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The map label for this gene is oppC

Identifier: 16273047

GI number: 16273047

Start: 1188363

End: 1189298

Strand: Reverse

Name: oppC

Synonym: HI1122

Alternate gene names: 16273047

Gene position: 1189298-1188363 (Counterclockwise)

Preceding gene: 16273048

Following gene: 16273046

Centisome position: 64.98

GC content: 43.38

Gene sequence:

>936_bases
ATGACAGATTATCGTACTCAGCCGATTAATCAGAAAAATGCGGATTTTGTGGAACAAGTGGCTGACCGTATTGAAGAAAT
GCAACTGGAAGGCCGCAGCCTATGGCAAGATGCGAAACGCCGTTTTTTCCGCAACAAAGCGGCCGTTGCCAGTCTGATTA
TTTTGGCGTTTATTATTATATTTATCACCGTAGCACCTTGGTTCTTCCCATTTACCTATGAAGATACCGATTGGAATATG
ATGAGCGCCGCACCAACAATGGAAGGCTATCACTTCTTCGGTACCGATGCCTCAGGTCGAGACTTGTTGGTACGTACTGC
TATCGGTGGACGTATTTCATTATTGGTCGGTATTGCTGGTGCTTTCATTTCCGTCACTATCGGCACAATTTATGGGGCGA
TTTCCGGTTATGTAGGCGGTAAAACAGATATGCTGATGATGCGCTTTTTGGAAATTCTTAGCTCATTTCCATTTATGTTT
TTCGTGATTTTGTTGGTGACCCTTTTTGGCCAAAACATTTTCTTAATTTTTATCGCTATCGGGGCCATTGCTTGGCTTGG
TCTTGCACGTATTGTACGCGGACAAACCCTCAGCCTAAAAAATAAAGAATTCGTCGAAGCCGCCATCGTTTGTGGCGTAC
CTCGTCGTCAAATCATTTTGAAACACATTATTCCGAATGTATTAGGCTTAGTGGCAGTTTATGCCTCGCTTGAAGTGCCT
GGACTCATTCTATTTGAATCATTCTTAAGCTTCTTAGGATTAGGTACACAAGAACCGATGAGTAGCTGGGGTGCACTCTT
AAGTGATGGTGCTGCACAAATGGAAGTGTCGCCTTGGTTATTAATTTTCCCAGCATTTTTCCTTTGCCTTACCCTATTTT
GTTTTAACTTTATCGGTGACGGGTTGCGTGATGCGCTCGATCCGAAAGATAGATAG

Upstream 100 bases:

>100_bases
CCTCACCATTTTAGTGGGGACATTAACCATTTTATTTAATGCGATTGTGGATATTTTATACGCCATCATCGATCCAAAAA
TTCGTTATTAAGGATAAATT

Downstream 100 bases:

>100_bases
GAGCGAATAATGAATCCTTTATTAGATGTAAAAAATCTCTACGTTCGCTTCAAAACACCAGATGGCGTCGTTACAGCAGT
GAATGACTTAAACTTCACGC

Product: oligopeptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTDYRTQPINQKNADFVEQVADRIEEMQLEGRSLWQDAKRRFFRNKAAVASLIILAFIIIFITVAPWFFPFTYEDTDWNM
MSAAPTMEGYHFFGTDASGRDLLVRTAIGGRISLLVGIAGAFISVTIGTIYGAISGYVGGKTDMLMMRFLEILSSFPFMF
FVILLVTLFGQNIFLIFIAIGAIAWLGLARIVRGQTLSLKNKEFVEAAIVCGVPRRQIILKHIIPNVLGLVAVYASLEVP
GLILFESFLSFLGLGTQEPMSSWGALLSDGAAQMEVSPWLLIFPAFFLCLTLFCFNFIGDGLRDALDPKDR

Sequences:

>Translated_311_residues
MTDYRTQPINQKNADFVEQVADRIEEMQLEGRSLWQDAKRRFFRNKAAVASLIILAFIIIFITVAPWFFPFTYEDTDWNM
MSAAPTMEGYHFFGTDASGRDLLVRTAIGGRISLLVGIAGAFISVTIGTIYGAISGYVGGKTDMLMMRFLEILSSFPFMF
FVILLVTLFGQNIFLIFIAIGAIAWLGLARIVRGQTLSLKNKEFVEAAIVCGVPRRQIILKHIIPNVLGLVAVYASLEVP
GLILFESFLSFLGLGTQEPMSSWGALLSDGAAQMEVSPWLLIFPAFFLCLTLFCFNFIGDGLRDALDPKDR
>Mature_310_residues
TDYRTQPINQKNADFVEQVADRIEEMQLEGRSLWQDAKRRFFRNKAAVASLIILAFIIIFITVAPWFFPFTYEDTDWNMM
SAAPTMEGYHFFGTDASGRDLLVRTAIGGRISLLVGIAGAFISVTIGTIYGAISGYVGGKTDMLMMRFLEILSSFPFMFF
VILLVTLFGQNIFLIFIAIGAIAWLGLARIVRGQTLSLKNKEFVEAAIVCGVPRRQIILKHIIPNVLGLVAVYASLEVPG
LILFESFLSFLGLGTQEPMSSWGALLSDGAAQMEVSPWLLIFPAFFLCLTLFCFNFIGDGLRDALDPKDR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1787498, Length=303, Percent_Identity=69.6369636963696, Blast_Score=407, Evalue=1e-115,
Organism=Escherichia coli, GI1787054, Length=279, Percent_Identity=36.5591397849462, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1787760, Length=261, Percent_Identity=33.7164750957854, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1789964, Length=278, Percent_Identity=35.9712230215827, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=30.0411522633745, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1788505, Length=220, Percent_Identity=34.0909090909091, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1787549, Length=283, Percent_Identity=27.208480565371, Blast_Score=94, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OPPC_HAEIN (P45053)

Other databases:

- EMBL:   L42023
- PIR:   D64184
- RefSeq:   NP_439279.1
- ProteinModelPortal:   P45053
- GeneID:   950091
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1122
- NMPDR:   fig|71421.1.peg.1078
- TIGR:   HI_1122
- HOGENOM:   HBG729429
- OMA:   TPFTASE
- ProtClustDB:   CLSK808487
- BioCyc:   HINF71421:HI_1122-MONOMER
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 34632; Mature: 34501

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcff26f4)-; HASH(0xd931144)-; HASH(0xd6f6b70)-; HASH(0xdfb23ec)-; HASH(0xc942dd4)-; HASH(0xdbf1600)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYRTQPINQKNADFVEQVADRIEEMQLEGRSLWQDAKRRFFRNKAAVASLIILAFIII
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FITVAPWFFPFTYEDTDWNMMSAAPTMEGYHFFGTDASGRDLLVRTAIGGRISLLVGIAG
HHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHH
AFISVTIGTIYGAISGYVGGKTDMLMMRFLEILSSFPFMFFVILLVTLFGQNIFLIFIAI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHH
GAIAWLGLARIVRGQTLSLKNKEFVEAAIVCGVPRRQIILKHIIPNVLGLVAVYASLEVP
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GLILFESFLSFLGLGTQEPMSSWGALLSDGAAQMEVSPWLLIFPAFFLCLTLFCFNFIGD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHH
GLRDALDPKDR
HHHHCCCCCCH
>Mature Secondary Structure 
TDYRTQPINQKNADFVEQVADRIEEMQLEGRSLWQDAKRRFFRNKAAVASLIILAFIII
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800