Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is imp [H]
Identifier: 162149097
GI number: 162149097
Start: 3418406
End: 3420760
Strand: Direct
Name: imp [H]
Synonym: GDI_3327
Alternate gene names: 162149097
Gene position: 3418406-3420760 (Clockwise)
Preceding gene: 162149096
Following gene: 162149098
Centisome position: 86.67
GC content: 63.78
Gene sequence:
>2355_bases ATGATGCCGATCCTGATGTCCCGTCGCCTGTTTCGCCCTGCCCGGGGCCAGCGTTCGCAGGCGCGTGGCACATTGCTGGC TGCCGGCCTGCTGGGCAGCACGTTCCTGGGCGCGGTCATCCAGGTTCACCGCGCCCATGCGCAGGTCCAGGCCAAGCCGA TCAAGATCACGACCGGCAGCCCCATGTCGCAGTCGGCCCCCGTCACGTTCCAGGCGGACACCGTCACCTACGACAACGCG CGGGGCATCGTGACCTGGACCGGCAACGTCCAGATCTGGCAGGAAGACCACGTCCTGCGCGCCGATACGGTGACGTACGA CCGCAATACCGGCATCGCCGCCGCCCACGGCCACGTCGCGATGGTGGAACCCGACGGCACGGTCATCTTCAGCGACTACG CCGAACTCAGCAACGGCATGCGCGACGGCATCATGACCCGCCTGCATATGCTGATGACCGAAAACGCCAAGCTGGCGGCC AACGGCATGCGGCGCACCGGGGCCAAGGTCAACGACATGGCGCGCGCCGTCTACACGGCCTGCAACATCTGCGCCCAGCA TCCCGAACGGCCGCCCTTCTGGCAGTTGCGGGCCTATGACGCGATCGACGATACCGAACACAAGCGCATCGACTTCCGTG ACGCCTATCTGGACATGTTCGGCATTCCGGTCATGTACATGCCCGCCTTTTCGATGTCCGACCCGTCGGTCAAGCGGCAG AGCGGCTTCCTGACGCCGGGGATCACGCCGCATGACCGCTATCTGGGCGCCTATGTCACCATCCCCTATTACTGGGTGAT CGACAAACAGTCCGACATGACGATCCAGGGTCTGCTGTCCACCCGGACGGGCCCCCAGGTCAGCACCCAGTACCGCAACG CGCTGAATTTCGGCACGCTGAACATCCTGGCCGGCCTGGCCTACGACACCAACCGCCAGGGGTCGTACGTGAACACCTTC GGCAACACCACGGGCACGTCCGACGAGCACGGCATACAGGGCTACATCTTCGCCCAGGCGCAGGCGTCGATCACGCGCGC CTGGCGCGCGGGGGCGAACATCAACCTGGCCACGTCGGCCGACTACATGCGCGACTATCGCGTGTCCGGCTACGGCCAGG AAATGCTGACCTCGAACGTCTATCTCGAAGGGTTCGGAACCGGGTCCTATTCGCGCGTCGACGCCCAGGCCTACCAGGGC CTGAACCAGGGCGTCATCCGCGACAACGAACTGCCGTGGGTGCTGCCGCGCTACACCTACAGCTATTTCGGCCAGCCCGA CGCGTGGGGCGGCCGGCTGGCGGTGGATACCACCGATTTCTACGTCTATCGCGCATCCGGCGTCTCGGACCAGCGCGGGC AGCTCTCGCTGAACTGGGACCGGCCGTTCCGCAACCATCTGGGCCAGCTCTGGAAGCTGACCCTGCACCTGGAATCGGCC ATCCACCGGGCGACCAGCCTGAACCAGCAGCCGATCTACGCCCCGACCACGACCCGCCAGCAGATCACGGGCCAGGTCCT GCCGACGGTCGCGCTGAAGATGAACTGGCCGTTCCTGCGGGGCTTCATGAACGGCAAGGGCACCCAGATCCTAGAACCCA TCGCCCAGGTCATCGCGGCGCCCAACACCGGCAACAGCCGCAACAGCAACCTGCCGAACGAAGACAGCCTGTCCTACGAA TTCACCGATTCGACGCTGTTCGCGATCAACCGCTACCCGGGGACCGACCGGCTGGACGGCGGCCTGCGCGGCAATTTCGG CGTGCATGGCAACTGGACGTGGAACGGGCATGAAATCGATACGCTGGTCGGCGAAAGCCTCCAGGAGCATATCGACCACA ACCGCATTCCCTATTCCGGGCTGAACCACCATTTTTCCGACGTGGTGGCGCGCGCGCGCTTCGCGCCGAACCAGTATATC GACTTCACCGGCCGCACCCGGATCGACCCGTATGCCGGCCGGATCGATTTCGGCGACGCGCTGGTCAGCACCGGGGTAAA GCATTTCCACCTGACCAGCGGCTATGTCTACGAACCGGTGACGCCGTATTATTATTATGCCACCAACATCCAGACGGCGA GCCCCAACGCGGCCTATTATGTGCGCACGAACGAGGTGACGGTCGGTGCCAACACCAACTGGCAGAACTACAGCCTGTCG GCCTTCGTCCGCCGCAGCCTGTCGCGCCAGCAATTCGTCAGCATGGGCGGCAACGCCGGCTACAACAATGACTGTTTCGG CTTCAACCTGATGTATATCAAGCAATATACGTCGATCGGCGGCCAACAGCGCAATTCGACCATCATGTTCACCCTGACCT TCAAGACCATCGGTGCCTTTGGTATTCGTGGCTGA
Upstream 100 bases:
>100_bases TCGGCGAATCCGGGGCGATGCCGCCGCTGCTGGCCGCCTGGGCCCCGACCGGAGCAGGACTCTGCCTTGCAGTTTCTCTG CTGCTTCATCTAGAAGACGG
Downstream 100 bases:
>100_bases TCCGATGCGTGAGAGACCGAGCAGAATGCGACGCCGCCCCACCAAGACCGGTTTTTCCTCGAATGTCATGGCATGCCTGC TGGCGGCCGGGCTGGCGGCC
Product: organic solvent tolerance protein
Products: NA
Alternate protein names: Organic solvent tolerance protein [H]
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MMPILMSRRLFRPARGQRSQARGTLLAAGLLGSTFLGAVIQVHRAHAQVQAKPIKITTGSPMSQSAPVTFQADTVTYDNA RGIVTWTGNVQIWQEDHVLRADTVTYDRNTGIAAAHGHVAMVEPDGTVIFSDYAELSNGMRDGIMTRLHMLMTENAKLAA NGMRRTGAKVNDMARAVYTACNICAQHPERPPFWQLRAYDAIDDTEHKRIDFRDAYLDMFGIPVMYMPAFSMSDPSVKRQ SGFLTPGITPHDRYLGAYVTIPYYWVIDKQSDMTIQGLLSTRTGPQVSTQYRNALNFGTLNILAGLAYDTNRQGSYVNTF GNTTGTSDEHGIQGYIFAQAQASITRAWRAGANINLATSADYMRDYRVSGYGQEMLTSNVYLEGFGTGSYSRVDAQAYQG LNQGVIRDNELPWVLPRYTYSYFGQPDAWGGRLAVDTTDFYVYRASGVSDQRGQLSLNWDRPFRNHLGQLWKLTLHLESA IHRATSLNQQPIYAPTTTRQQITGQVLPTVALKMNWPFLRGFMNGKGTQILEPIAQVIAAPNTGNSRNSNLPNEDSLSYE FTDSTLFAINRYPGTDRLDGGLRGNFGVHGNWTWNGHEIDTLVGESLQEHIDHNRIPYSGLNHHFSDVVARARFAPNQYI DFTGRTRIDPYAGRIDFGDALVSTGVKHFHLTSGYVYEPVTPYYYYATNIQTASPNAAYYVRTNEVTVGANTNWQNYSLS AFVRRSLSRQQFVSMGGNAGYNNDCFGFNLMYIKQYTSIGGQQRNSTIMFTLTFKTIGAFGIRG
Sequences:
>Translated_784_residues MMPILMSRRLFRPARGQRSQARGTLLAAGLLGSTFLGAVIQVHRAHAQVQAKPIKITTGSPMSQSAPVTFQADTVTYDNA RGIVTWTGNVQIWQEDHVLRADTVTYDRNTGIAAAHGHVAMVEPDGTVIFSDYAELSNGMRDGIMTRLHMLMTENAKLAA NGMRRTGAKVNDMARAVYTACNICAQHPERPPFWQLRAYDAIDDTEHKRIDFRDAYLDMFGIPVMYMPAFSMSDPSVKRQ SGFLTPGITPHDRYLGAYVTIPYYWVIDKQSDMTIQGLLSTRTGPQVSTQYRNALNFGTLNILAGLAYDTNRQGSYVNTF GNTTGTSDEHGIQGYIFAQAQASITRAWRAGANINLATSADYMRDYRVSGYGQEMLTSNVYLEGFGTGSYSRVDAQAYQG LNQGVIRDNELPWVLPRYTYSYFGQPDAWGGRLAVDTTDFYVYRASGVSDQRGQLSLNWDRPFRNHLGQLWKLTLHLESA IHRATSLNQQPIYAPTTTRQQITGQVLPTVALKMNWPFLRGFMNGKGTQILEPIAQVIAAPNTGNSRNSNLPNEDSLSYE FTDSTLFAINRYPGTDRLDGGLRGNFGVHGNWTWNGHEIDTLVGESLQEHIDHNRIPYSGLNHHFSDVVARARFAPNQYI DFTGRTRIDPYAGRIDFGDALVSTGVKHFHLTSGYVYEPVTPYYYYATNIQTASPNAAYYVRTNEVTVGANTNWQNYSLS AFVRRSLSRQQFVSMGGNAGYNNDCFGFNLMYIKQYTSIGGQQRNSTIMFTLTFKTIGAFGIRG >Mature_784_residues MMPILMSRRLFRPARGQRSQARGTLLAAGLLGSTFLGAVIQVHRAHAQVQAKPIKITTGSPMSQSAPVTFQADTVTYDNA RGIVTWTGNVQIWQEDHVLRADTVTYDRNTGIAAAHGHVAMVEPDGTVIFSDYAELSNGMRDGIMTRLHMLMTENAKLAA NGMRRTGAKVNDMARAVYTACNICAQHPERPPFWQLRAYDAIDDTEHKRIDFRDAYLDMFGIPVMYMPAFSMSDPSVKRQ SGFLTPGITPHDRYLGAYVTIPYYWVIDKQSDMTIQGLLSTRTGPQVSTQYRNALNFGTLNILAGLAYDTNRQGSYVNTF GNTTGTSDEHGIQGYIFAQAQASITRAWRAGANINLATSADYMRDYRVSGYGQEMLTSNVYLEGFGTGSYSRVDAQAYQG LNQGVIRDNELPWVLPRYTYSYFGQPDAWGGRLAVDTTDFYVYRASGVSDQRGQLSLNWDRPFRNHLGQLWKLTLHLESA IHRATSLNQQPIYAPTTTRQQITGQVLPTVALKMNWPFLRGFMNGKGTQILEPIAQVIAAPNTGNSRNSNLPNEDSLSYE FTDSTLFAINRYPGTDRLDGGLRGNFGVHGNWTWNGHEIDTLVGESLQEHIDHNRIPYSGLNHHFSDVVARARFAPNQYI DFTGRTRIDPYAGRIDFGDALVSTGVKHFHLTSGYVYEPVTPYYYYATNIQTASPNAAYYVRTNEVTVGANTNWQNYSLS AFVRRSLSRQQFVSMGGNAGYNNDCFGFNLMYIKQYTSIGGQQRNSTIMFTLTFKTIGAFGIRG
Specific function: Involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis [H]
COG id: COG1452
COG function: function code M; Organic solvent tolerance protein OstA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020889 - InterPro: IPR007543 [H]
Pfam domain/function: PF04453 OstA_C [H]
EC number: NA
Molecular weight: Translated: 87547; Mature: 87547
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPILMSRRLFRPARGQRSQARGTLLAAGLLGSTFLGAVIQVHRAHAQVQAKPIKITTGS CCCHHHHHHHCCCCCCCCHHHCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC PMSQSAPVTFQADTVTYDNARGIVTWTGNVQIWQEDHVLRADTVTYDRNTGIAAAHGHVA CCCCCCCEEEEECEEEECCCCEEEEEECCEEEEECCCEEEEEEEEEECCCCEEEECCCEE MVEPDGTVIFSDYAELSNGMRDGIMTRLHMLMTENAKLAANGMRRTGAKVNDMARAVYTA EECCCCCEEEECHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHCCCCHHHHHHHHHHH CNICAQHPERPPFWQLRAYDAIDDTEHKRIDFRDAYLDMFGIPVMYMPAFSMSDPSVKRQ HHHHHCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHCCCEEEECCCCCCCCCCHHH SGFLTPGITPHDRYLGAYVTIPYYWVIDKQSDMTIQGLLSTRTGPQVSTQYRNALNFGTL CCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCHH NILAGLAYDTNRQGSYVNTFGNTTGTSDEHGIQGYIFAQAQASITRAWRAGANINLATSA HHHEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCEEEEECH DYMRDYRVSGYGQEMLTSNVYLEGFGTGSYSRVDAQAYQGLNQGVIRDNELPWVLPRYTY HHHHHCCCCCCCHHHHCCCEEEEEECCCCCCEECHHHHCCCCCCCEECCCCCEEECCCCH SYFGQPDAWGGRLAVDTTDFYVYRASGVSDQRGQLSLNWDRPFRNHLGQLWKLTLHLESA HHCCCCCCCCCEEEEEECEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH IHRATSLNQQPIYAPTTTRQQITGQVLPTVALKMNWPFLRGFMNGKGTQILEPIAQVIAA HHHHHCCCCCCEECCCCCHHHHCCCCCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHCC PNTGNSRNSNLPNEDSLSYEFTDSTLFAINRYPGTDRLDGGLRGNFGVHGNWTWNGHEID CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCHH TLVGESLQEHIDHNRIPYSGLNHHFSDVVARARFAPNQYIDFTGRTRIDPYAGRIDFGDA HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHH LVSTGVKHFHLTSGYVYEPVTPYYYYATNIQTASPNAAYYVRTNEVTVGANTNWQNYSLS HHHCCCEEEEEECCEEECCCCCEEEEEEEEEECCCCEEEEEEECEEEECCCCCCCCCCHH AFVRRSLSRQQFVSMGGNAGYNNDCFGFNLMYIKQYTSIGGQQRNSTIMFTLTFKTIGAF HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCEEEEEEEEHHHCCC GIRG CCCC >Mature Secondary Structure MMPILMSRRLFRPARGQRSQARGTLLAAGLLGSTFLGAVIQVHRAHAQVQAKPIKITTGS CCCHHHHHHHCCCCCCCCHHHCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC PMSQSAPVTFQADTVTYDNARGIVTWTGNVQIWQEDHVLRADTVTYDRNTGIAAAHGHVA CCCCCCCEEEEECEEEECCCCEEEEEECCEEEEECCCEEEEEEEEEECCCCEEEECCCEE MVEPDGTVIFSDYAELSNGMRDGIMTRLHMLMTENAKLAANGMRRTGAKVNDMARAVYTA EECCCCCEEEECHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHCCCCHHHHHHHHHHH CNICAQHPERPPFWQLRAYDAIDDTEHKRIDFRDAYLDMFGIPVMYMPAFSMSDPSVKRQ HHHHHCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHCCCEEEECCCCCCCCCCHHH SGFLTPGITPHDRYLGAYVTIPYYWVIDKQSDMTIQGLLSTRTGPQVSTQYRNALNFGTL CCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCHH NILAGLAYDTNRQGSYVNTFGNTTGTSDEHGIQGYIFAQAQASITRAWRAGANINLATSA HHHEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCEEEEECH DYMRDYRVSGYGQEMLTSNVYLEGFGTGSYSRVDAQAYQGLNQGVIRDNELPWVLPRYTY HHHHHCCCCCCCHHHHCCCEEEEEECCCCCCEECHHHHCCCCCCCEECCCCCEEECCCCH SYFGQPDAWGGRLAVDTTDFYVYRASGVSDQRGQLSLNWDRPFRNHLGQLWKLTLHLESA HHCCCCCCCCCEEEEEECEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH IHRATSLNQQPIYAPTTTRQQITGQVLPTVALKMNWPFLRGFMNGKGTQILEPIAQVIAA HHHHHCCCCCCEECCCCCHHHHCCCCCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHCC PNTGNSRNSNLPNEDSLSYEFTDSTLFAINRYPGTDRLDGGLRGNFGVHGNWTWNGHEID CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCHH TLVGESLQEHIDHNRIPYSGLNHHFSDVVARARFAPNQYIDFTGRTRIDPYAGRIDFGDA HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHH LVSTGVKHFHLTSGYVYEPVTPYYYYATNIQTASPNAAYYVRTNEVTVGANTNWQNYSLS HHHCCCEEEEEECCEEECCCCCEEEEEEEEEECCCCEEEEEEECEEEECCCCCCCCCCHH AFVRRSLSRQQFVSMGGNAGYNNDCFGFNLMYIKQYTSIGGQQRNSTIMFTLTFKTIGAF HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCEEEEEEEEHHHCCC GIRG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA