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The map label for this gene is ctpA [H]

Identifier: 162149119

GI number: 162149119

Start: 3442976

End: 3444394

Strand: Direct

Name: ctpA [H]

Synonym: GDI_3349

Alternate gene names: 162149119

Gene position: 3442976-3444394 (Clockwise)

Preceding gene: 162149118

Following gene: 162149120

Centisome position: 87.29

GC content: 67.72

Gene sequence:

>1419_bases
ATGACGTTCCGCACCGGCCTGCTGCTTGGTTGCGCCTTTCTGGCAGGTATCGCCGCGGGTCCGCAGATCACCCACCTTCC
CGGCCTGGGGGGTGGCAACCTGACGTCCAACGCCCTGGCCGCCAGCCTGTCGAAGGACAGCGATTCACCGGCCGAGAATT
TCCGCCTGCTGTCGCTGTTCGGCCACGTGCTGGAACAGGTGAAGGCGAACTATGTCGATCCGGTCTCGAATCGCGACCTG
ATCATCAACGCGCTGAACGGCATGCTGAGCGGCCTGGACCCGCACAGCTCGTACATGACCGAAAAGCAGTACGGCGACCT
GCAGGTCCAGACCAAGGGCGAATTCGGCGGGCTGGGGCTGGAGGTGCAGGGCGAGGACAGCCATATCCGCGTCGTCTCGC
CGGTCGACGACACGCCGGCGGCGCGCGCCGGGATCAAGCCGGGCGACTACATCGTCGCGATCGACGGCAAGAACATCGAC
GGCCTGCCGCTGGACGAGGCCGTGGGGCGCATGCGCGGCAAGCCGGATACCAAGATCACCCTGACCCTGATCCGGGAAAA
GACGCCCAAGCCGATCGTCGTGACCATGACCCGCGCGATCATCCATATCCAGGTCATCCGATCGGCGCTGTACGACACGG
TGGGCTACATCCGCGTCTCGCAGTTCAACGAGGAGACCGGCCCGGGATTGGAAGCCGCGTTCCGCAAGCTGAAGGACGAA
GCCCACGGCCACCTGACCGGGCTGGTGCTGGACCTGCGGTCCGACCCGGGCGGGCTGCTGAACCAGGCGATCCAGGTCGG
GTCCGATTTCATCCGCAATGGCGAGATCGTTTCGACCCGCGCCCGCCATCCGCAGGAAAGCCAGCGGTGGGACGCGCACG
GCACCGACATCACCGACGACCTGCCGATGGTGGTGCTGATCAATGGCGGTTCGGCCTCGGCCAGCGAAATCGTCGCCGGC
GCGCTGCAGGACCACCAGCGCGCGGTGGTGGTGGGCGAAAAATCCTTCGGCAAGGGCTCGGTGCAGACCATCCTGCCCAT
CCCGGGCGACGGCGCGCTGCGGCTGACGACGGCGCGCTACTACACGCCCTCGGGCCGGTCCATCCAGGGGCTGGGCATCG
TGCCCGACGTGACAGTGCGCGAAACGCGCGAGGACCCGGCCTACAGCATCCGCGAGGCCGACCTCAGCCACATCATCAAG
AACCAGGGCGGCAATACCGCCAAGCCGCCGGCCCGCACCGACCTGCCCGCCATCGTGTCGTCCATCCCCGACGAGCCGCC
GGCGAACTGGCCGTCCTTCGACCCGACCAAGCCGGCCACCGACTTCCAGTTGCAGGAAGGGCTGAAGATCGTCCGCGCGA
TGGGAACGGGGCCGCGTTCGGCCGCCGCCGCCGTCCCCGCGGCGCCGCGTCATGACTGA

Upstream 100 bases:

>100_bases
AGATTGCCGAAAATGACTCCCCACGTGCCCTTTGGCACGTACCGCCGTCCACGGCCCCACGCCAGGGGCGGCGGGCGGCT
TCATTCAGGAGACGTACGGC

Downstream 100 bases:

>100_bases
CGCGGCGGACCTGCCCTATCGCCGCAATGTCGGTGCCATGCTGTTCAACGCCCAGGGCAGGATCCTGATCGGCCGCCGCA
CCGACCAGCCGGGCGCCGGC

Product: carboxy-terminal protease protein

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MTFRTGLLLGCAFLAGIAAGPQITHLPGLGGGNLTSNALAASLSKDSDSPAENFRLLSLFGHVLEQVKANYVDPVSNRDL
IINALNGMLSGLDPHSSYMTEKQYGDLQVQTKGEFGGLGLEVQGEDSHIRVVSPVDDTPAARAGIKPGDYIVAIDGKNID
GLPLDEAVGRMRGKPDTKITLTLIREKTPKPIVVTMTRAIIHIQVIRSALYDTVGYIRVSQFNEETGPGLEAAFRKLKDE
AHGHLTGLVLDLRSDPGGLLNQAIQVGSDFIRNGEIVSTRARHPQESQRWDAHGTDITDDLPMVVLINGGSASASEIVAG
ALQDHQRAVVVGEKSFGKGSVQTILPIPGDGALRLTTARYYTPSGRSIQGLGIVPDVTVRETREDPAYSIREADLSHIIK
NQGGNTAKPPARTDLPAIVSSIPDEPPANWPSFDPTKPATDFQLQEGLKIVRAMGTGPRSAAAAVPAAPRHD

Sequences:

>Translated_472_residues
MTFRTGLLLGCAFLAGIAAGPQITHLPGLGGGNLTSNALAASLSKDSDSPAENFRLLSLFGHVLEQVKANYVDPVSNRDL
IINALNGMLSGLDPHSSYMTEKQYGDLQVQTKGEFGGLGLEVQGEDSHIRVVSPVDDTPAARAGIKPGDYIVAIDGKNID
GLPLDEAVGRMRGKPDTKITLTLIREKTPKPIVVTMTRAIIHIQVIRSALYDTVGYIRVSQFNEETGPGLEAAFRKLKDE
AHGHLTGLVLDLRSDPGGLLNQAIQVGSDFIRNGEIVSTRARHPQESQRWDAHGTDITDDLPMVVLINGGSASASEIVAG
ALQDHQRAVVVGEKSFGKGSVQTILPIPGDGALRLTTARYYTPSGRSIQGLGIVPDVTVRETREDPAYSIREADLSHIIK
NQGGNTAKPPARTDLPAIVSSIPDEPPANWPSFDPTKPATDFQLQEGLKIVRAMGTGPRSAAAAVPAAPRHD
>Mature_471_residues
TFRTGLLLGCAFLAGIAAGPQITHLPGLGGGNLTSNALAASLSKDSDSPAENFRLLSLFGHVLEQVKANYVDPVSNRDLI
INALNGMLSGLDPHSSYMTEKQYGDLQVQTKGEFGGLGLEVQGEDSHIRVVSPVDDTPAARAGIKPGDYIVAIDGKNIDG
LPLDEAVGRMRGKPDTKITLTLIREKTPKPIVVTMTRAIIHIQVIRSALYDTVGYIRVSQFNEETGPGLEAAFRKLKDEA
HGHLTGLVLDLRSDPGGLLNQAIQVGSDFIRNGEIVSTRARHPQESQRWDAHGTDITDDLPMVVLINGGSASASEIVAGA
LQDHQRAVVVGEKSFGKGSVQTILPIPGDGALRLTTARYYTPSGRSIQGLGIVPDVTVRETREDPAYSIREADLSHIIKN
QGGNTAKPPARTDLPAIVSSIPDEPPANWPSFDPTKPATDFQLQEGLKIVRAMGTGPRSAAAAVPAAPRHD

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=329, Percent_Identity=28.5714285714286, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 50227; Mature: 50096

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRTGLLLGCAFLAGIAAGPQITHLPGLGGGNLTSNALAASLSKDSDSPAENFRLLSLF
CCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
GHVLEQVKANYVDPVSNRDLIINALNGMLSGLDPHSSYMTEKQYGDLQVQTKGEFGGLGL
HHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCEEE
EVQGEDSHIRVVSPVDDTPAARAGIKPGDYIVAIDGKNIDGLPLDEAVGRMRGKPDTKIT
EEECCCCEEEEECCCCCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEE
LTLIREKTPKPIVVTMTRAIIHIQVIRSALYDTVGYIRVSQFNEETGPGLEAAFRKLKDE
EEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHH
AHGHLTGLVLDLRSDPGGLLNQAIQVGSDFIRNGEIVSTRARHPQESQRWDAHGTDITDD
HCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCCCCCCCC
LPMVVLINGGSASASEIVAGALQDHQRAVVVGEKSFGKGSVQTILPIPGDGALRLTTARY
CCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEE
YTPSGRSIQGLGIVPDVTVRETREDPAYSIREADLSHIIKNQGGNTAKPPARTDLPAIVS
ECCCCCCEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
SIPDEPPANWPSFDPTKPATDFQLQEGLKIVRAMGTGPRSAAAAVPAAPRHD
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
TFRTGLLLGCAFLAGIAAGPQITHLPGLGGGNLTSNALAASLSKDSDSPAENFRLLSLF
CCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
GHVLEQVKANYVDPVSNRDLIINALNGMLSGLDPHSSYMTEKQYGDLQVQTKGEFGGLGL
HHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCEEE
EVQGEDSHIRVVSPVDDTPAARAGIKPGDYIVAIDGKNIDGLPLDEAVGRMRGKPDTKIT
EEECCCCEEEEECCCCCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEE
LTLIREKTPKPIVVTMTRAIIHIQVIRSALYDTVGYIRVSQFNEETGPGLEAAFRKLKDE
EEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHH
AHGHLTGLVLDLRSDPGGLLNQAIQVGSDFIRNGEIVSTRARHPQESQRWDAHGTDITDD
HCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCCCCCCCC
LPMVVLINGGSASASEIVAGALQDHQRAVVVGEKSFGKGSVQTILPIPGDGALRLTTARY
CCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEE
YTPSGRSIQGLGIVPDVTVRETREDPAYSIREADLSHIIKNQGGNTAKPPARTDLPAIVS
ECCCCCCEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
SIPDEPPANWPSFDPTKPATDFQLQEGLKIVRAMGTGPRSAAAAVPAAPRHD
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]