Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is 162149342
Identifier: 162149342
GI number: 162149342
Start: 3667452
End: 3668516
Strand: Direct
Name: 162149342
Synonym: GDI_3575
Alternate gene names: NA
Gene position: 3667452-3668516 (Clockwise)
Preceding gene: 162149341
Following gene: 162149343
Centisome position: 92.98
GC content: 66.67
Gene sequence:
>1065_bases ATGGGGGATTACCAGGACCGAGATATCTGCTGCGCCGATCACGGCATTCCGACCAGCCGTCGGCGCTGGTTTGCGGTTGC CCGGCGGGATGGCCAGCCGATCGAATGGCCCGAGCAGACGCATGCGCCGGCGGACCAGGCGAAGGCCCGGGGTCTGCGGC CGTGGGTCGGGGCGCATACGATCATCGACTGGTCGATCCCAATGCAGTCGATTTTCGACCGGGCCAAGCCACTGGCCGCG AATACCAATCACCGGATCGCGGTCGGCCTGCGGAAATTCGTGCTGGAATCTCCCCGGCCGTTCATCATCCCGGTCTGCCA TTCATCGAATATCACGGCGCATGATGGCCTGGAGCCGCTCCGGACGATCACGACAGAGCGTGGCGGCGGGTTTGCAGTCG TGGTGCCGTCGTTCGTGGAGGAGCGGCGCGGCAATAGCGTAGGGCAGGACCTGGCCCAGCCGCTGGGCACTCAGACGCAG ATCCAGCACCATTCTGTGGTCGCCGCCTGGATGGTCCAGCACAATTTCACCGTGGCCGAGGGCGTGATCGGCGCCGGCAT GGACCAGCCGCTTTCGACACTGGTCACGCGCGGCACGCAGAAATATGTCGCGGCGGCCAGCCTAGCGAAGCTGCGCGGCA CCAGCACGGCGGCCGATATTCGTGAGCCGGTGCCGACCCTGTCCGCCGGCGGTAACCATATCGCGGCCGTCGCGGCGTTC CTGACCAAATATTACGGGCAGGGCGGCGTCGCCCAGGGCGCGGATGATCCGCTGCACTCCCTGACCACGCTCGCGCGGTT CGGCGTCGTCACCGTCCAGTTCCGGGGCGAGCCGCACGCGCTGTCCGACATCCTGATGCGGATGCTGGCACCGTCCGAGG CGGCCGCTGCGCATGAACTGACGCTGCCGGAATGGATCGAGATCGATGGCAAGCGCCGGCGGCTGACCAAGTCCGAAAGC ATGCGCCTGATCGGCAACAGCGTCCCCAAACGAATGGCCACCCTGCTGGCCCACGCAAACCGTGTCACCGCCCTCGATCG GGCGACGGTGATCGCTGCGGAGTGA
Upstream 100 bases:
>100_bases CAACCGCTTGACCAGCCCATAAAACATAGCAGAGATAACCAAAGGCCGGGTCAGTTCTCGATGAAAACCCAGGGTCAAAT CTCAGCAGAAATTAACACTG
Downstream 100 bases:
>100_bases TGATGATGAGTGATACCAACTCTTCGCCAGCGACACGCCTTCGGAAGGCGTGGAATGTGTCGGTGCGCGGATATGACCAT ACAGAGACCTATTTCGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Site-Specific DNA Methylase; DNA Cytosine Methyltransferase; Methylase; Cytosine-Specific Methylase; C-5 Cytosine-Specific DNA Methylase Family Protein; DNA-Methyltransferase; Prophage LambdaSo Type II DNA Methyltransferase; Prophage DNA Cytosine Methylase; DNA Methyltransferase; DNA Methylase; DNA Cytosine Methyltransferase Family Protein; C-5 Cytosine-Specific DNA Methylase Superfamily; Phage Protein
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MGDYQDRDICCADHGIPTSRRRWFAVARRDGQPIEWPEQTHAPADQAKARGLRPWVGAHTIIDWSIPMQSIFDRAKPLAA NTNHRIAVGLRKFVLESPRPFIIPVCHSSNITAHDGLEPLRTITTERGGGFAVVVPSFVEERRGNSVGQDLAQPLGTQTQ IQHHSVVAAWMVQHNFTVAEGVIGAGMDQPLSTLVTRGTQKYVAAASLAKLRGTSTAADIREPVPTLSAGGNHIAAVAAF LTKYYGQGGVAQGADDPLHSLTTLARFGVVTVQFRGEPHALSDILMRMLAPSEAAAAHELTLPEWIEIDGKRRRLTKSES MRLIGNSVPKRMATLLAHANRVTALDRATVIAAE
Sequences:
>Translated_354_residues MGDYQDRDICCADHGIPTSRRRWFAVARRDGQPIEWPEQTHAPADQAKARGLRPWVGAHTIIDWSIPMQSIFDRAKPLAA NTNHRIAVGLRKFVLESPRPFIIPVCHSSNITAHDGLEPLRTITTERGGGFAVVVPSFVEERRGNSVGQDLAQPLGTQTQ IQHHSVVAAWMVQHNFTVAEGVIGAGMDQPLSTLVTRGTQKYVAAASLAKLRGTSTAADIREPVPTLSAGGNHIAAVAAF LTKYYGQGGVAQGADDPLHSLTTLARFGVVTVQFRGEPHALSDILMRMLAPSEAAAAHELTLPEWIEIDGKRRRLTKSES MRLIGNSVPKRMATLLAHANRVTALDRATVIAAE >Mature_353_residues GDYQDRDICCADHGIPTSRRRWFAVARRDGQPIEWPEQTHAPADQAKARGLRPWVGAHTIIDWSIPMQSIFDRAKPLAAN TNHRIAVGLRKFVLESPRPFIIPVCHSSNITAHDGLEPLRTITTERGGGFAVVVPSFVEERRGNSVGQDLAQPLGTQTQI QHHSVVAAWMVQHNFTVAEGVIGAGMDQPLSTLVTRGTQKYVAAASLAKLRGTSTAADIREPVPTLSAGGNHIAAVAAFL TKYYGQGGVAQGADDPLHSLTTLARFGVVTVQFRGEPHALSDILMRMLAPSEAAAAHELTLPEWIEIDGKRRRLTKSESM RLIGNSVPKRMATLLAHANRVTALDRATVIAAE
Specific function: Unknown
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38406; Mature: 38275
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDYQDRDICCADHGIPTSRRRWFAVARRDGQPIEWPEQTHAPADQAKARGLRPWVGAHT CCCCCCCCEEECCCCCCCCCHHEEEEECCCCCCCCCCHHCCCCHHHHHHCCCCCCCCCCE IIDWSIPMQSIFDRAKPLAANTNHRIAVGLRKFVLESPRPFIIPVCHSSNITAHDGLEPL EEEECCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHH RTITTERGGGFAVVVPSFVEERRGNSVGQDLAQPLGTQTQIQHHSVVAAWMVQHNFTVAE HHHHCCCCCCEEEECCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH GVIGAGMDQPLSTLVTRGTQKYVAAASLAKLRGTSTAADIREPVPTLSAGGNHIAAVAAF HHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHH LTKYYGQGGVAQGADDPLHSLTTLARFGVVTVQFRGEPHALSDILMRMLAPSEAAAAHEL HHHHHCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHCC TLPEWIEIDGKRRRLTKSESMRLIGNSVPKRMATLLAHANRVTALDRATVIAAE CCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHCEEEEECC >Mature Secondary Structure GDYQDRDICCADHGIPTSRRRWFAVARRDGQPIEWPEQTHAPADQAKARGLRPWVGAHT CCCCCCCEEECCCCCCCCCHHEEEEECCCCCCCCCCHHCCCCHHHHHHCCCCCCCCCCE IIDWSIPMQSIFDRAKPLAANTNHRIAVGLRKFVLESPRPFIIPVCHSSNITAHDGLEPL EEEECCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHH RTITTERGGGFAVVVPSFVEERRGNSVGQDLAQPLGTQTQIQHHSVVAAWMVQHNFTVAE HHHHCCCCCCEEEECCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH GVIGAGMDQPLSTLVTRGTQKYVAAASLAKLRGTSTAADIREPVPTLSAGGNHIAAVAAF HHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHH LTKYYGQGGVAQGADDPLHSLTTLARFGVVTVQFRGEPHALSDILMRMLAPSEAAAAHEL HHHHHCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHCC TLPEWIEIDGKRRRLTKSESMRLIGNSVPKRMATLLAHANRVTALDRATVIAAE CCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA