Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is guaD [H]
Identifier: 162148937
GI number: 162148937
Start: 3254984
End: 3256333
Strand: Direct
Name: guaD [H]
Synonym: GDI_3167
Alternate gene names: 162148937
Gene position: 3254984-3256333 (Clockwise)
Preceding gene: 162148936
Following gene: 162148939
Centisome position: 82.53
GC content: 70.74
Gene sequence:
>1350_bases ATGACATCGCCCCCGTCCGCCCCACCCCGCCGCCGCGCCCTGCGCGGACCGGCCGTCACCTTCCGTGCCGACCCGTTCCT GGACGATCCGTCCCGGGCCCTGGTCCATGAGCCCGACGCGCTGATCCTGGTCGAGGACGGGCACATCACCCGTTTCGGCG CCTTCGACGCGCTGCGCGATGCCATTCCCGAAGGCACGCCGGTCACGTCCTATCCCGACTGCCTCCTGTCGGCCGGGTTC GTGGACACGCATGTCCATTACCCGCAACTGCCGATGATCGCGGCCTATGGCGAGCAGTTGCTGGAATGGCTGGAACGCTA CACCTTCCCGACCGAGGCCCGCTTCGCCGATCCCGTCCATGCCGGCCAGGTCGCCCGGCGCTTCCTGCGCGAACTGCTGC GGGCCGGCACCACCAGCGCCGCCGTGTACTGCACCGTCCATCCGCAGTCGGTCGAGGCGTTCTTCGCCGAATCGGCCCGG CTGAACACCCGCATGGTGGCGGGCAAGGTCCTGATGGACCGCAACGCCCCCGACGGCCTGCGCGACACCCCCCAGGGCGG ATATGACGAATCGCTGGCCCTGATCGACCGCTGGCACGGGCGCGGACGCCAGTTGTACGCCGTGACCCCGCGCTTCGCCG CCACCAGCACCGAGGAACAGCTCGACCTGGCCGGCAGCCTGCTGCGCCAGCGCGACGGGCTGTTCATGCAGACCCACCTG TCGGAAAACCAGGCGGAGGTCGACTGGATCCGCCAGCTCTTCCCCCGGCGCCGGTCCTATCTGGATGTCTATGCCCATGC GGGGCTGGTCGGGCCGCGCAGCGTGCTGGGCCACGGCATCCATGTGGACGAGGAGAATTTCTGCACCTGCCACGCCGCCG GCTGCGCGCTGGCGCACTGCCCGACATCGAACCTGTTCCTGGGCAGCGGCGCGTTCCGCCTGTTCGACGCGGTGGACCCG CGCCGTCCGGTCCGCGTCGGGCTGGGCACCGATATCGGTGCCGGAACCAGCCTGTCGCAGCTCCAGACGCTGAACGAGGC TTACAAGGTCGCGCAATCGACCGGCCGGCGGCTGCACCCGGCGCAGGCCTTCTGGCTGGCCACCGCCGGCGGCGCGCGAT CGCTGTACCTGGACGACCGGATCGGCACGATCGCCCCGGGCATGGAGGCCGACCTGTGCGTCCTGGACCCCCGCGCCACC CCGCTGATGGCCCAGCGCGCCGAACGGTGCGAGACGATCGAGGACCTGCTGTTCGTCCTGATGATGCTGGGCGACGACCG CAGCGTCCGCGCAACCTACGTGGCCGGCGAACTGCTGCACGACCGCGACGCGGCCCCGCAGGCGGCATAG
Upstream 100 bases:
>100_bases GCGTCGAAACCCTATCGAATCGCCCAGTCCTGACCGGCTTCCAATGGCCGGACGAAACAGGCAAGACTGACCGGCAATTC CCGAGTGCCGAGCCCCGATC
Downstream 100 bases:
>100_bases GCCGGACCTGCGCCCCGCGCCGTCAGGGACCGGTCGTGGCGTGATGGTCCGCCGGGTCCGCCTGTCCATGCGACGGCGGA CCGGAAGCAGCTGAAAAAAG
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MTSPPSAPPRRRALRGPAVTFRADPFLDDPSRALVHEPDALILVEDGHITRFGAFDALRDAIPEGTPVTSYPDCLLSAGF VDTHVHYPQLPMIAAYGEQLLEWLERYTFPTEARFADPVHAGQVARRFLRELLRAGTTSAAVYCTVHPQSVEAFFAESAR LNTRMVAGKVLMDRNAPDGLRDTPQGGYDESLALIDRWHGRGRQLYAVTPRFAATSTEEQLDLAGSLLRQRDGLFMQTHL SENQAEVDWIRQLFPRRRSYLDVYAHAGLVGPRSVLGHGIHVDEENFCTCHAAGCALAHCPTSNLFLGSGAFRLFDAVDP RRPVRVGLGTDIGAGTSLSQLQTLNEAYKVAQSTGRRLHPAQAFWLATAGGARSLYLDDRIGTIAPGMEADLCVLDPRAT PLMAQRAERCETIEDLLFVLMMLGDDRSVRATYVAGELLHDRDAAPQAA
Sequences:
>Translated_449_residues MTSPPSAPPRRRALRGPAVTFRADPFLDDPSRALVHEPDALILVEDGHITRFGAFDALRDAIPEGTPVTSYPDCLLSAGF VDTHVHYPQLPMIAAYGEQLLEWLERYTFPTEARFADPVHAGQVARRFLRELLRAGTTSAAVYCTVHPQSVEAFFAESAR LNTRMVAGKVLMDRNAPDGLRDTPQGGYDESLALIDRWHGRGRQLYAVTPRFAATSTEEQLDLAGSLLRQRDGLFMQTHL SENQAEVDWIRQLFPRRRSYLDVYAHAGLVGPRSVLGHGIHVDEENFCTCHAAGCALAHCPTSNLFLGSGAFRLFDAVDP RRPVRVGLGTDIGAGTSLSQLQTLNEAYKVAQSTGRRLHPAQAFWLATAGGARSLYLDDRIGTIAPGMEADLCVLDPRAT PLMAQRAERCETIEDLLFVLMMLGDDRSVRATYVAGELLHDRDAAPQAA >Mature_448_residues TSPPSAPPRRRALRGPAVTFRADPFLDDPSRALVHEPDALILVEDGHITRFGAFDALRDAIPEGTPVTSYPDCLLSAGFV DTHVHYPQLPMIAAYGEQLLEWLERYTFPTEARFADPVHAGQVARRFLRELLRAGTTSAAVYCTVHPQSVEAFFAESARL NTRMVAGKVLMDRNAPDGLRDTPQGGYDESLALIDRWHGRGRQLYAVTPRFAATSTEEQLDLAGSLLRQRDGLFMQTHLS ENQAEVDWIRQLFPRRRSYLDVYAHAGLVGPRSVLGHGIHVDEENFCTCHAAGCALAHCPTSNLFLGSGAFRLFDAVDPR RPVRVGLGTDIGAGTSLSQLQTLNEAYKVAQSTGRRLHPAQAFWLATAGGARSLYLDDRIGTIAPGMEADLCVLDPRATP LMAQRAERCETIEDLLFVLMMLGDDRSVRATYVAGELLHDRDAAPQAA
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=375, Percent_Identity=32.2666666666667, Blast_Score=197, Evalue=1e-50, Organism=Escherichia coli, GI1789249, Length=435, Percent_Identity=48.0459770114943, Blast_Score=420, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6319963, Length=400, Percent_Identity=32, Blast_Score=201, Evalue=2e-52, Organism=Drosophila melanogaster, GI24643849, Length=390, Percent_Identity=32.8205128205128, Blast_Score=194, Evalue=8e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 49341; Mature: 49210
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPPSAPPRRRALRGPAVTFRADPFLDDPSRALVHEPDALILVEDGHITRFGAFDALRD CCCCCCCCHHHHHCCCCEEEEECCCCCCCCCHHHEECCCEEEEEECCCEEEEHHHHHHHH AIPEGTPVTSYPDCLLSAGFVDTHVHYPQLPMIAAYGEQLLEWLERYTFPTEARFADPVH HCCCCCCCCCCCHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH AGQVARRFLRELLRAGTTSAAVYCTVHPQSVEAFFAESARLNTRMVAGKVLMDRNAPDGL HHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCC RDTPQGGYDESLALIDRWHGRGRQLYAVTPRFAATSTEEQLDLAGSLLRQRDGLFMQTHL CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC SENQAEVDWIRQLFPRRRSYLDVYAHAGLVGPRSVLGHGIHVDEENFCTCHAAGCALAHC CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCEEEECCCEEEEEC PTSNLFLGSGAFRLFDAVDPRRPVRVGLGTDIGAGTSLSQLQTLNEAYKVAQSTGRRLHP CCCCEEECCCHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC AQAFWLATAGGARSLYLDDRIGTIAPGMEADLCVLDPRATPLMAQRAERCETIEDLLFVL CCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH MMLGDDRSVRATYVAGELLHDRDAAPQAA HHHCCCCCEEEEEHHHHHHHCCCCCCCCC >Mature Secondary Structure TSPPSAPPRRRALRGPAVTFRADPFLDDPSRALVHEPDALILVEDGHITRFGAFDALRD CCCCCCCHHHHHCCCCEEEEECCCCCCCCCHHHEECCCEEEEEECCCEEEEHHHHHHHH AIPEGTPVTSYPDCLLSAGFVDTHVHYPQLPMIAAYGEQLLEWLERYTFPTEARFADPVH HCCCCCCCCCCCHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH AGQVARRFLRELLRAGTTSAAVYCTVHPQSVEAFFAESARLNTRMVAGKVLMDRNAPDGL HHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCC RDTPQGGYDESLALIDRWHGRGRQLYAVTPRFAATSTEEQLDLAGSLLRQRDGLFMQTHL CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC SENQAEVDWIRQLFPRRRSYLDVYAHAGLVGPRSVLGHGIHVDEENFCTCHAAGCALAHC CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCEEEECCCEEEEEC PTSNLFLGSGAFRLFDAVDPRRPVRVGLGTDIGAGTSLSQLQTLNEAYKVAQSTGRRLHP CCCCEEECCCHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC AQAFWLATAGGARSLYLDDRIGTIAPGMEADLCVLDPRATPLMAQRAERCETIEDLLFVL CCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH MMLGDDRSVRATYVAGELLHDRDAAPQAA HHHCCCCCEEEEEHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]