escherichia coli, GI2367267, Length=229, Percent_Identity=25.3275109170306, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y122B_HAEIN (O86235)

Other databases:

- EMBL:   L42023
- RefSeq:   NP_439382.1
- ProteinModelPortal:   O86235
- SMR:   O86235
- GeneID:   950792
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1225.1
- NMPDR:   fig|71421.1.peg.1172
- TIGR:   HI_1225.1
- HOGENOM:   HBG508398
- OMA:   TRGTRSM
- ProtClustDB:   PRK06893
- BioCyc:   HINF71421:HI_1225.1-MONOMER
- InterPro:   IPR003593
- InterPro:   IPR020591
- InterPro:   IPR017788
- InterPro:   IPR013317
- PRINTS:   PR00051
- SMART:   SM00382
- TIGRFAMs:   TIGR03420

Pfam domain/function: PF00308 Bac_DnaA

EC number: NA

Molecular weight: Translated: 26367; Mature: 26367

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDKGSGKTHLLRA
CCCCCCCCHHHCCCHHHHHHCCCCCEEEEECCCCCCCHHCCCEEEEECCCCCCHHHHHHH
FSNEYLINQRTAIYVPLSKSQYFSTAVLENLEQQELVCLDDLQSVIGNDEWELAIFDLFN
HCCCEEEECCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHH
RIKASGKTLLLISADKSPSALSVKLPDLNSRLTWGEIYQLNSLTDEQKIKVLQLAAYQRG
HHHCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHCC
FQLSDETANFLITRLARDMHTLFEALDLLDKASLQAQRNLTIPFVKKILNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MNKQLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDKGSGKTHLLRA
CCCCCCCCHHHCCCHHHHHHCCCCCEEEEECCCCCCCHHCCCEEEEECCCCCCHHHHHHH
FSNEYLINQRTAIYVPLSKSQYFSTAVLENLEQQELVCLDDLQSVIGNDEWELAIFDLFN
HCCCEEEECCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHH
RIKASGKTLLLISADKSPSALSVKLPDLNSRLTWGEIYQLNSLTDEQKIKVLQLAAYQRG
HHHCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHCC
FQLSDETANFLITRLARDMHTLFEALDLLDKASLQAQRNLTIPFVKKILNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800