Click here to switch to the map view.

The map label for this gene is glgC

Identifier: 162138524

GI number: 162138524

Start: 486114

End: 487376

Strand: Reverse

Name: glgC

Synonym: RPB_0442

Alternate gene names: 162138524

Gene position: 487376-486114 (Counterclockwise)

Preceding gene: 86747569

Following gene: 86747567

Centisome position: 9.14

GC content: 64.37

Gene sequence:

>1263_bases
ATGAGTAACGGTGTTACCGCTCCGCTCGCCCGCCACGCCATGGCCTATGTGCTGGCAGGGGGCCGCGGCAGCCGGTTGAT
GGAGCTGACCGATCGCCGCGCCAAGCCGGCGGTGTATTTCGGCGGCAAATCGCGCATCATCGATTTCGCGCTGTCCAATG
CGCTGAATTCCGGCATCCGCCGCATTGCGGTGGCGACGCAATACAAGGCGCACAGCCTGATCCGGCATCTGCAGCGCGGC
TGGAACTTCTTCCGGCCGGAGCGCAACGAAAGCTTCGACATCCTGCCAGCGAGCCAGCGCGTCTCCGACGACATGTGGTA
TCGGGGAACGGCCGATGCGGTGTATCAGAACATCGACATCATCGAGAGCTACGATCCGAAGTTCATCGTGCTCCTGGCCG
GCGACCACGTCTACAAGATGGACTACGAGAAGATGCTGCAGCAGCACGTCGAGCAGGGCGCCGACGTCACCGTCGGCTGT
CTCGAAGTGGCGCGCAGCGAGGCGACCGCCTTCGGCGTGATGCATGTCGACGCCAAGGACGTGATCCAGAGCTTCCTGGA
GAAGCCCGCCGACCCGCCGGCGATGCCGGGCAAGCCCGACAGGGCGCTGGTCAGCATGGGCATCTACGTGTTCGACACCA
AATTCCTGATCGAGGAATTGCATCGCGACGCCGCCAATCCGAACTCGTCGCACGATTTCGGCAAGGACATCATCCCCTAC
ATCGTCCAGCACGGCAAAGCGGTCGCGCATCATTTCGACAAATCCTGCCGCCGCTCGCATGCCGAGGACACCAGCTACTG
GCGTGACGCCGGCACCGTCGATGCGTATTGGGCCGCCAATATCGACCTCACCGACATCGTGCCGCAGCTCGATCTGTACG
ACCGCGAATGGCCGATCTGGACCTATGGGGAGATCACCCCGCCGGCGAAATTCGTCCACGACAAGGACGGCCGCCGCGGC
GAGGCGGTGTCGTCGCTGGTGTCGGGCGGCTGCATCATCTCCGGCGCGGCGTTGCGGCATACGCTGCTGTTCACCGGCGT
GCGGGTGCACTCCTATTCGCAGGTCGAGGGCGCGGTGATCCTGCCCTATGCGGACATCGCCCGCTCGTGCCGGCTCAAGA
ACGTGGTGGTCGATGCCGAAGTGCGGATCCCGGACGGGCTGGTGGTCGGCGAGGACCCCGAGCTCGACGCCAGGCGATTC
AGGCGCACCGACAGCGGCATCTGCCTGATCACCCAGCCGATGATCGACAGGCTCGACCAATGA

Upstream 100 bases:

>100_bases
ACTGCGGCGATGCAATATGGTACGCCGGTGCGGGCGGATCGAATGCGACGAATTGCGTGAACCGGAACGTCCGCCGGCGA
CGGCAGTAATGAGAGGCTTC

Downstream 100 bases:

>100_bases
GCGCGCTGACGGCGCTGTCGATCGCATCGGAAATCTTCCCGCTGATCAAGACCGGCGGCCTCGCCGACGTCACCGGCGCG
CTGCCGACCGCGCTGAAGCC

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSNGVTAPLARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQRG
WNFFRPERNESFDILPASQRVSDDMWYRGTADAVYQNIDIIESYDPKFIVLLAGDHVYKMDYEKMLQQHVEQGADVTVGC
LEVARSEATAFGVMHVDAKDVIQSFLEKPADPPAMPGKPDRALVSMGIYVFDTKFLIEELHRDAANPNSSHDFGKDIIPY
IVQHGKAVAHHFDKSCRRSHAEDTSYWRDAGTVDAYWAANIDLTDIVPQLDLYDREWPIWTYGEITPPAKFVHDKDGRRG
EAVSSLVSGGCIISGAALRHTLLFTGVRVHSYSQVEGAVILPYADIARSCRLKNVVVDAEVRIPDGLVVGEDPELDARRF
RRTDSGICLITQPMIDRLDQ

Sequences:

>Translated_420_residues
MSNGVTAPLARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQRG
WNFFRPERNESFDILPASQRVSDDMWYRGTADAVYQNIDIIESYDPKFIVLLAGDHVYKMDYEKMLQQHVEQGADVTVGC
LEVARSEATAFGVMHVDAKDVIQSFLEKPADPPAMPGKPDRALVSMGIYVFDTKFLIEELHRDAANPNSSHDFGKDIIPY
IVQHGKAVAHHFDKSCRRSHAEDTSYWRDAGTVDAYWAANIDLTDIVPQLDLYDREWPIWTYGEITPPAKFVHDKDGRRG
EAVSSLVSGGCIISGAALRHTLLFTGVRVHSYSQVEGAVILPYADIARSCRLKNVVVDAEVRIPDGLVVGEDPELDARRF
RRTDSGICLITQPMIDRLDQ
>Mature_419_residues
SNGVTAPLARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQRGW
NFFRPERNESFDILPASQRVSDDMWYRGTADAVYQNIDIIESYDPKFIVLLAGDHVYKMDYEKMLQQHVEQGADVTVGCL
EVARSEATAFGVMHVDAKDVIQSFLEKPADPPAMPGKPDRALVSMGIYVFDTKFLIEELHRDAANPNSSHDFGKDIIPYI
VQHGKAVAHHFDKSCRRSHAEDTSYWRDAGTVDAYWAANIDLTDIVPQLDLYDREWPIWTYGEITPPAKFVHDKDGRRGE
AVSSLVSGGCIISGAALRHTLLFTGVRVHSYSQVEGAVILPYADIARSCRLKNVVVDAEVRIPDGLVVGEDPELDARRFR
RTDSGICLITQPMIDRLDQ

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family

Homologues:

Organism=Escherichia coli, GI1789837, Length=410, Percent_Identity=56.0975609756098, Blast_Score=501, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGC_RHOP2 (Q2J307)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_484064.2
- ProteinModelPortal:   Q2J307
- SMR:   Q2J307
- STRING:   Q2J307
- GeneID:   3909998
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_0442
- eggNOG:   COG0448
- HOGENOM:   HBG703946
- ProtClustDB:   PRK00725
- BioCyc:   RPAL316058:RPB_0442-MONOMER
- HAMAP:   MF_00624
- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004
- TIGRFAMs:   TIGR02091

Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like

EC number: =2.7.7.27

Molecular weight: Translated: 46960; Mature: 46829

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1; PS00809 ADP_GLC_PYROPHOSPH_2; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGVTAPLARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIR
CCCCCCCHHHHHHHHHEEECCCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHH
RIAVATQYKAHSLIRHLQRGWNFFRPERNESFDILPASQRVSDDMWYRGTADAVYQNIDI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCHHHHHHCCHH
IESYDPKFIVLLAGDHVYKMDYEKMLQQHVEQGADVTVGCLEVARSEATAFGVMHVDAKD
EECCCCCEEEEEECCEEEECCHHHHHHHHHHCCCCEEHHHHHHHHHHHHEEEEEEECHHH
VIQSFLEKPADPPAMPGKPDRALVSMGIYVFDTKFLIEELHRDAANPNSSHDFGKDIIPY
HHHHHHHCCCCCCCCCCCCCHHHHHHCHHEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
IVQHGKAVAHHFDKSCRRSHAEDTSYWRDAGTVDAYWAANIDLTDIVPQLDLYDREWPIW
HHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCEE
TYGEITPPAKFVHDKDGRRGEAVSSLVSGGCIISGAALRHTLLFTGVRVHSYSQVEGAVI
ECCCCCCCHHHCCCCCCCCHHHHHHHHCCCCEEECHHHHHHHHHHCEEEECCCCCCCEEE
LPYADIARSCRLKNVVVDAEVRIPDGLVVGEDPELDARRFRRTDSGICLITQPMIDRLDQ
ECHHHHHHHCCCCEEEEEEEEECCCCEEECCCCCHHHHHHHCCCCCEEEEECHHHHHCCC
>Mature Secondary Structure 
SNGVTAPLARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIR
CCCCCCHHHHHHHHHEEECCCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHH
RIAVATQYKAHSLIRHLQRGWNFFRPERNESFDILPASQRVSDDMWYRGTADAVYQNIDI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCHHHHHHCCHH
IESYDPKFIVLLAGDHVYKMDYEKMLQQHVEQGADVTVGCLEVARSEATAFGVMHVDAKD
EECCCCCEEEEEECCEEEECCHHHHHHHHHHCCCCEEHHHHHHHHHHHHEEEEEEECHHH
VIQSFLEKPADPPAMPGKPDRALVSMGIYVFDTKFLIEELHRDAANPNSSHDFGKDIIPY
HHHHHHHCCCCCCCCCCCCCHHHHHHCHHEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
IVQHGKAVAHHFDKSCRRSHAEDTSYWRDAGTVDAYWAANIDLTDIVPQLDLYDREWPIW
HHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCEE
TYGEITPPAKFVHDKDGRRGEAVSSLVSGGCIISGAALRHTLLFTGVRVHSYSQVEGAVI
ECCCCCCCHHHCCCCCCCCHHHHHHHHCCCCEEECHHHHHHHHHHCEEEECCCCCCCEEE
LPYADIARSCRLKNVVVDAEVRIPDGLVVGEDPELDARRFRRTDSGICLITQPMIDRLDQ
ECHHHHHHHCCCCEEEEEEEEECCCCEEECCCCCHHHHHHHCCCCCEEEEECHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA