Click here to switch to the map view.

The map label for this gene is 162146810

Identifier: 162146810

GI number: 162146810

Start: 1007990

End: 1008433

Strand: Reverse

Name: 162146810

Synonym: GDI_0992

Alternate gene names: NA

Gene position: 1008433-1007990 (Counterclockwise)

Preceding gene: 162146812

Following gene: 162146805

Centisome position: 25.57

GC content: 58.33

Gene sequence:

>444_bases
ATGGTGAAGCGGGTGAGCCTCAGCGATGCGGAATGCCCGGTGGCCCGGTCGCTGGATGGCATTGGCGACTGGTGGTCGCT
GCTTATCGTGCGCGACGCCTTTGACGGCGCAAGGCGTTTCGGAGAATTTCAGAAAAGTCTCCGAATATCCAAAGGGATTC
TGGCGAGCCGTTTGCAGGGTCTTGTTGCCTTGGGAGTGCTTGCAGTGACGTCGGCATCTGACGGCAGTGCCTGGCAGGAC
TACGTGCTGACCCCAAAAGGAGAGGCGCTGTTTCCGGTTATTGTCGCATTGAGGCAGTGGGGAGAGGCGTTCTGCTACAG
ACCCGGGGAGCCACATTCGGAACTGGTAGACCGGAAAGATGGAAAAACCCTGGCGCCGTTGATCGTGCGGAATGCGGACG
GCGAGATTATTCGGGCGCGGGATACCATCGTCATGAAAATCTGA

Upstream 100 bases:

>100_bases
GACATCGGTTGCACCTCATAATAGGTTCTATAATAGAACCTATTGCACCATGCGTCGTCCAGTTCTATTTTAGAACCATA
TGAAAATGTGAGGATGTCGG

Downstream 100 bases:

>100_bases
TGAGGCGGTGAAGGAGACTGGCGCTGTGACGGACGGCGAGTGCAGTAAAGACGGTGGCGTGTCCCGTCGGTCCAGACCCG
GATATGGCATCCGACAAATC

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MVKRVSLSDAECPVARSLDGIGDWWSLLIVRDAFDGARRFGEFQKSLRISKGILASRLQGLVALGVLAVTSASDGSAWQD
YVLTPKGEALFPVIVALRQWGEAFCYRPGEPHSELVDRKDGKTLAPLIVRNADGEIIRARDTIVMKI

Sequences:

>Translated_147_residues
MVKRVSLSDAECPVARSLDGIGDWWSLLIVRDAFDGARRFGEFQKSLRISKGILASRLQGLVALGVLAVTSASDGSAWQD
YVLTPKGEALFPVIVALRQWGEAFCYRPGEPHSELVDRKDGKTLAPLIVRNADGEIIRARDTIVMKI
>Mature_147_residues
MVKRVSLSDAECPVARSLDGIGDWWSLLIVRDAFDGARRFGEFQKSLRISKGILASRLQGLVALGVLAVTSASDGSAWQD
YVLTPKGEALFPVIVALRQWGEAFCYRPGEPHSELVDRKDGKTLAPLIVRNADGEIIRARDTIVMKI

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16139; Mature: 16139

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRVSLSDAECPVARSLDGIGDWWSLLIVRDAFDGARRFGEFQKSLRISKGILASRLQG
CCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVALGVLAVTSASDGSAWQDYVLTPKGEALFPVIVALRQWGEAFCYRPGEPHSELVDRKD
HHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
GKTLAPLIVRNADGEIIRARDTIVMKI
CCEECCEEEECCCCCEEEECCEEEEEC
>Mature Secondary Structure
MVKRVSLSDAECPVARSLDGIGDWWSLLIVRDAFDGARRFGEFQKSLRISKGILASRLQG
CCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVALGVLAVTSASDGSAWQDYVLTPKGEALFPVIVALRQWGEAFCYRPGEPHSELVDRKD
HHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
GKTLAPLIVRNADGEIIRARDTIVMKI
CCEECCEEEECCCCCEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]