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The map label for this gene is tonB [H]

Identifier: 161870577

GI number: 161870577

Start: 1676354

End: 1677196

Strand: Reverse

Name: tonB [H]

Synonym: NMCC_1643

Alternate gene names: 161870577

Gene position: 1677196-1676354 (Counterclockwise)

Preceding gene: 161870579

Following gene: 161870576

Centisome position: 77.89

GC content: 56.11

Gene sequence:

>843_bases
ATGGATAAAGAACGAATTTTAACCCCCGCAGTCGTGTTTTCCGTCGCACTGCTGCATTTGGCAATGGTGGCATTGCTCTG
GCAGGCGCACAAGCTGCCCGTGATAGAGTCAGGCAATGTTATTGAATTTGTCGATTTGGGCGATTTTGGCGGAGGGGACG
GCGCACCCGAAGGTGCAGGCGCGCCTGCCGCGCCCGAACCGCAACCCGTGCCCGAGCCGCCCAAACCTGTCGAGCCGCCC
AAGCCGGTTTTGAAGCCGGTGGTTACGAAAAAGGCGGATGCGGATATTCAGCAGCCTAAGGAAGAGCCGAAACCTGAAGA
AAAGCCGAAACCCGAAGAAAAACCGAAACCAGAGCCTAAGCCGGAAGCGAAGCCTGTCCCGAAACCGGCGGAAAAACCGG
TCGAGAAGCCGTCTGAAAAACCTGCCGAACATCCCGGCAATGCTTCTGCCAAAGCAGACAGCGAGCAGGGCAATGGGGAA
GATAAGGGAACCGGTATCAAAGGAGACGGAACGGGGCGCGGAGAAGGCAGCGGTAAAGGTAGCGGCGGTGTCAAAGGCGA
ACACGGGGAAGGAGCCGGCAGCAGCAAAGGCAATCCTTTACGCGCCAACGGCAGCATTCCGCGCCCGGCTTATCCCACGC
TTTCTATGGAGAATGATGAGCAGGGTACGGTTGTTTTGAGCGTTTTGGTTTCTCCGGGCGGTCATGTTGAGTCCGTTAAA
ATCGTGAAAAGCAGTGGTTTTTCCCGGTTGGACAATGCGGCACGCAAGGCGGCGCAAAACGGGCATTTTCAAGCCAATGC
CTGGACGGAGTTTAAAGTCCCCGTCAAGTTTGAATTGAATTAG

Upstream 100 bases:

>100_bases
TTAAACACGGTTTGCCTGTGAACGGAACAGACATTCATATGACCAAAAATTGTAAAAATAGGTTGCAAATAGGAATTGTT
GCTATTATTATGCCCGAATT

Downstream 100 bases:

>100_bases
GCGGTTGCCGCAGCGGTTTGCGGCAGCTTGGATGTTTGATTGGTTTTTTCAGTGTTGGAATCATTATGAATTTGAAATTA
GTGTTTGAATCGGGCGATCC

Product: TonB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFVDLGDFGGGDGAPEGAGAPAAPEPQPVPEPPKPVEPP
KPVLKPVVTKKADADIQQPKEEPKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPGNASAKADSEQGNGE
DKGTGIKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMENDEQGTVVLSVLVSPGGHVESVK
IVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVKFELN

Sequences:

>Translated_280_residues
MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFVDLGDFGGGDGAPEGAGAPAAPEPQPVPEPPKPVEPP
KPVLKPVVTKKADADIQQPKEEPKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPGNASAKADSEQGNGE
DKGTGIKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMENDEQGTVVLSVLVSPGGHVESVK
IVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVKFELN
>Mature_280_residues
MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFVDLGDFGGGDGAPEGAGAPAAPEPQPVPEPPKPVEPP
KPVLKPVVTKKADADIQQPKEEPKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPGNASAKADSEQGNGE
DKGTGIKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMENDEQGTVVLSVLVSPGGHVESVK
IVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVKFELN

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 29211; Mature: 29211

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFVDLGDFGGGDGAPEGAG
CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCCCCCCC
APAAPEPQPVPEPPKPVEPPKPVLKPVVTKKADADIQQPKEEPKPEEKPKPEEKPKPEPK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
PEAKPVPKPAEKPVEKPSEKPAEHPGNASAKADSEQGNGEDKGTGIKGDGTGRGEGSGKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMENDEQGTVVLSVLVSPGGHVESVK
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEE
IVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVKFELN
EEHHCCCHHHHHHHHHHHHCCCEEECCEEEEECCEEEECC
>Mature Secondary Structure
MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFVDLGDFGGGDGAPEGAG
CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCCCCCCC
APAAPEPQPVPEPPKPVEPPKPVLKPVVTKKADADIQQPKEEPKPEEKPKPEEKPKPEPK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
PEAKPVPKPAEKPVEKPSEKPAEHPGNASAKADSEQGNGEDKGTGIKGDGTGRGEGSGKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMENDEQGTVVLSVLVSPGGHVESVK
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEE
IVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVKFELN
EEHHCCCHHHHHHHHHHHHCCCEEECCEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9006036 [H]