BacMap

Definition	Haemophilus influenzae Rd KW20 chromosome, complete genome.
Accession	NC_000907
Length	1,830,138

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The map label for this gene is oppD

Identifier: 16273046

GI number: 16273046

Start: 1187382

End: 1188353

Strand: Reverse

Name: oppD

Synonym: HI1121

Alternate gene names: 16273046

Gene position: 1188353-1187382 (Counterclockwise)

Preceding gene: 16273047

Following gene: 16273045

Centisome position: 64.93

GC content: 42.49

Gene sequence:

>972_bases
ATGAATCCTTTATTAGATGTAAAAAATCTCTACGTTCGCTTCAAAACACCAGATGGCGTCGTTACAGCAGTGAATGACTT
AAACTTCACGCTGAATGCAGGAAGCACGCTGGGCATCGTAGGCGAAAGTGGATCAGGCAAGTCACAAACAGCCTTTGCTT
TAATGGGTTTATTGGCAGCCAACGGTGAAGTGGAAGGCTCTGCCATTTTTGAAGGTAAAGAATTAGTTAATTTACCGAAT
GCTGAATTGAATAAAATCCGCGCCGAGCAAATTTCCATGATTTTCCAAGATCCAATGACGTCACTCAACCCATACATGAA
AATCGGTGAACAACTCATGGAAGTGCTGCAATTGCACAAGGGCTATGATAAACAAACTGCCTTTGCTGAATCCGTGAAAA
TGTTAGACGCAGTTAAAATGCCAGAAGCTAAAAAACGCATGGGCATGTATCCGCACGAGTTTTCTGGCGGTATGCGTCAA
CGGGTGATGATTGCGATGGCCTTATTATGCCGTCCCAAACTACTCATTGCAGATGAACCAACAACCGCTTTGGATGTGAC
CGTTCAAGCACAAATCATGACTTTATTAAATGAACTAAAACGTGAATTTAATACTGCAATTATTATGATTACCCATGATC
TTGGGGTAGTGGCTGGTATCTGCGATCAAGTCATGGTGATGTATGCTGGACGAACCATGGAATACGGCACAGCGGAACAA
ATTTTCTATCATCCAACCCATCCCTATTCCATAGGCTTAATGGATGCGATTCCTCGCTTAGACGGCAATGAAGAACACTT
GGTAACCATTCCTGGCAATCCACCGAATTTATTGCATTTGCCAAAAGGTTGTCCATTCTCACCTCGTTGCCAATTTGCTA
CCGAACAATGCCAAATTGCGCCAAAACTGACTACATTTAATCACGGTCAATTACGTAATTGTTGGTTATCAGCGGAGAAA
TTTAACCTATGA

Upstream 100 bases:

>100_bases
TTTCCCAGCATTTTTCCTTTGCCTTACCCTATTTTGTTTTAACTTTATCGGTGACGGGTTGCGTGATGCGCTCGATCCGA
AAGATAGATAGGAGCGAATA

Downstream 100 bases:

>100_bases
CAGTCTCAAACAACAAAGAATTACTCCTTGAAGTCAATCACTTAGGCGTCAGTTTTAAAATTAAAAATGATAAATCCCTT
TTCTTCGCCAAACCGCAAAC

Product: oligopeptide transporter ATP-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MNPLLDVKNLYVRFKTPDGVVTAVNDLNFTLNAGSTLGIVGESGSGKSQTAFALMGLLAANGEVEGSAIFEGKELVNLPN
AELNKIRAEQISMIFQDPMTSLNPYMKIGEQLMEVLQLHKGYDKQTAFAESVKMLDAVKMPEAKKRMGMYPHEFSGGMRQ
RVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDQVMVMYAGRTMEYGTAEQ
IFYHPTHPYSIGLMDAIPRLDGNEEHLVTIPGNPPNLLHLPKGCPFSPRCQFATEQCQIAPKLTTFNHGQLRNCWLSAEK
FNL

Sequences:

>Translated_323_residues
MNPLLDVKNLYVRFKTPDGVVTAVNDLNFTLNAGSTLGIVGESGSGKSQTAFALMGLLAANGEVEGSAIFEGKELVNLPN
AELNKIRAEQISMIFQDPMTSLNPYMKIGEQLMEVLQLHKGYDKQTAFAESVKMLDAVKMPEAKKRMGMYPHEFSGGMRQ
RVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDQVMVMYAGRTMEYGTAEQ
IFYHPTHPYSIGLMDAIPRLDGNEEHLVTIPGNPPNLLHLPKGCPFSPRCQFATEQCQIAPKLTTFNHGQLRNCWLSAEK
FNL
>Mature_323_residues
MNPLLDVKNLYVRFKTPDGVVTAVNDLNFTLNAGSTLGIVGESGSGKSQTAFALMGLLAANGEVEGSAIFEGKELVNLPN
AELNKIRAEQISMIFQDPMTSLNPYMKIGEQLMEVLQLHKGYDKQTAFAESVKMLDAVKMPEAKKRMGMYPHEFSGGMRQ
RVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDQVMVMYAGRTMEYGTAEQ
IFYHPTHPYSIGLMDAIPRLDGNEEHLVTIPGNPPNLLHLPKGCPFSPRCQFATEQCQIAPKLTTFNHGQLRNCWLSAEK
FNL

Specific function: Part of the binding-protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system

COG id: COG0444

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain

Homologues:

Organism=Homo sapiens, GI9665248, Length=231, Percent_Identity=29.004329004329, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI116734710, Length=239, Percent_Identity=26.3598326359833, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI9955963, Length=236, Percent_Identity=28.3898305084746, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI4505771, Length=226, Percent_Identity=30.0884955752212, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI9961252, Length=226, Percent_Identity=30.0884955752212, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI9961250, Length=226, Percent_Identity=30.0884955752212, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI156105685, Length=224, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI105990541, Length=235, Percent_Identity=28.0851063829787, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI42741659, Length=233, Percent_Identity=27.0386266094421, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI148612844, Length=230, Percent_Identity=28.2608695652174, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI255708477, Length=230, Percent_Identity=28.2608695652174, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI66529005, Length=224, Percent_Identity=29.4642857142857, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI171184400, Length=257, Percent_Identity=27.2373540856031, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI21536378, Length=242, Percent_Identity=28.099173553719, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI27436953, Length=222, Percent_Identity=23.4234234234234, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI27477115, Length=221, Percent_Identity=23.0769230769231, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI11967969, Length=223, Percent_Identity=27.3542600896861, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI48994883, Length=320, Percent_Identity=77.1875, Blast_Score=516, Evalue=1e-147,
Organism=Escherichia coli, GI1789963, Length=313, Percent_Identity=44.408945686901, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI1787759, Length=317, Percent_Identity=43.8485804416404, Blast_Score=285, Evalue=2e-78,
Organism=Escherichia coli, GI145693107, Length=264, Percent_Identity=50.7575757575758, Blast_Score=268, Evalue=5e-73,
Organism=Escherichia coli, GI1788506, Length=260, Percent_Identity=48.0769230769231, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI1787500, Length=321, Percent_Identity=41.7445482866044, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1787548, Length=311, Percent_Identity=39.2282958199357, Blast_Score=221, Evalue=5e-59,
Organism=Escherichia coli, GI1789962, Length=316, Percent_Identity=37.6582278481013, Blast_Score=214, Evalue=9e-57,
Organism=Escherichia coli, GI1787758, Length=325, Percent_Identity=35.3846153846154, Blast_Score=194, Evalue=6e-51,
Organism=Escherichia coli, GI1789890, Length=262, Percent_Identity=36.6412213740458, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI48994997, Length=259, Percent_Identity=35.1351351351351, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1787547, Length=255, Percent_Identity=34.1176470588235, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1789891, Length=211, Percent_Identity=36.4928909952607, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1786398, Length=273, Percent_Identity=31.8681318681319, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1789032, Length=234, Percent_Identity=29.9145299145299, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI87081791, Length=284, Percent_Identity=29.9295774647887, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787712, Length=258, Percent_Identity=30.6201550387597, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1788225, Length=249, Percent_Identity=28.9156626506024, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787370, Length=232, Percent_Identity=28.8793103448276, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87081834, Length=228, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081709, Length=251, Percent_Identity=26.2948207171315, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1788761, Length=245, Percent_Identity=25.7142857142857, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786703, Length=232, Percent_Identity=31.8965517241379, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787105, Length=218, Percent_Identity=31.1926605504587, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788450, Length=231, Percent_Identity=29.004329004329, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787089, Length=222, Percent_Identity=30.6306306306306, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1789991, Length=215, Percent_Identity=30.2325581395349, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790190, Length=268, Percent_Identity=28.7313432835821, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787029, Length=243, Percent_Identity=29.6296296296296, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788644, Length=193, Percent_Identity=32.1243523316062, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790162, Length=246, Percent_Identity=26.4227642276423, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082267, Length=231, Percent_Identity=29.004329004329, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786563, Length=233, Percent_Identity=31.3304721030043, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789672, Length=227, Percent_Identity=27.7533039647577, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1790467, Length=237, Percent_Identity=25.7383966244726, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1789864, Length=254, Percent_Identity=28.3464566929134, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1788165, Length=245, Percent_Identity=28.1632653061224, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI48994943, Length=237, Percent_Identity=27.8481012658228, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786872, Length=210, Percent_Identity=30.952380952381, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790739, Length=243, Percent_Identity=27.5720164609054, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1790534, Length=207, Percent_Identity=29.951690821256, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786345, Length=237, Percent_Identity=27.4261603375527, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786319, Length=261, Percent_Identity=26.8199233716475, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=29.3269230769231, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789873, Length=199, Percent_Identity=29.1457286432161, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788053, Length=212, Percent_Identity=28.7735849056604, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787792, Length=245, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1788472, Length=235, Percent_Identity=27.2340425531915, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1789751, Length=231, Percent_Identity=25.974025974026, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787143, Length=245, Percent_Identity=29.7959183673469, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1790525, Length=240, Percent_Identity=27.0833333333333, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789586, Length=257, Percent_Identity=25.2918287937743, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI48995001, Length=211, Percent_Identity=27.4881516587678, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787112, Length=244, Percent_Identity=27.8688524590164, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1789593, Length=238, Percent_Identity=23.9495798319328, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1786698, Length=235, Percent_Identity=27.2340425531915, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786654, Length=246, Percent_Identity=23.1707317073171, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1786253, Length=215, Percent_Identity=26.046511627907, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786803, Length=230, Percent_Identity=25.2173913043478, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788897, Length=244, Percent_Identity=25.4098360655738, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786981, Length=218, Percent_Identity=27.9816513761468, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=261, Percent_Identity=26.8199233716475, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17558664, Length=242, Percent_Identity=29.7520661157025, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71983510, Length=240, Percent_Identity=24.1666666666667, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71983523, Length=240, Percent_Identity=24.1666666666667, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71983516, Length=240, Percent_Identity=24.1666666666667, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17567265, Length=242, Percent_Identity=28.9256198347107, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193209708, Length=235, Percent_Identity=27.2340425531915, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17510237, Length=226, Percent_Identity=23.0088495575221, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32566680, Length=248, Percent_Identity=27.4193548387097, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=228, Percent_Identity=26.7543859649123, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=237, Percent_Identity=29.1139240506329, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=236, Percent_Identity=29.6610169491525, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=235, Percent_Identity=29.7872340425532, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=248, Percent_Identity=23.7903225806452, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=254, Percent_Identity=29.9212598425197, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17569081, Length=249, Percent_Identity=26.1044176706827, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17565586, Length=228, Percent_Identity=24.5614035087719, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=239, Percent_Identity=28.8702928870293, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193208177, Length=227, Percent_Identity=25.9911894273128, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115534520, Length=226, Percent_Identity=26.5486725663717, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992290, Length=231, Percent_Identity=27.7056277056277, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=245, Percent_Identity=27.3469387755102, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=247, Percent_Identity=28.7449392712551, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=222, Percent_Identity=26.5765765765766, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17567243, Length=228, Percent_Identity=27.1929824561404, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71992066, Length=261, Percent_Identity=23.7547892720307, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI86564969, Length=261, Percent_Identity=23.7547892720307, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71992070, Length=261, Percent_Identity=23.7547892720307, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI25146765, Length=261, Percent_Identity=23.7547892720307, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322980, Length=269, Percent_Identity=27.8810408921933, Blast_Score=81, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6324985, Length=236, Percent_Identity=26.6949152542373, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6319856, Length=230, Percent_Identity=25.6521739130435, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641565, Length=234, Percent_Identity=28.6324786324786, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI85726357, Length=256, Percent_Identity=26.171875, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17136662, Length=274, Percent_Identity=24.4525547445255, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574533, Length=211, Percent_Identity=27.9620853080569, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28573571, Length=278, Percent_Identity=24.4604316546763, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28573573, Length=278, Percent_Identity=24.4604316546763, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21357907, Length=256, Percent_Identity=26.171875, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28574744, Length=238, Percent_Identity=27.7310924369748, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24582014, Length=209, Percent_Identity=25.8373205741627, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582012, Length=209, Percent_Identity=25.8373205741627, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19920532, Length=239, Percent_Identity=25.5230125523013, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24580930, Length=239, Percent_Identity=25.5230125523013, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OPPD_HAEIN (P45052)

Other databases:

- EMBL:   L42023
- PIR:   C64184
- RefSeq:   NP_439278.1
- ProteinModelPortal:   P45052
- SMR:   P45052
- GeneID:   950089
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1121
- NMPDR:   fig|71421.1.peg.1077
- TIGR:   HI_1121
- HOGENOM:   HBG758042
- OMA:   TMEYGSA
- ProtClustDB:   PRK09473
- BioCyc:   HINF71421:HI_1121-MONOMER
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563
- SMART:   SM00382
- TIGRFAMs:   TIGR01727

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY

EC number: NA

Molecular weight: Translated: 35721; Mature: 35721

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLLDVKNLYVRFKTPDGVVTAVNDLNFTLNAGSTLGIVGESGSGKSQTAFALMGLLAA
CCCCCCCCEEEEEEECCCCEEEEEECCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHC
NGEVEGSAIFEGKELVNLPNAELNKIRAEQISMIFQDPMTSLNPYMKIGEQLMEVLQLHK
CCCCCCCEEECCHHHCCCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHC
GYDKQTAFAESVKMLDAVKMPEAKKRMGMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP
CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHCCCHHHHHHHHHHHHHCCCEEEECCC
TTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDQVMVMYAGRTMEYGTAEQ
CCEEEEEHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCC
IFYHPTHPYSIGLMDAIPRLDGNEEHLVTIPGNPPNLLHLPKGCPFSPRCQFATEQCQIA
EEECCCCCCEECHHHHHCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCHHHHEEC
PKLTTFNHGQLRNCWLSAEKFNL
CCEECCCCCCHHHHEECHHHCCC
>Mature Secondary Structure
MNPLLDVKNLYVRFKTPDGVVTAVNDLNFTLNAGSTLGIVGESGSGKSQTAFALMGLLAA
CCCCCCCCEEEEEEECCCCEEEEEECCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHC
NGEVEGSAIFEGKELVNLPNAELNKIRAEQISMIFQDPMTSLNPYMKIGEQLMEVLQLHK
CCCCCCCEEECCHHHCCCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHC
GYDKQTAFAESVKMLDAVKMPEAKKRMGMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP
CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHCCCHHHHHHHHHHHHHCCCEEEECCC
TTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDQVMVMYAGRTMEYGTAEQ
CCEEEEEHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCC
IFYHPTHPYSIGLMDAIPRLDGNEEHLVTIPGNPPNLLHLPKGCPFSPRCQFATEQCQIA
EEECCCCCCEECHHHHHCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCHHHHEEC
PKLTTFNHGQLRNCWLSAEKFNL
CCEECCCCCCHHHHEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800