Definition | Neisseria meningitidis 053442, complete genome. |
---|---|
Accession | NC_010120 |
Length | 2,153,416 |
Click here to switch to the map view.
The map label for this gene is 161870580
Identifier: 161870580
GI number: 161870580
Start: 1679477
End: 1679998
Strand: Reverse
Name: 161870580
Synonym: NMCC_1646
Alternate gene names: NA
Gene position: 1679998-1679477 (Counterclockwise)
Preceding gene: 161870581
Following gene: 161870579
Centisome position: 78.02
GC content: 29.31
Gene sequence:
>522_bases GTGAAAGATAGTTTAATGGACGCCTTTGATTTTTTTATGCAAGGCAATTTTAAAAAAATTGCAACTGAACAAGGTTTAGA CCGTAAATATTTTATATTCCAATATATCGTATGTAATTTATCTGCCATTTCTTCTTTTTGTCTAATGAAGATTATTCATA CTTATACTATTCTCTATATATTAATAGCTGTCATCGGTATTATTAATGGATTTATCTTGAGAAATAGGGTTCTATCTATA GTAAAAAATAAACAAAAGTTTTTATCTGATATGTTTCCCTTGGAAATGCCTTTCTTTTCTAGAGTATACAAAATACCTAT CTTGGCCAGATTCTTGAATAGGGGAATGAAATGGCTTTATCTCCAAAATTTTTTCTGTTTAGTTATGATTTGTTTCTCGA TATCTCTTATCCTTAATGAAGAAAGGGGGTGGATGCCTTATTTTGCCTGCTATTGGTTTGGACTTTGTTATCCAGTAAGC ACTTATTACGTTTTTTTATCCAGAGATTATAAACATATCTAA
Upstream 100 bases:
>100_bases TCTGTATCTAAATAATGTTCAGAATAGTATTATTTTTTAAATAAACCATGAATAGTACTTCACATTGTTTGTCGTATTAT TTAGCTTTTAAATTTCTAAT
Downstream 100 bases:
>100_bases ACTATTATGCGTGGCGGTACTTCCAAAGGTAAATTTTAACCTAATCAATTTACTCAAACCATCCAAAAATTACCAAGCAG CAATATAAACACAGATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKDSLMDAFDFFMQGNFKKIATEQGLDRKYFIFQYIVCNLSAISSFCLMKIIHTYTILYILIAVIGIINGFILRNRVLSI VKNKQKFLSDMFPLEMPFFSRVYKIPILARFLNRGMKWLYLQNFFCLVMICFSISLILNEERGWMPYFACYWFGLCYPVS TYYVFLSRDYKHI
Sequences:
>Translated_173_residues MKDSLMDAFDFFMQGNFKKIATEQGLDRKYFIFQYIVCNLSAISSFCLMKIIHTYTILYILIAVIGIINGFILRNRVLSI VKNKQKFLSDMFPLEMPFFSRVYKIPILARFLNRGMKWLYLQNFFCLVMICFSISLILNEERGWMPYFACYWFGLCYPVS TYYVFLSRDYKHI >Mature_173_residues MKDSLMDAFDFFMQGNFKKIATEQGLDRKYFIFQYIVCNLSAISSFCLMKIIHTYTILYILIAVIGIINGFILRNRVLSI VKNKQKFLSDMFPLEMPFFSRVYKIPILARFLNRGMKWLYLQNFFCLVMICFSISLILNEERGWMPYFACYWFGLCYPVS TYYVFLSRDYKHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20705; Mature: 20705
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDSLMDAFDFFMQGNFKKIATEQGLDRKYFIFQYIVCNLSAISSFCLMKIIHTYTILYI CCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAVIGIINGFILRNRVLSIVKNKQKFLSDMFPLEMPFFSRVYKIPILARFLNRGMKWLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHH LQNFFCLVMICFSISLILNEERGWMPYFACYWFGLCYPVSTYYVFLSRDYKHI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKDSLMDAFDFFMQGNFKKIATEQGLDRKYFIFQYIVCNLSAISSFCLMKIIHTYTILYI CCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAVIGIINGFILRNRVLSIVKNKQKFLSDMFPLEMPFFSRVYKIPILARFLNRGMKWLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHH LQNFFCLVMICFSISLILNEERGWMPYFACYWFGLCYPVSTYYVFLSRDYKHI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA