Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is imp [H]

Identifier: 162149097

GI number: 162149097

Start: 3418406

End: 3420760

Strand: Direct

Name: imp [H]

Synonym: GDI_3327

Alternate gene names: 162149097

Gene position: 3418406-3420760 (Clockwise)

Preceding gene: 162149096

Following gene: 162149098

Centisome position: 86.67

GC content: 63.78

Gene sequence:

>2355_bases
ATGATGCCGATCCTGATGTCCCGTCGCCTGTTTCGCCCTGCCCGGGGCCAGCGTTCGCAGGCGCGTGGCACATTGCTGGC
TGCCGGCCTGCTGGGCAGCACGTTCCTGGGCGCGGTCATCCAGGTTCACCGCGCCCATGCGCAGGTCCAGGCCAAGCCGA
TCAAGATCACGACCGGCAGCCCCATGTCGCAGTCGGCCCCCGTCACGTTCCAGGCGGACACCGTCACCTACGACAACGCG
CGGGGCATCGTGACCTGGACCGGCAACGTCCAGATCTGGCAGGAAGACCACGTCCTGCGCGCCGATACGGTGACGTACGA
CCGCAATACCGGCATCGCCGCCGCCCACGGCCACGTCGCGATGGTGGAACCCGACGGCACGGTCATCTTCAGCGACTACG
CCGAACTCAGCAACGGCATGCGCGACGGCATCATGACCCGCCTGCATATGCTGATGACCGAAAACGCCAAGCTGGCGGCC
AACGGCATGCGGCGCACCGGGGCCAAGGTCAACGACATGGCGCGCGCCGTCTACACGGCCTGCAACATCTGCGCCCAGCA
TCCCGAACGGCCGCCCTTCTGGCAGTTGCGGGCCTATGACGCGATCGACGATACCGAACACAAGCGCATCGACTTCCGTG
ACGCCTATCTGGACATGTTCGGCATTCCGGTCATGTACATGCCCGCCTTTTCGATGTCCGACCCGTCGGTCAAGCGGCAG
AGCGGCTTCCTGACGCCGGGGATCACGCCGCATGACCGCTATCTGGGCGCCTATGTCACCATCCCCTATTACTGGGTGAT
CGACAAACAGTCCGACATGACGATCCAGGGTCTGCTGTCCACCCGGACGGGCCCCCAGGTCAGCACCCAGTACCGCAACG
CGCTGAATTTCGGCACGCTGAACATCCTGGCCGGCCTGGCCTACGACACCAACCGCCAGGGGTCGTACGTGAACACCTTC
GGCAACACCACGGGCACGTCCGACGAGCACGGCATACAGGGCTACATCTTCGCCCAGGCGCAGGCGTCGATCACGCGCGC
CTGGCGCGCGGGGGCGAACATCAACCTGGCCACGTCGGCCGACTACATGCGCGACTATCGCGTGTCCGGCTACGGCCAGG
AAATGCTGACCTCGAACGTCTATCTCGAAGGGTTCGGAACCGGGTCCTATTCGCGCGTCGACGCCCAGGCCTACCAGGGC
CTGAACCAGGGCGTCATCCGCGACAACGAACTGCCGTGGGTGCTGCCGCGCTACACCTACAGCTATTTCGGCCAGCCCGA
CGCGTGGGGCGGCCGGCTGGCGGTGGATACCACCGATTTCTACGTCTATCGCGCATCCGGCGTCTCGGACCAGCGCGGGC
AGCTCTCGCTGAACTGGGACCGGCCGTTCCGCAACCATCTGGGCCAGCTCTGGAAGCTGACCCTGCACCTGGAATCGGCC
ATCCACCGGGCGACCAGCCTGAACCAGCAGCCGATCTACGCCCCGACCACGACCCGCCAGCAGATCACGGGCCAGGTCCT
GCCGACGGTCGCGCTGAAGATGAACTGGCCGTTCCTGCGGGGCTTCATGAACGGCAAGGGCACCCAGATCCTAGAACCCA
TCGCCCAGGTCATCGCGGCGCCCAACACCGGCAACAGCCGCAACAGCAACCTGCCGAACGAAGACAGCCTGTCCTACGAA
TTCACCGATTCGACGCTGTTCGCGATCAACCGCTACCCGGGGACCGACCGGCTGGACGGCGGCCTGCGCGGCAATTTCGG
CGTGCATGGCAACTGGACGTGGAACGGGCATGAAATCGATACGCTGGTCGGCGAAAGCCTCCAGGAGCATATCGACCACA
ACCGCATTCCCTATTCCGGGCTGAACCACCATTTTTCCGACGTGGTGGCGCGCGCGCGCTTCGCGCCGAACCAGTATATC
GACTTCACCGGCCGCACCCGGATCGACCCGTATGCCGGCCGGATCGATTTCGGCGACGCGCTGGTCAGCACCGGGGTAAA
GCATTTCCACCTGACCAGCGGCTATGTCTACGAACCGGTGACGCCGTATTATTATTATGCCACCAACATCCAGACGGCGA
GCCCCAACGCGGCCTATTATGTGCGCACGAACGAGGTGACGGTCGGTGCCAACACCAACTGGCAGAACTACAGCCTGTCG
GCCTTCGTCCGCCGCAGCCTGTCGCGCCAGCAATTCGTCAGCATGGGCGGCAACGCCGGCTACAACAATGACTGTTTCGG
CTTCAACCTGATGTATATCAAGCAATATACGTCGATCGGCGGCCAACAGCGCAATTCGACCATCATGTTCACCCTGACCT
TCAAGACCATCGGTGCCTTTGGTATTCGTGGCTGA

Upstream 100 bases:

>100_bases
TCGGCGAATCCGGGGCGATGCCGCCGCTGCTGGCCGCCTGGGCCCCGACCGGAGCAGGACTCTGCCTTGCAGTTTCTCTG
CTGCTTCATCTAGAAGACGG

Downstream 100 bases:

>100_bases
TCCGATGCGTGAGAGACCGAGCAGAATGCGACGCCGCCCCACCAAGACCGGTTTTTCCTCGAATGTCATGGCATGCCTGC
TGGCGGCCGGGCTGGCGGCC

Product: organic solvent tolerance protein

Products: NA

Alternate protein names: Organic solvent tolerance protein [H]

Number of amino acids: Translated: 784; Mature: 784

Protein sequence:

>784_residues
MMPILMSRRLFRPARGQRSQARGTLLAAGLLGSTFLGAVIQVHRAHAQVQAKPIKITTGSPMSQSAPVTFQADTVTYDNA
RGIVTWTGNVQIWQEDHVLRADTVTYDRNTGIAAAHGHVAMVEPDGTVIFSDYAELSNGMRDGIMTRLHMLMTENAKLAA
NGMRRTGAKVNDMARAVYTACNICAQHPERPPFWQLRAYDAIDDTEHKRIDFRDAYLDMFGIPVMYMPAFSMSDPSVKRQ
SGFLTPGITPHDRYLGAYVTIPYYWVIDKQSDMTIQGLLSTRTGPQVSTQYRNALNFGTLNILAGLAYDTNRQGSYVNTF
GNTTGTSDEHGIQGYIFAQAQASITRAWRAGANINLATSADYMRDYRVSGYGQEMLTSNVYLEGFGTGSYSRVDAQAYQG
LNQGVIRDNELPWVLPRYTYSYFGQPDAWGGRLAVDTTDFYVYRASGVSDQRGQLSLNWDRPFRNHLGQLWKLTLHLESA
IHRATSLNQQPIYAPTTTRQQITGQVLPTVALKMNWPFLRGFMNGKGTQILEPIAQVIAAPNTGNSRNSNLPNEDSLSYE
FTDSTLFAINRYPGTDRLDGGLRGNFGVHGNWTWNGHEIDTLVGESLQEHIDHNRIPYSGLNHHFSDVVARARFAPNQYI
DFTGRTRIDPYAGRIDFGDALVSTGVKHFHLTSGYVYEPVTPYYYYATNIQTASPNAAYYVRTNEVTVGANTNWQNYSLS
AFVRRSLSRQQFVSMGGNAGYNNDCFGFNLMYIKQYTSIGGQQRNSTIMFTLTFKTIGAFGIRG

Sequences:

>Translated_784_residues
MMPILMSRRLFRPARGQRSQARGTLLAAGLLGSTFLGAVIQVHRAHAQVQAKPIKITTGSPMSQSAPVTFQADTVTYDNA
RGIVTWTGNVQIWQEDHVLRADTVTYDRNTGIAAAHGHVAMVEPDGTVIFSDYAELSNGMRDGIMTRLHMLMTENAKLAA
NGMRRTGAKVNDMARAVYTACNICAQHPERPPFWQLRAYDAIDDTEHKRIDFRDAYLDMFGIPVMYMPAFSMSDPSVKRQ
SGFLTPGITPHDRYLGAYVTIPYYWVIDKQSDMTIQGLLSTRTGPQVSTQYRNALNFGTLNILAGLAYDTNRQGSYVNTF
GNTTGTSDEHGIQGYIFAQAQASITRAWRAGANINLATSADYMRDYRVSGYGQEMLTSNVYLEGFGTGSYSRVDAQAYQG
LNQGVIRDNELPWVLPRYTYSYFGQPDAWGGRLAVDTTDFYVYRASGVSDQRGQLSLNWDRPFRNHLGQLWKLTLHLESA
IHRATSLNQQPIYAPTTTRQQITGQVLPTVALKMNWPFLRGFMNGKGTQILEPIAQVIAAPNTGNSRNSNLPNEDSLSYE
FTDSTLFAINRYPGTDRLDGGLRGNFGVHGNWTWNGHEIDTLVGESLQEHIDHNRIPYSGLNHHFSDVVARARFAPNQYI
DFTGRTRIDPYAGRIDFGDALVSTGVKHFHLTSGYVYEPVTPYYYYATNIQTASPNAAYYVRTNEVTVGANTNWQNYSLS
AFVRRSLSRQQFVSMGGNAGYNNDCFGFNLMYIKQYTSIGGQQRNSTIMFTLTFKTIGAFGIRG
>Mature_784_residues
MMPILMSRRLFRPARGQRSQARGTLLAAGLLGSTFLGAVIQVHRAHAQVQAKPIKITTGSPMSQSAPVTFQADTVTYDNA
RGIVTWTGNVQIWQEDHVLRADTVTYDRNTGIAAAHGHVAMVEPDGTVIFSDYAELSNGMRDGIMTRLHMLMTENAKLAA
NGMRRTGAKVNDMARAVYTACNICAQHPERPPFWQLRAYDAIDDTEHKRIDFRDAYLDMFGIPVMYMPAFSMSDPSVKRQ
SGFLTPGITPHDRYLGAYVTIPYYWVIDKQSDMTIQGLLSTRTGPQVSTQYRNALNFGTLNILAGLAYDTNRQGSYVNTF
GNTTGTSDEHGIQGYIFAQAQASITRAWRAGANINLATSADYMRDYRVSGYGQEMLTSNVYLEGFGTGSYSRVDAQAYQG
LNQGVIRDNELPWVLPRYTYSYFGQPDAWGGRLAVDTTDFYVYRASGVSDQRGQLSLNWDRPFRNHLGQLWKLTLHLESA
IHRATSLNQQPIYAPTTTRQQITGQVLPTVALKMNWPFLRGFMNGKGTQILEPIAQVIAAPNTGNSRNSNLPNEDSLSYE
FTDSTLFAINRYPGTDRLDGGLRGNFGVHGNWTWNGHEIDTLVGESLQEHIDHNRIPYSGLNHHFSDVVARARFAPNQYI
DFTGRTRIDPYAGRIDFGDALVSTGVKHFHLTSGYVYEPVTPYYYYATNIQTASPNAAYYVRTNEVTVGANTNWQNYSLS
AFVRRSLSRQQFVSMGGNAGYNNDCFGFNLMYIKQYTSIGGQQRNSTIMFTLTFKTIGAFGIRG

Specific function: Involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis [H]

COG id: COG1452

COG function: function code M; Organic solvent tolerance protein OstA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020889
- InterPro:   IPR007543 [H]

Pfam domain/function: PF04453 OstA_C [H]

EC number: NA

Molecular weight: Translated: 87547; Mature: 87547

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPILMSRRLFRPARGQRSQARGTLLAAGLLGSTFLGAVIQVHRAHAQVQAKPIKITTGS
CCCHHHHHHHCCCCCCCCHHHCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC
PMSQSAPVTFQADTVTYDNARGIVTWTGNVQIWQEDHVLRADTVTYDRNTGIAAAHGHVA
CCCCCCCEEEEECEEEECCCCEEEEEECCEEEEECCCEEEEEEEEEECCCCEEEECCCEE
MVEPDGTVIFSDYAELSNGMRDGIMTRLHMLMTENAKLAANGMRRTGAKVNDMARAVYTA
EECCCCCEEEECHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHCCCCHHHHHHHHHHH
CNICAQHPERPPFWQLRAYDAIDDTEHKRIDFRDAYLDMFGIPVMYMPAFSMSDPSVKRQ
HHHHHCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHCCCEEEECCCCCCCCCCHHH
SGFLTPGITPHDRYLGAYVTIPYYWVIDKQSDMTIQGLLSTRTGPQVSTQYRNALNFGTL
CCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCHH
NILAGLAYDTNRQGSYVNTFGNTTGTSDEHGIQGYIFAQAQASITRAWRAGANINLATSA
HHHEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCEEEEECH
DYMRDYRVSGYGQEMLTSNVYLEGFGTGSYSRVDAQAYQGLNQGVIRDNELPWVLPRYTY
HHHHHCCCCCCCHHHHCCCEEEEEECCCCCCEECHHHHCCCCCCCEECCCCCEEECCCCH
SYFGQPDAWGGRLAVDTTDFYVYRASGVSDQRGQLSLNWDRPFRNHLGQLWKLTLHLESA
HHCCCCCCCCCEEEEEECEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
IHRATSLNQQPIYAPTTTRQQITGQVLPTVALKMNWPFLRGFMNGKGTQILEPIAQVIAA
HHHHHCCCCCCEECCCCCHHHHCCCCCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHCC
PNTGNSRNSNLPNEDSLSYEFTDSTLFAINRYPGTDRLDGGLRGNFGVHGNWTWNGHEID
CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCHH
TLVGESLQEHIDHNRIPYSGLNHHFSDVVARARFAPNQYIDFTGRTRIDPYAGRIDFGDA
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHH
LVSTGVKHFHLTSGYVYEPVTPYYYYATNIQTASPNAAYYVRTNEVTVGANTNWQNYSLS
HHHCCCEEEEEECCEEECCCCCEEEEEEEEEECCCCEEEEEEECEEEECCCCCCCCCCHH
AFVRRSLSRQQFVSMGGNAGYNNDCFGFNLMYIKQYTSIGGQQRNSTIMFTLTFKTIGAF
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCEEEEEEEEHHHCCC
GIRG
CCCC
>Mature Secondary Structure
MMPILMSRRLFRPARGQRSQARGTLLAAGLLGSTFLGAVIQVHRAHAQVQAKPIKITTGS
CCCHHHHHHHCCCCCCCCHHHCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC
PMSQSAPVTFQADTVTYDNARGIVTWTGNVQIWQEDHVLRADTVTYDRNTGIAAAHGHVA
CCCCCCCEEEEECEEEECCCCEEEEEECCEEEEECCCEEEEEEEEEECCCCEEEECCCEE
MVEPDGTVIFSDYAELSNGMRDGIMTRLHMLMTENAKLAANGMRRTGAKVNDMARAVYTA
EECCCCCEEEECHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHCCCCHHHHHHHHHHH
CNICAQHPERPPFWQLRAYDAIDDTEHKRIDFRDAYLDMFGIPVMYMPAFSMSDPSVKRQ
HHHHHCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHCCCEEEECCCCCCCCCCHHH
SGFLTPGITPHDRYLGAYVTIPYYWVIDKQSDMTIQGLLSTRTGPQVSTQYRNALNFGTL
CCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCHH
NILAGLAYDTNRQGSYVNTFGNTTGTSDEHGIQGYIFAQAQASITRAWRAGANINLATSA
HHHEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCEEEEECH
DYMRDYRVSGYGQEMLTSNVYLEGFGTGSYSRVDAQAYQGLNQGVIRDNELPWVLPRYTY
HHHHHCCCCCCCHHHHCCCEEEEEECCCCCCEECHHHHCCCCCCCEECCCCCEEECCCCH
SYFGQPDAWGGRLAVDTTDFYVYRASGVSDQRGQLSLNWDRPFRNHLGQLWKLTLHLESA
HHCCCCCCCCCEEEEEECEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
IHRATSLNQQPIYAPTTTRQQITGQVLPTVALKMNWPFLRGFMNGKGTQILEPIAQVIAA
HHHHHCCCCCCEECCCCCHHHHCCCCCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHCC
PNTGNSRNSNLPNEDSLSYEFTDSTLFAINRYPGTDRLDGGLRGNFGVHGNWTWNGHEID
CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCHH
TLVGESLQEHIDHNRIPYSGLNHHFSDVVARARFAPNQYIDFTGRTRIDPYAGRIDFGDA
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHH
LVSTGVKHFHLTSGYVYEPVTPYYYYATNIQTASPNAAYYVRTNEVTVGANTNWQNYSLS
HHHCCCEEEEEECCEEECCCCCEEEEEEEEEECCCCEEEEEEECEEEECCCCCCCCCCHH
AFVRRSLSRQQFVSMGGNAGYNNDCFGFNLMYIKQYTSIGGQQRNSTIMFTLTFKTIGAF
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCEEEEEEEEHHHCCC
GIRG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA