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The map label for this gene is tonB

Identifier: 162149568

GI number: 162149568

Start: 3888945

End: 3891344

Strand: Direct

Name: tonB

Synonym: GDI_3807

Alternate gene names: NA

Gene position: 3888945-3891344 (Clockwise)

Preceding gene: 162149567

Following gene: 162149569

Centisome position: 98.6

GC content: 59.62

Gene sequence:

>2400_bases
ATGAAAACGCTCGGCCTGGTTCTGTTCTCGACGGTGGCTATCTGGGCTGGACGATCCTATGGGGCGGATGTCGCCGCCGC
GCCCCGCGCGTCCGGTGGACACAAGGTGGGCGGCGGCGCGGCGCGCGGCGTGACGACGCACGGTCAGGCGACGCACGGTC
AGGCGGCACGGCGACCGAAGGCGTCAGCCTTCCGGACCGCCCCGCCGGCTGTGGAGGCGATCGCGGTGTCGGCAAACCCG
CATGTCTCCCATGGTTCCGAACAGTTCGTTGGCCGCGACGTCATGGACCGCTTCGTGCCCGGGACCAGTCCGCTGCAGAT
TCTTGCCGCGACCACGCCAGGCGTCAGTTTCGGTTCGGATGATCCCTTCGGCCTGGATGGGGTTGCCAATACGCTGTACC
TGCGTGGGTTCACCCAGTCGCAGATCGGCGCGACCCTGGACGGCATTCCCCTGGGCGATCAGGGGTTCATGCAGTACAAC
GGCCTGGACATCAACGAAGCGGTAATCCAGGACAATATCTCGTCGATCGGTGTCTCGCAGGGCGCCGGGGCGGTGGATGT
GCCGTCGGCGCAGAACCTGGGCGGCGCGATCCGCTATTTCACCGCCGATCCGACGGACAGGACCGGGGGCAACCTGTCGC
AGACCTTCGGCAGCAATACGACGGTCCGCACGATGGGCAGCGTCGACAGTGGTGTCCTGAATGCGACGGGGACGAAATTC
CGCGCCAGCTTCGCTCGCACCGACGACAACAAATGGAAGGGATACGGCGACCAGCTGGAATACCAGGCGAATTTTAAACT
GGTCCAACCGATCCAGGATCGCGGCACGATCAGCGCGATTTTCAACTGGTCGGAATTCGACCAGTACAATTACATGAATT
ACAGTCTGAATATGCTGAAGAAATTCGGGGCGACGGGCTCCGACTTCCTGACGCCGAATTATGCGGAAGCCTATGAAGCC
GCGCTGGGCAATTATTCGTCGTCTATCGCCGCGCTGGGCAACGCGACCGACGAGTCCAATGCCACGCAATATGACGGTGC
GCAGATCCAGCGCAATTACCTGTCCGCGATCACCAGTCAACTGAGGCTGGCGCCGAACCTTGAAGAAAACACGGTGCTGT
ACGCCCACCTTTCCAGCGGCGATTACGAGGCTACCCCGACGTTCCCCTCACCGACCGGCGCGCCCTTTTCCCAGTTGGAC
AGTCATCAGGGTATCCGCAGGATCGGCTTCACGCAGTCCTTCCGTTATACCATCGCCCGGAATCACATCGATACCGGGGT
CTGGTACGAAAACAATTCTTACTGGTTCCCTGCCGAACTCTACAGTCAGCCGGCGCTCGGCCAGGGGCGCCCACGCAACG
CGCTGGGTCCCTTCGTCGACCCTTATGCCACTTGGTTTTCGGATTCCTTCAATACCAATACCTTTCAGTTCCATTTGCAG
GATACCTACGACATCCTGCCCCATCTTCAGATCAGCGCGGGGTTCCGGTCACTGATCGCCACGACGCATGGCGGCGCGGT
CTACAACAACCAGTCCCTGACCGGTCAGGCCGAACTTCCCCGTGGCGCTCTGACGGCGGCCAGTGCCTTCCTGCCACATG
TCGCGCTGGATTATCATTTTCGCGACCATCACGAATTCTATATCGACATCGCGGAAAACATGCGGGCCTATACCTATAAC
CCGTTCCTGATGTCGGACGGCGCGTGGTCGGTCGAAAACCAGTCCGAATTCCAGTCGGTGAAGACCAAGATCCGCCCCGA
GCGCACTTGGACCTATCTTGGCGGATATCGCTACAACAGCACGCTGATTTCTGCGCAGGCCGACGCCTATCACGTCGATT
ACTACAACCGGCTGGAAAACATCACGACCGGAACCCCGACTAATCCGATCAATTCCTTCGTCAACACGGGCAAGGAGACG
ATTACCGGCGTGGACGCGGCCGTGACGCTGCGTCCGGTCAGGGGGCTGGAATTCTTCAACAGCATGAGCTTCGCCAAGGA
ACAATATGGCGGCGGTGTCGACTACGAAGGAAAATATTACGACCTGAAAGGGAAGAACCAGGTCGGCTATCCGACATGGA
TGTACAAGACCAGCCTGTCCTATGCCTATCGTCGGGCACGGGTGAGCTTCAACGCGACCTATACCGGATCGCGCCCGCTG
TCCTATATGAACGATACCCATGTCTCACCCTACTGGCTGGCCGGGCTGTCCGCATCCTACGATTTCGGGTCGATCGGATT
CATGAAGAATCTGGGTGTCAGCTTTAACGTCTATAATCTTTTCAACACCACTTATGTCGGCGGCATGGGCCTTTTCGGCT
ATCCGATCTCGGGGGATTCTCCGACCTTATTCATCGGCGCGCCCCGTCAGTTCTTTGGCTCCGTGCGCGCGTCCTTCTGA

Upstream 100 bases:

>100_bases
GCATAAAAAAATGTTATTTATACAATCATCATTATGGCTGGTTGACGTAGGGCAGAACGTAATATAATAACAAAAAAATA
GTTAATTTGGAATTCAACGT

Downstream 100 bases:

>100_bases
CATGTCGTCAAGGACGCGGCACGGCACCGCGGCGGCGGGACGGTACGGACTGACGGCGGCCTTGATGCTGGAGGCCGCCG
AGCGGTTCAGCTTCTACGGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor Protein; Nb-Dependent Receptor; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor-Like Protein; NB Dependent Receptor Protein; Outer Membrane Heme Receptor

Number of amino acids: Translated: 799; Mature: 799

Protein sequence:

>799_residues
MKTLGLVLFSTVAIWAGRSYGADVAAAPRASGGHKVGGGAARGVTTHGQATHGQAARRPKASAFRTAPPAVEAIAVSANP
HVSHGSEQFVGRDVMDRFVPGTSPLQILAATTPGVSFGSDDPFGLDGVANTLYLRGFTQSQIGATLDGIPLGDQGFMQYN
GLDINEAVIQDNISSIGVSQGAGAVDVPSAQNLGGAIRYFTADPTDRTGGNLSQTFGSNTTVRTMGSVDSGVLNATGTKF
RASFARTDDNKWKGYGDQLEYQANFKLVQPIQDRGTISAIFNWSEFDQYNYMNYSLNMLKKFGATGSDFLTPNYAEAYEA
ALGNYSSSIAALGNATDESNATQYDGAQIQRNYLSAITSQLRLAPNLEENTVLYAHLSSGDYEATPTFPSPTGAPFSQLD
SHQGIRRIGFTQSFRYTIARNHIDTGVWYENNSYWFPAELYSQPALGQGRPRNALGPFVDPYATWFSDSFNTNTFQFHLQ
DTYDILPHLQISAGFRSLIATTHGGAVYNNQSLTGQAELPRGALTAASAFLPHVALDYHFRDHHEFYIDIAENMRAYTYN
PFLMSDGAWSVENQSEFQSVKTKIRPERTWTYLGGYRYNSTLISAQADAYHVDYYNRLENITTGTPTNPINSFVNTGKET
ITGVDAAVTLRPVRGLEFFNSMSFAKEQYGGGVDYEGKYYDLKGKNQVGYPTWMYKTSLSYAYRRARVSFNATYTGSRPL
SYMNDTHVSPYWLAGLSASYDFGSIGFMKNLGVSFNVYNLFNTTYVGGMGLFGYPISGDSPTLFIGAPRQFFGSVRASF

Sequences:

>Translated_799_residues
MKTLGLVLFSTVAIWAGRSYGADVAAAPRASGGHKVGGGAARGVTTHGQATHGQAARRPKASAFRTAPPAVEAIAVSANP
HVSHGSEQFVGRDVMDRFVPGTSPLQILAATTPGVSFGSDDPFGLDGVANTLYLRGFTQSQIGATLDGIPLGDQGFMQYN
GLDINEAVIQDNISSIGVSQGAGAVDVPSAQNLGGAIRYFTADPTDRTGGNLSQTFGSNTTVRTMGSVDSGVLNATGTKF
RASFARTDDNKWKGYGDQLEYQANFKLVQPIQDRGTISAIFNWSEFDQYNYMNYSLNMLKKFGATGSDFLTPNYAEAYEA
ALGNYSSSIAALGNATDESNATQYDGAQIQRNYLSAITSQLRLAPNLEENTVLYAHLSSGDYEATPTFPSPTGAPFSQLD
SHQGIRRIGFTQSFRYTIARNHIDTGVWYENNSYWFPAELYSQPALGQGRPRNALGPFVDPYATWFSDSFNTNTFQFHLQ
DTYDILPHLQISAGFRSLIATTHGGAVYNNQSLTGQAELPRGALTAASAFLPHVALDYHFRDHHEFYIDIAENMRAYTYN
PFLMSDGAWSVENQSEFQSVKTKIRPERTWTYLGGYRYNSTLISAQADAYHVDYYNRLENITTGTPTNPINSFVNTGKET
ITGVDAAVTLRPVRGLEFFNSMSFAKEQYGGGVDYEGKYYDLKGKNQVGYPTWMYKTSLSYAYRRARVSFNATYTGSRPL
SYMNDTHVSPYWLAGLSASYDFGSIGFMKNLGVSFNVYNLFNTTYVGGMGLFGYPISGDSPTLFIGAPRQFFGSVRASF
>Mature_799_residues
MKTLGLVLFSTVAIWAGRSYGADVAAAPRASGGHKVGGGAARGVTTHGQATHGQAARRPKASAFRTAPPAVEAIAVSANP
HVSHGSEQFVGRDVMDRFVPGTSPLQILAATTPGVSFGSDDPFGLDGVANTLYLRGFTQSQIGATLDGIPLGDQGFMQYN
GLDINEAVIQDNISSIGVSQGAGAVDVPSAQNLGGAIRYFTADPTDRTGGNLSQTFGSNTTVRTMGSVDSGVLNATGTKF
RASFARTDDNKWKGYGDQLEYQANFKLVQPIQDRGTISAIFNWSEFDQYNYMNYSLNMLKKFGATGSDFLTPNYAEAYEA
ALGNYSSSIAALGNATDESNATQYDGAQIQRNYLSAITSQLRLAPNLEENTVLYAHLSSGDYEATPTFPSPTGAPFSQLD
SHQGIRRIGFTQSFRYTIARNHIDTGVWYENNSYWFPAELYSQPALGQGRPRNALGPFVDPYATWFSDSFNTNTFQFHLQ
DTYDILPHLQISAGFRSLIATTHGGAVYNNQSLTGQAELPRGALTAASAFLPHVALDYHFRDHHEFYIDIAENMRAYTYN
PFLMSDGAWSVENQSEFQSVKTKIRPERTWTYLGGYRYNSTLISAQADAYHVDYYNRLENITTGTPTNPINSFVNTGKET
ITGVDAAVTLRPVRGLEFFNSMSFAKEQYGGGVDYEGKYYDLKGKNQVGYPTWMYKTSLSYAYRRARVSFNATYTGSRPL
SYMNDTHVSPYWLAGLSASYDFGSIGFMKNLGVSFNVYNLFNTTYVGGMGLFGYPISGDSPTLFIGAPRQFFGSVRASF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87241; Mature: 87241

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLGLVLFSTVAIWAGRSYGADVAAAPRASGGHKVGGGAARGVTTHGQATHGQAARRPK
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
ASAFRTAPPAVEAIAVSANPHVSHGSEQFVGRDVMDRFVPGTSPLQILAATTPGVSFGSD
CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
DPFGLDGVANTLYLRGFTQSQIGATLDGIPLGDQGFMQYNGLDINEAVIQDNISSIGVSQ
CCCCCCHHCCEEEEECCCHHHHCCEECCCCCCCCCCEEECCCCHHHHHHHCCHHHCCCCC
GAGAVDVPSAQNLGGAIRYFTADPTDRTGGNLSQTFGSNTTVRTMGSVDSGVLNATGTKF
CCCCEECCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCEEEEECCCCCCEEECCCCEE
RASFARTDDNKWKGYGDQLEYQANFKLVQPIQDRGTISAIFNWSEFDQYNYMNYSLNMLK
EEEEECCCCCCCCCCCCCEEEEECCEEECCCCCCCCEEEEECCHHHCCCCEEHHHHHHHH
KFGATGSDFLTPNYAEAYEAALGNYSSSIAALGNATDESNATQYDGAQIQRNYLSAITSQ
HHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LRLAPNLEENTVLYAHLSSGDYEATPTFPSPTGAPFSQLDSHQGIRRIGFTQSFRYTIAR
HHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCCHHEEEEEC
NHIDTGVWYENNSYWFPAELYSQPALGQGRPRNALGPFVDPYATWFSDSFNTNTFQFHLQ
CCCCCCEEECCCCEEECHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEC
DTYDILPHLQISAGFRSLIATTHGGAVYNNQSLTGQAELPRGALTAASAFLPHVALDYHF
CHHHCCCCEEEHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEE
RDHHEFYIDIAENMRAYTYNPFLMSDGAWSVENQSEFQSVKTKIRPERTWTYLGGYRYNS
CCCCEEEEEECCCCEEEEECCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCEEECC
TLISAQADAYHVDYYNRLENITTGTPTNPINSFVNTGKETITGVDAAVTLRPVRGLEFFN
EEEEECCCEEEEHHHHHHHCCCCCCCCCHHHHHHHCCHHHCCCCCEEEEEECCHHHHHHH
SMSFAKEQYGGGVDYEGKYYDLKGKNQVGYPTWMYKTSLSYAYRRARVSFNATYTGSRPL
HHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHEEEEEEEEECCCCCC
SYMNDTHVSPYWLAGLSASYDFGSIGFMKNLGVSFNVYNLFNTTYVGGMGLFGYPISGDS
CCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCEEEEEEECCCCEECCCCEEECCCCCCC
PTLFIGAPRQFFGSVRASF
CEEEEECCHHHHHHHHCCC
>Mature Secondary Structure
MKTLGLVLFSTVAIWAGRSYGADVAAAPRASGGHKVGGGAARGVTTHGQATHGQAARRPK
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
ASAFRTAPPAVEAIAVSANPHVSHGSEQFVGRDVMDRFVPGTSPLQILAATTPGVSFGSD
CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
DPFGLDGVANTLYLRGFTQSQIGATLDGIPLGDQGFMQYNGLDINEAVIQDNISSIGVSQ
CCCCCCHHCCEEEEECCCHHHHCCEECCCCCCCCCCEEECCCCHHHHHHHCCHHHCCCCC
GAGAVDVPSAQNLGGAIRYFTADPTDRTGGNLSQTFGSNTTVRTMGSVDSGVLNATGTKF
CCCCEECCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCEEEEECCCCCCEEECCCCEE
RASFARTDDNKWKGYGDQLEYQANFKLVQPIQDRGTISAIFNWSEFDQYNYMNYSLNMLK
EEEEECCCCCCCCCCCCCEEEEECCEEECCCCCCCCEEEEECCHHHCCCCEEHHHHHHHH
KFGATGSDFLTPNYAEAYEAALGNYSSSIAALGNATDESNATQYDGAQIQRNYLSAITSQ
HHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LRLAPNLEENTVLYAHLSSGDYEATPTFPSPTGAPFSQLDSHQGIRRIGFTQSFRYTIAR
HHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCCHHEEEEEC
NHIDTGVWYENNSYWFPAELYSQPALGQGRPRNALGPFVDPYATWFSDSFNTNTFQFHLQ
CCCCCCEEECCCCEEECHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEC
DTYDILPHLQISAGFRSLIATTHGGAVYNNQSLTGQAELPRGALTAASAFLPHVALDYHF
CHHHCCCCEEEHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEE
RDHHEFYIDIAENMRAYTYNPFLMSDGAWSVENQSEFQSVKTKIRPERTWTYLGGYRYNS
CCCCEEEEEECCCCEEEEECCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCEEECC
TLISAQADAYHVDYYNRLENITTGTPTNPINSFVNTGKETITGVDAAVTLRPVRGLEFFN
EEEEECCCEEEEHHHHHHHCCCCCCCCCHHHHHHHCCHHHCCCCCEEEEEECCHHHHHHH
SMSFAKEQYGGGVDYEGKYYDLKGKNQVGYPTWMYKTSLSYAYRRARVSFNATYTGSRPL
HHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHEEEEEEEEECCCCCC
SYMNDTHVSPYWLAGLSASYDFGSIGFMKNLGVSFNVYNLFNTTYVGGMGLFGYPISGDS
CCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCEEEEEEECCCCEECCCCEEECCCCCCC
PTLFIGAPRQFFGSVRASF
CEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA