Click here to switch to the map view.

The map label for this gene is ybhG [C]

Identifier: 162149600

GI number: 162149600

Start: 3920086

End: 3921069

Strand: Direct

Name: ybhG [C]

Synonym: GDI_3839

Alternate gene names: 162149600

Gene position: 3920086-3921069 (Clockwise)

Preceding gene: 162149596

Following gene: 162149601

Centisome position: 99.39

GC content: 76.42

Gene sequence:

>984_bases
ATGCGCCGGGCCGGCGTGGCCGGGGCGGCGGTGCTGCTGCTGGCGGCCGCCCTGTGGTGGGCGTGGTCGCGGCAGGCCGT
GCCGGTGGCGTGGCAGGGGTATGTCGATGCGGATTTCGTGCGGATCGGCCCGACGCAGGCCGGGCTGCTGACCGGGCTGC
GCGTCGCGCGGGGCGACCGGGTACGGGTGGGGCAGCCGCTGTTCGACCAGGACGACGTGGCCGAGCACGCGGCGCGCGAC
CAGGCGGTGCGCCAGGCCGAGGAAGGCGCACGCCAGTTGGCGAACCTGCAGGGCCCCGCCCGCGACACCGAGATCCGCCA
GGCGGCGTCCAACCTGGCGGATGCCGAGGCGACGCGCGACCGTGCGCGGGCCGACCTGCGCCGGCTGGAGGCGGCGGCCC
CGGCGGGCGCCGCGACGTTGCAGGCGCGCGACGCGGCCCGTGCCGCCTGGCGCTCGGCCGAGGCGCGCGTCGCGGGGCTG
CGCGCCGCGCTGGACCAGGCGCAGGCCCCCACCGGCCGGATGGAGCAGATCCGCGCGCAAGCGGCGACGGCGGGGGCGGC
GCGCGCGGCGCTGGCGATCATGGACTGGCGGCTGGCGCAGCGGCACGTCGTGGCGCCCGATGCGGGCGTCATCGCCGATA
TCCTGGCCTGGCCGGGCGAGGTGCTGGATGCCGGAACGCCCGTCATTTCGCTGTTGCCGCCGGACCATATCGTCATCCGC
CTGTTCGTGCCGGAGGGGATGCTGGCGCGCATCCACCCGGGCGACCGGGTGGGGCTGGCCTGTGACGGCTGCCCGCCGGG
GCTGGAGGGACAGGTGGATTTCATCGCACCGCGTGCCGAATACACGCCGCCGCTGATCTTCAGCGACCAGAGCCGGGCCA
AGCTGGTCTACCTGGTCCAGGCGCGACCGCGTGCCGACCAGGCGGGGATGCTGAATCCCGGCCAGCCGGTGACGGTCAGC
CCGGCATGGGCGCCCGCGCGATGA

Upstream 100 bases:

>100_bases
GCCGCGACGCGGCGGCGGGCGCGCTGTTATCGCGGCCTGAGGCATGCGCGAAAGGTCGGGCGATGGTCGGGGCGCTGGAA
ACGCGGTGACGCGCGCGGGC

Downstream 100 bases:

>100_bases
ACGGCGCGATGAACGGACCGAAACCCGAAGAGACTGGGGAGTACGTCATCGACGTGCGGGACCTGCGCAAGGATTTCGGG
ACGCAGCGCTTCAGCCTGTA

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MRRAGVAGAAVLLLAAALWWAWSRQAVPVAWQGYVDADFVRIGPTQAGLLTGLRVARGDRVRVGQPLFDQDDVAEHAARD
QAVRQAEEGARQLANLQGPARDTEIRQAASNLADAEATRDRARADLRRLEAAAPAGAATLQARDAARAAWRSAEARVAGL
RAALDQAQAPTGRMEQIRAQAATAGAARAALAIMDWRLAQRHVVAPDAGVIADILAWPGEVLDAGTPVISLLPPDHIVIR
LFVPEGMLARIHPGDRVGLACDGCPPGLEGQVDFIAPRAEYTPPLIFSDQSRAKLVYLVQARPRADQAGMLNPGQPVTVS
PAWAPAR

Sequences:

>Translated_327_residues
MRRAGVAGAAVLLLAAALWWAWSRQAVPVAWQGYVDADFVRIGPTQAGLLTGLRVARGDRVRVGQPLFDQDDVAEHAARD
QAVRQAEEGARQLANLQGPARDTEIRQAASNLADAEATRDRARADLRRLEAAAPAGAATLQARDAARAAWRSAEARVAGL
RAALDQAQAPTGRMEQIRAQAATAGAARAALAIMDWRLAQRHVVAPDAGVIADILAWPGEVLDAGTPVISLLPPDHIVIR
LFVPEGMLARIHPGDRVGLACDGCPPGLEGQVDFIAPRAEYTPPLIFSDQSRAKLVYLVQARPRADQAGMLNPGQPVTVS
PAWAPAR
>Mature_327_residues
MRRAGVAGAAVLLLAAALWWAWSRQAVPVAWQGYVDADFVRIGPTQAGLLTGLRVARGDRVRVGQPLFDQDDVAEHAARD
QAVRQAEEGARQLANLQGPARDTEIRQAASNLADAEATRDRARADLRRLEAAAPAGAATLQARDAARAAWRSAEARVAGL
RAALDQAQAPTGRMEQIRAQAATAGAARAALAIMDWRLAQRHVVAPDAGVIADILAWPGEVLDAGTPVISLLPPDHIVIR
LFVPEGMLARIHPGDRVGLACDGCPPGLEGQVDFIAPRAEYTPPLIFSDQSRAKLVYLVQARPRADQAGMLNPGQPVTVS
PAWAPAR

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1787013, Length=310, Percent_Identity=30.9677419354839, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1789900, Length=306, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 34754; Mature: 34754

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAGVAGAAVLLLAAALWWAWSRQAVPVAWQGYVDADFVRIGPTQAGLLTGLRVARGDR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCCHHHHHHHHHHHCCCC
VRVGQPLFDQDDVAEHAARDQAVRQAEEGARQLANLQGPARDTEIRQAASNLADAEATRD
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RARADLRRLEAAAPAGAATLQARDAARAAWRSAEARVAGLRAALDQAQAPTGRMEQIRAQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AATAGAARAALAIMDWRLAQRHVVAPDAGVIADILAWPGEVLDAGTPVISLLPPDHIVIR
HHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHHHCCCHHHHCCCCEEEECCCCEEEEE
LFVPEGMLARIHPGDRVGLACDGCPPGLEGQVDFIAPRAEYTPPLIFSDQSRAKLVYLVQ
EECCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCCEEEEEEE
ARPRADQAGMLNPGQPVTVSPAWAPAR
CCCCCCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MRRAGVAGAAVLLLAAALWWAWSRQAVPVAWQGYVDADFVRIGPTQAGLLTGLRVARGDR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCCHHHHHHHHHHHCCCC
VRVGQPLFDQDDVAEHAARDQAVRQAEEGARQLANLQGPARDTEIRQAASNLADAEATRD
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RARADLRRLEAAAPAGAATLQARDAARAAWRSAEARVAGLRAALDQAQAPTGRMEQIRAQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AATAGAARAALAIMDWRLAQRHVVAPDAGVIADILAWPGEVLDAGTPVISLLPPDHIVIR
HHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHHHCCCHHHHCCCCEEEECCCCEEEEE
LFVPEGMLARIHPGDRVGLACDGCPPGLEGQVDFIAPRAEYTPPLIFSDQSRAKLVYLVQ
EECCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCCEEEEEEE
ARPRADQAGMLNPGQPVTVSPAWAPAR
CCCCCCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA