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The map label for this gene is ynhG [H]

Identifier: 161870603

GI number: 161870603

Start: 1699937

End: 1701013

Strand: Direct

Name: ynhG [H]

Synonym: NMCC_1671

Alternate gene names: 161870603

Gene position: 1699937-1701013 (Clockwise)

Preceding gene: 161870594

Following gene: 161870611

Centisome position: 78.94

GC content: 53.11

Gene sequence:

>1077_bases
ATGATTTGCCGAAAACCTATCGGACACACACCATATTTTGATATGAATAAAACAATCTGCCGCACTGCTGCACTATTGAT
AAGCGGTTTTTCATACGCAAACACCGTCATTCCCGATGTCTCCCCCGTCGCACAAGGTCAACATGTCTTCATTAACATCC
CTCAGCAACGCCTGTTCCTCTACACCGACGGCAAACTGACCAAGGTTTATCCCGTTGCAGTAGGTCGGGCGATGACGCAA
ACCAATCTAGGCGAACATAAAATCGGTGCGAAAGCCTATAACCCTGTTTGGTACATCCCCAAATCCATACAGAAAGAACG
CGGCGACGGCGTAAAAACCATAGCCGCCGGCCCGGACAACCCTTTGGGGCCGGTTTTTGTCCGCTTAGGCGACCCCAAAC
TCGGTTTGGGCATACACGGGACCAATGCGCCGGCCAGCGTCCCCGGGGTTCGAAGTCACGGCTGCGTCCGCATGAAATCG
CCCGACGCGCTCGAGTTTGCCAAAACCATCGCCAGCGGCTCGCCCGCCTCCGTCATCTATCAAATGGCGGGTCTCAATGA
AGATGCGGATCGCAACCTGTGGCTTGCCGCCTTCCGCGACCCTTACGGTAAGAACAACCTTGACATCGCCTCTCTGAAAA
AAAGTATTGCGCAATGGGCAAAAACACAGGGTAAAACCATCGCGCCCGAGAAAGTCGATGCTGTACTCAAAGACCGCACC
GGATCGGCCGTCTGCCTGACCTGCGGCAAAAACGGCAAGATGAAGATGCCGCTCAAATCGCTGGCGTGGATACAGGGTTC
TTCCTCATACAGCCAAGCTGAAGTCATTGAACAAACTGAGGAAACCAACTCTGCCGAAATATCCGAGACACGCACGCCCG
AAGTGCCTGATGTACACACGCCCGAGGCACAACCGCATTTAAATACCCAATCCGACGGCACGCCGACTGCCTATACCGAA
CCGGCTGCCGATTCATCGCCGCAAGTAGAAACACCTGATCAGGCTGCTTCCGAGCCGGTTGATGTATTATTTTCAATAGA
TGTGATACGGCAGGGAAATTTGCGTTTAGGTAATTGA

Upstream 100 bases:

>100_bases
AGGCGGAAATTTCCGCGACATTTGTTTCCGTTGCCATTACCCAATCCGTCCGCACTGTACCGAAGCGCATATTTTCGCAC
AAATTGGTACGGTTTCAGGT

Downstream 100 bases:

>100_bases
ATAACCTTCTGATTATTTAATGCTTATGTTTATCAGAAGTTGATAGGCGGTTTGGTTTTTGTTTGGCTTTTCCTACACCG
CCGCCTGCCGCTTTCTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVAQGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQ
TNLGEHKIGAKAYNPVWYIPKSIQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQWAKTQGKTIAPEKVDAVLKDRT
GSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVIEQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTE
PAADSSPQVETPDQAASEPVDVLFSIDVIRQGNLRLGN

Sequences:

>Translated_358_residues
MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVAQGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQ
TNLGEHKIGAKAYNPVWYIPKSIQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQWAKTQGKTIAPEKVDAVLKDRT
GSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVIEQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTE
PAADSSPQVETPDQAASEPVDVLFSIDVIRQGNLRLGN
>Mature_358_residues
MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVAQGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQ
TNLGEHKIGAKAYNPVWYIPKSIQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQWAKTQGKTIAPEKVDAVLKDRT
GSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVIEQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTE
PAADSSPQVETPDQAASEPVDVLFSIDVIRQGNLRLGN

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=216, Percent_Identity=29.1666666666667, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788299, Length=226, Percent_Identity=26.5486725663717, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 38550; Mature: 38550

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVAQGQHVFINIPQQRLFL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHCCCCEEEEECCCEEEEE
YTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKERGDGVKTIAAGPDN
EECCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHCCCCEEEEECCCCC
PLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKSPDALEFAKTIASGSPASVIY
CCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCHHHHH
QMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQWAKTQGKTIAPEKVDAVLKDRT
HHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
GSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVIEQTEETNSAEISETRTPEVPDVHT
CCEEEEEECCCCCEECCHHHHHEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQAASEPVDVLFSIDVIRQGNLRLGN
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHCCCEEEEEEEEEEECCCEEECC
>Mature Secondary Structure
MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVAQGQHVFINIPQQRLFL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHCCCCEEEEECCCEEEEE
YTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKERGDGVKTIAAGPDN
EECCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHCCCCEEEEECCCCC
PLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKSPDALEFAKTIASGSPASVIY
CCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCHHHHH
QMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQWAKTQGKTIAPEKVDAVLKDRT
HHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
GSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVIEQTEETNSAEISETRTPEVPDVHT
CCEEEEEECCCCCEECCHHHHHEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQAASEPVDVLFSIDVIRQGNLRLGN
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHCCCEEEEEEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]