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The map label for this gene is exbB [H]

Identifier: 161870576

GI number: 161870576

Start: 1675626

End: 1676318

Strand: Reverse

Name: exbB [H]

Synonym: NMCC_1642

Alternate gene names: 161870576

Gene position: 1676318-1675626 (Counterclockwise)

Preceding gene: 161870577

Following gene: 161870575

Centisome position: 77.84

GC content: 54.26

Gene sequence:

>693_bases
TTGATTGGTTTTTTCAGTGTTGGAATCATTATGAATTTGAAATTAGTGTTTGAATCGGGCGATCCCGTCCTGATCGGTGT
GTTTGTGTTGATGCTGTTGATGAGTATCGTAACGTGGTGTTTGGTTGTCTTGCGCTGCATCAAGCTGTATCGGGCGCGCA
AAGGGAATGCCGCCGTCAAACGGCATATGCGCGATACTTTGTCGCTGAACGACGCGGTCGAAAAAGTGCGCGCCGTCGAT
GCGCCTTTGTCCAAACTGGCGCAAGAGGCATTGCAGTCTTACCGCAACTACCGCCGAAACGAAGCGTCCGAACTGGCGCA
GGCTTTGCCGTTGAACGAGTATTTGGTCATTCAAATCCGCAACAGTATGGCGCAGATTATGCGCCGGTTTGATTACGGGA
TGACCGCGCTTGCCTCCATCGGCGCGACCGCGCCGTTTATCGGGTTGTTCGGCACGGTTTGGGGGATTTACCACGCCCTG
ATCAATATCGGGCAAAGCGGGCAGATGAGTATTGCGGCGGTTGCCGGCCCGATTGGCGAGGCACTGGTGGCGACGGCGGC
GGGTTTGTTCGTGGCGATTCCGGCGGTGTTGGCATACAACTTCCTCAATCGCGGCACAAAAATACTGACCCAGGATTTGG
ATGCGATGGCGCACGATTTGCACGTCCGCCTGCTTAATCAAAAGGATAGCTGA

Upstream 100 bases:

>100_bases
ACGGGCATTTTCAAGCCAATGCCTGGACGGAGTTTAAAGTCCCCGTCAAGTTTGAATTGAATTAGGCGGTTGCCGCAGCG
GTTTGCGGCAGCTTGGATGT

Downstream 100 bases:

>100_bases
TTATGGCATTTGGTTCGATGAATTCCGGCGACGATTCTCCGATGTCCGACATCAACGTTACGCCGTTGGTGGACGTGATG
CTGGTGTTGCTGATTGTGTT

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MIGFFSVGIIMNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLNDAVEKVRAVD
APLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHAL
INIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKDS

Sequences:

>Translated_230_residues
MIGFFSVGIIMNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLNDAVEKVRAVD
APLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHAL
INIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKDS
>Mature_230_residues
MIGFFSVGIIMNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLNDAVEKVRAVD
APLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHAL
INIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKDS

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1789381, Length=223, Percent_Identity=30.9417040358744, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1786958, Length=109, Percent_Identity=43.1192660550459, Blast_Score=88, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 25210; Mature: 25210

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFFSVGIIMNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVK
CCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEH
NSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCHHHH
ALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIGFFSVGIIMNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVK
CCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEH
NSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCHHHH
ALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9140974 [H]