| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16273136
Identifier: 16273136
GI number: 16273136
Start: 1284588
End: 1287329
Strand: Reverse
Name: 16273136
Synonym: HI1217
Alternate gene names: NA
Gene position: 1287329-1284588 (Counterclockwise)
Preceding gene: 16273137
Following gene: 16273131
Centisome position: 70.34
GC content: 35.85
Gene sequence:
>2742_bases ATGAAGAAAGCTATAAAATTAAATTTAATTACACTTGGCCTAATTAATACGATCGGTATGACGATTACACAAGCTCAAGC CGAAGAAACATTAGGACAAATTGATGTAGTGGAAAAAGTTATATCAAACGATAAAAAACCTTTCACTGAAGCCAAAGCCA AAAGTACACGTGAAAATGTCTTTAAGGAAACACAAACCATTGACCAAGTGATTCGAAGTATCCCTGGTGCATTTACTCAA CAAGATAAAGGCTCGGGTGTCGTTTCTGTGAATATTCGTGGCGAAAATGGATTAGGTCGTGTCAATACTATGGTTGATGG TGTAACACAGACCTTCTATTCTACAGCCTTAGACTCAGGTCAATCAGGCGGAAGTTCTCAATTTGGTGCGGCAATCGATC CTAATTTTATTGCAGGTGTAGATGTTAATAAAAGCAACTTTTCAGGAGCAAGCGGTATAAATGCGTTAGCAGGCAGTGCT AATTTTAGAACATTAGGCGTTAATGATGTTATTACCGATGACAAACCATTTGGCATTATTCTGAAAGGAATGACAGGGAG TAATGCCACTAAATCCAATTTTATGACAATGGCTGCTGGCAGAAAATGGCTTGATAATGGTGGCTATGTAGGCGTGGTGT ATGGTTATAGCCAACGTGAAGTATCTCAAGATTACCGTATCGGTGGCGGAGAACGATTAGCATCATTAGGGCAGGATATT CTCGCGAAAGAAAAAGAAGCTTATTTTCGTAATGCGGGTTATATTTTAAATCCTGAAGGGCAATGGACACCTGATTTAAG CAAAAAACATTGGTCTTGTAACAAACCAGATTATCAGAAAAATGGTGATTGTAGTTATTATCGTATTGGATCTGCTGCAA AGACTAGAAGAGAAATTCTACAAGAATTATTAACAAATGGAAAAAAACCTAAGGATATTGAAAAGCTCCAAAAAGGTAAT GATGGAATTGAAGAAACTGACAAATCATTTGAACGTAATAAAGATCAATATAGTGTTGCACCGATTGAGCCGGGTAGTTT GCAATCTCGTTCTCGTAGCCATTTATTAAAATTTGAATATGGCGATGATCACCAAAATTTAGGGGCGCAATTACGCACGT TGGATAATAAAATTGGTTCTCGCAAAATTGAAAACCGTAATTACCAAGTCAATTATAACTTCAATAATAACAGCTATCTT GATCTTAATTTAATGGCTGCACATAACATTGGAAAAACTATTTATCCTAAAGGCGGTTTTTTTGCTGGCTGGCAAGTGGC AGATAAACTTATCACTAAAAATGTCGCAAATATTGTTGATATAAACAACAGCCATACTTTCTTACTGCCAAAAGAAATTG ATTTAAAAACCACATTAGGTTTTAACTATTTTACCAATGAATACAGTAAAAACCGTTTTCCAGAAGAATTAAGTTTGTTT TATAACGATGCTTCACATGATCAAGGCTTATATTCACACAGTAAAAGAGGGCGATATTCTGGCACAAAAAGTTTATTACC ACAACGTTCAGTAATCTTACAACCTTCTGGCAAGCAAAAATTTAAAACCGTGTATTTTGATACCGCACTTTCTAAAGGCA TTTATCATTTAAATTACAGCGTGAATTTTACCCATTATGCCTTTAATGGTGAGTATGTAGGTTACGAAAATACAGCGGGT CAACAAATTAATGAACCTATTTTGCATAAATCAGGGCATAAAAAGGCATTCAATCATTCTGCCACATTAAGTGCAGAACT GAGTGATTATTTTATGCCATTTTTTACTTATTCACGCACTCACAGAATGCCGAATATTCAAGAGATGTTTTTCTCTCAAG TGTCTAATGCAGGGGTAAACACAGCATTAAAACCTGAACAATCTGACACCTATCAACTAGGCTTTAATACTTATAAAAAA GGTCTCTTCACTCAAGACGATGTGCTAGGCGTAAAATTAGTAGGCTATCGTAGCTTTATTAAAAACTATATCCATAATGT TTATGGTGTTTGGTGGCGAGATGGCATGCCTACGTGGGCAGAAAGTAATGGATTTAAATATACTATTGCTCATCAAAATT ATAAGCCTATTGTGAAAAAGAGCGGCGTCGAGTTAGAAATTAACTATGACATGGGACGTTTTTTTGCGAATGTCTCTTAT GCATATCAACGAACAAATCAACCAACCAATTATGCCGATGCCAGCCCGCGTCCGAATAATGCTTCACAAGAAGACATTTT GAAACAAGGTTATGGCTTATCTCGTGTTTCAATGCTACCAAAAGACTACGGCAGATTAGAGCTTGGCACACGTTGGTTTG ATCAAAAATTAACCTTAGGTCTGGCAGCTCGTTATTATGGAAAAAGTAAACGTGCGACAATTGAAGAAGAATATATCAAT GGATCTCGCTTTAAAAAAAATACCTTGCGTCGTGAAAATTACTATGCCGTGAAAAAAACGGAAGATATTAAAAAACAACC GATTATTTTAGATTTACACGTCAGCTATGAACCAATCAAAGATTTGATTATTAAAGCGGAAGTACAAAATCTATTAGATA AACGTTATGTTGATCCGTTAGATGCTGGAAATGACGCGGCTTCGCAACGTTATTATTCAAGTTTAAATAATTCTATAGAA TGTGCGCAAGATTCTTCTGCTTGCGGTGGTTCAGATAAAACCGTGCTTTATAACTTTGCACGTGGAAGAACTTATATTCT GAGTTTAAACTATAAATTCTAA
Upstream 100 bases:
>100_bases TTTTTTAGGTATTTTCATTAAATTTATTAAATCATTCCTTGAGATCCCTCTTAATAAAATGGATAATCATAATATTTCTC AAAAATAAATAGGAACTATA
Downstream 100 bases:
>100_bases TAGGTTCATATAAAAAGGCATAGCTAATAGCTATGCCTTTAATTTTAGCATTTATTATCTTATTAAAAGATTATTACTAC AGTCTATCAATCATCCCTAA
Product: transferrin-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 913; Mature: 913
Protein sequence:
>913_residues MKKAIKLNLITLGLINTIGMTITQAQAEETLGQIDVVEKVISNDKKPFTEAKAKSTRENVFKETQTIDQVIRSIPGAFTQ QDKGSGVVSVNIRGENGLGRVNTMVDGVTQTFYSTALDSGQSGGSSQFGAAIDPNFIAGVDVNKSNFSGASGINALAGSA NFRTLGVNDVITDDKPFGIILKGMTGSNATKSNFMTMAAGRKWLDNGGYVGVVYGYSQREVSQDYRIGGGERLASLGQDI LAKEKEAYFRNAGYILNPEGQWTPDLSKKHWSCNKPDYQKNGDCSYYRIGSAAKTRREILQELLTNGKKPKDIEKLQKGN DGIEETDKSFERNKDQYSVAPIEPGSLQSRSRSHLLKFEYGDDHQNLGAQLRTLDNKIGSRKIENRNYQVNYNFNNNSYL DLNLMAAHNIGKTIYPKGGFFAGWQVADKLITKNVANIVDINNSHTFLLPKEIDLKTTLGFNYFTNEYSKNRFPEELSLF YNDASHDQGLYSHSKRGRYSGTKSLLPQRSVILQPSGKQKFKTVYFDTALSKGIYHLNYSVNFTHYAFNGEYVGYENTAG QQINEPILHKSGHKKAFNHSATLSAELSDYFMPFFTYSRTHRMPNIQEMFFSQVSNAGVNTALKPEQSDTYQLGFNTYKK GLFTQDDVLGVKLVGYRSFIKNYIHNVYGVWWRDGMPTWAESNGFKYTIAHQNYKPIVKKSGVELEINYDMGRFFANVSY AYQRTNQPTNYADASPRPNNASQEDILKQGYGLSRVSMLPKDYGRLELGTRWFDQKLTLGLAARYYGKSKRATIEEEYIN GSRFKKNTLRRENYYAVKKTEDIKKQPIILDLHVSYEPIKDLIIKAEVQNLLDKRYVDPLDAGNDAASQRYYSSLNNSIE CAQDSSACGGSDKTVLYNFARGRTYILSLNYKF
Sequences:
>Translated_913_residues MKKAIKLNLITLGLINTIGMTITQAQAEETLGQIDVVEKVISNDKKPFTEAKAKSTRENVFKETQTIDQVIRSIPGAFTQ QDKGSGVVSVNIRGENGLGRVNTMVDGVTQTFYSTALDSGQSGGSSQFGAAIDPNFIAGVDVNKSNFSGASGINALAGSA NFRTLGVNDVITDDKPFGIILKGMTGSNATKSNFMTMAAGRKWLDNGGYVGVVYGYSQREVSQDYRIGGGERLASLGQDI LAKEKEAYFRNAGYILNPEGQWTPDLSKKHWSCNKPDYQKNGDCSYYRIGSAAKTRREILQELLTNGKKPKDIEKLQKGN DGIEETDKSFERNKDQYSVAPIEPGSLQSRSRSHLLKFEYGDDHQNLGAQLRTLDNKIGSRKIENRNYQVNYNFNNNSYL DLNLMAAHNIGKTIYPKGGFFAGWQVADKLITKNVANIVDINNSHTFLLPKEIDLKTTLGFNYFTNEYSKNRFPEELSLF YNDASHDQGLYSHSKRGRYSGTKSLLPQRSVILQPSGKQKFKTVYFDTALSKGIYHLNYSVNFTHYAFNGEYVGYENTAG QQINEPILHKSGHKKAFNHSATLSAELSDYFMPFFTYSRTHRMPNIQEMFFSQVSNAGVNTALKPEQSDTYQLGFNTYKK GLFTQDDVLGVKLVGYRSFIKNYIHNVYGVWWRDGMPTWAESNGFKYTIAHQNYKPIVKKSGVELEINYDMGRFFANVSY AYQRTNQPTNYADASPRPNNASQEDILKQGYGLSRVSMLPKDYGRLELGTRWFDQKLTLGLAARYYGKSKRATIEEEYIN GSRFKKNTLRRENYYAVKKTEDIKKQPIILDLHVSYEPIKDLIIKAEVQNLLDKRYVDPLDAGNDAASQRYYSSLNNSIE CAQDSSACGGSDKTVLYNFARGRTYILSLNYKF >Mature_913_residues MKKAIKLNLITLGLINTIGMTITQAQAEETLGQIDVVEKVISNDKKPFTEAKAKSTRENVFKETQTIDQVIRSIPGAFTQ QDKGSGVVSVNIRGENGLGRVNTMVDGVTQTFYSTALDSGQSGGSSQFGAAIDPNFIAGVDVNKSNFSGASGINALAGSA NFRTLGVNDVITDDKPFGIILKGMTGSNATKSNFMTMAAGRKWLDNGGYVGVVYGYSQREVSQDYRIGGGERLASLGQDI LAKEKEAYFRNAGYILNPEGQWTPDLSKKHWSCNKPDYQKNGDCSYYRIGSAAKTRREILQELLTNGKKPKDIEKLQKGN DGIEETDKSFERNKDQYSVAPIEPGSLQSRSRSHLLKFEYGDDHQNLGAQLRTLDNKIGSRKIENRNYQVNYNFNNNSYL DLNLMAAHNIGKTIYPKGGFFAGWQVADKLITKNVANIVDINNSHTFLLPKEIDLKTTLGFNYFTNEYSKNRFPEELSLF YNDASHDQGLYSHSKRGRYSGTKSLLPQRSVILQPSGKQKFKTVYFDTALSKGIYHLNYSVNFTHYAFNGEYVGYENTAG QQINEPILHKSGHKKAFNHSATLSAELSDYFMPFFTYSRTHRMPNIQEMFFSQVSNAGVNTALKPEQSDTYQLGFNTYKK GLFTQDDVLGVKLVGYRSFIKNYIHNVYGVWWRDGMPTWAESNGFKYTIAHQNYKPIVKKSGVELEINYDMGRFFANVSY AYQRTNQPTNYADASPRPNNASQEDILKQGYGLSRVSMLPKDYGRLELGTRWFDQKLTLGLAARYYGKSKRATIEEEYIN GSRFKKNTLRRENYYAVKKTEDIKKQPIILDLHVSYEPIKDLIIKAEVQNLLDKRYVDPLDAGNDAASQRYYSSLNNSIE CAQDSSACGGSDKTVLYNFARGRTYILSLNYKF
Specific function: Probable receptor, tonB-dependent
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1217_HAEIN (P45114)
Other databases:
- EMBL: L42023 - PIR: G64110 - RefSeq: NP_439373.1 - ProteinModelPortal: P45114 - GeneID: 950767 - GenomeReviews: L42023_GR - KEGG: hin:HI1217 - NMPDR: fig|71421.1.peg.1163 - TIGR: HI_1217 - HOGENOM: HBG416966 - OMA: DGVTQTF - ProtClustDB: CLSK878089 - BioCyc: HINF71421:HI_1217-MONOMER - InterPro: IPR012910 - InterPro: IPR000531 - Gene3D: G3DSA:2.170.130.10 - Gene3D: G3DSA:2.40.170.20
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec
EC number: NA
Molecular weight: Translated: 102769; Mature: 102769
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00430 TONB_DEPENDENT_REC_1; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAIKLNLITLGLINTIGMTITQAQAEETLGQIDVVEKVISNDKKPFTEAKAKSTRENV CCCEEEEEEEEEHHHHHHCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH FKETQTIDQVIRSIPGAFTQQDKGSGVVSVNIRGENGLGRVNTMVDGVTQTFYSTALDSG HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC QSGGSSQFGAAIDPNFIAGVDVNKSNFSGASGINALAGSANFRTLGVNDVITDDKPFGII CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCEEE LKGMTGSNATKSNFMTMAAGRKWLDNGGYVGVVYGYSQREVSQDYRIGGGERLASLGQDI EECCCCCCCCHHCEEEECCCCHHHCCCCEEEEEECCCHHHHCHHHCCCCHHHHHHHHHHH LAKEKEAYFRNAGYILNPEGQWTPDLSKKHWSCNKPDYQKNGDCSYYRIGSAAKTRREIL HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHH QELLTNGKKPKDIEKLQKGNDGIEETDKSFERNKDQYSVAPIEPGSLQSRSRSHLLKFEY HHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEC GDDHQNLGAQLRTLDNKIGSRKIENRNYQVNYNFNNNSYLDLNLMAAHNIGKTIYPKGGF CCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCEEEEEEEEECCCCCEECCCCCC FAGWQVADKLITKNVANIVDINNSHTFLLPKEIDLKTTLGFNYFTNEYSKNRFPEELSLF CCHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCEEEEECCHHHHCCHHCCCCCHHHHHE YNDASHDQGLYSHSKRGRYSGTKSLLPQRSVILQPSGKQKFKTVYFDTALSKGIYHLNYS ECCCCCCCCHHHCCCCCCCCCHHHCCCCCCEEECCCCCCCEEEEEEEHHHHCCEEEEEEE VNFTHYAFNGEYVGYENTAGQQINEPILHKSGHKKAFNHSATLSAELSDYFMPFFTYSRT EEEEEEEECCEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH HRMPNIQEMFFSQVSNAGVNTALKPEQSDTYQLGFNTYKKGLFTQDDVLGVKLVGYRSFI CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHCCCCCCCCCCEEEEHHHHHHH KNYIHNVYGVWWRDGMPTWAESNGFKYTIAHQNYKPIVKKSGVELEINYDMGRFFANVSY HHHHHHHCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHCCCCEEEEECCHHHHHHHHHH AYQRTNQPTNYADASPRPNNASQEDILKQGYGLSRVSMLPKDYGRLELGTRWFDQKLTLG HHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCEECCCHHHHHHHHHH LAARYYGKSKRATIEEEYINGSRFKKNTLRRENYYAVKKTEDIKKQPIILDLHVSYEPIK HHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCHHHHH DLIIKAEVQNLLDKRYVDPLDAGNDAASQRYYSSLNNSIECAQDSSACGGSDKTVLYNFA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEC RGRTYILSLNYKF CCEEEEEEEEECC >Mature Secondary Structure MKKAIKLNLITLGLINTIGMTITQAQAEETLGQIDVVEKVISNDKKPFTEAKAKSTRENV CCCEEEEEEEEEHHHHHHCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH FKETQTIDQVIRSIPGAFTQQDKGSGVVSVNIRGENGLGRVNTMVDGVTQTFYSTALDSG HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC QSGGSSQFGAAIDPNFIAGVDVNKSNFSGASGINALAGSANFRTLGVNDVITDDKPFGII CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCEEE LKGMTGSNATKSNFMTMAAGRKWLDNGGYVGVVYGYSQREVSQDYRIGGGERLASLGQDI EECCCCCCCCHHCEEEECCCCHHHCCCCEEEEEECCCHHHHCHHHCCCCHHHHHHHHHHH LAKEKEAYFRNAGYILNPEGQWTPDLSKKHWSCNKPDYQKNGDCSYYRIGSAAKTRREIL HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHH QELLTNGKKPKDIEKLQKGNDGIEETDKSFERNKDQYSVAPIEPGSLQSRSRSHLLKFEY HHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEC GDDHQNLGAQLRTLDNKIGSRKIENRNYQVNYNFNNNSYLDLNLMAAHNIGKTIYPKGGF CCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCEEEEEEEEECCCCCEECCCCCC FAGWQVADKLITKNVANIVDINNSHTFLLPKEIDLKTTLGFNYFTNEYSKNRFPEELSLF CCHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCEEEEECCHHHHCCHHCCCCCHHHHHE YNDASHDQGLYSHSKRGRYSGTKSLLPQRSVILQPSGKQKFKTVYFDTALSKGIYHLNYS ECCCCCCCCHHHCCCCCCCCCHHHCCCCCCEEECCCCCCCEEEEEEEHHHHCCEEEEEEE VNFTHYAFNGEYVGYENTAGQQINEPILHKSGHKKAFNHSATLSAELSDYFMPFFTYSRT EEEEEEEECCEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH HRMPNIQEMFFSQVSNAGVNTALKPEQSDTYQLGFNTYKKGLFTQDDVLGVKLVGYRSFI CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHCCCCCCCCCCEEEEHHHHHHH KNYIHNVYGVWWRDGMPTWAESNGFKYTIAHQNYKPIVKKSGVELEINYDMGRFFANVSY HHHHHHHCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHCCCCEEEEECCHHHHHHHHHH AYQRTNQPTNYADASPRPNNASQEDILKQGYGLSRVSMLPKDYGRLELGTRWFDQKLTLG HHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCEECCCHHHHHHHHHH LAARYYGKSKRATIEEEYINGSRFKKNTLRRENYYAVKKTEDIKKQPIILDLHVSYEPIK HHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCHHHHH DLIIKAEVQNLLDKRYVDPLDAGNDAASQRYYSSLNNSIECAQDSSACGGSDKTVLYNFA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEC RGRTYILSLNYKF CCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023