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The map label for this gene is yfhP [C]

Identifier: 161870250

GI number: 161870250

Start: 1294567

End: 1295061

Strand: Direct

Name: yfhP [C]

Synonym: NMCC_1291

Alternate gene names: 161870250

Gene position: 1294567-1295061 (Clockwise)

Preceding gene: 161870248

Following gene: 161870252

Centisome position: 60.12

GC content: 58.18

Gene sequence:

>495_bases
TTGGACAATTCCGCCCACTATAAAAAGCCGACACGGGCAACCACCACCATGAGACTGACCACCAAAGGGCGTTTCGCCGT
TACCGCTATGCTGGATTTGGCGATGAACGCGCAAACCGGCGCCGTCAAACTCAGTGCCATCAGCGAACGCCAAAACATAT
CCCTCTCCTATCTCGAGCAATTGTTCGGCAAACTCCGCCGCGCCGGACTGGTTGAAAGTCTGCGCGGACCCGGCGGCGGC
TACATCCTCGCCGCACCGGCGGCACGCATCAACATCGCCCAAATCATCGCCGCCGCCGAAGACCGGCTGGACGCGACCCA
ATGCGGCAGCAAAGCCAACTGCCACCACGGCGCGCCCTGCCTGACGCACGACCTTTGGGAGAATTTAAACAAAACCATCA
ACGACTACCTCGGCAGCGTTACCCTGCAAAGCATCATCGAACAGAAAAACAACGGCGACGGCAGCCGCGTCGTCCAATTT
ACACACATCCATTAA

Upstream 100 bases:

>100_bases
GATTTAAAAAACCAAACAAATAAAGCAAAATCAGACTATACCGCCATTTAAACAAACAATCGGCAACAGCTCCCCCATAC
TTGACTGAAACACTCAGATA

Downstream 100 bases:

>100_bases
ATAACACCCGAAAAAGAAAGAGCAAACCATGACCGTCAAAACCCCCGTTTACCTCGACTACGCCGCCACTACCCCCGTTG
ACAAACGCGTTGCCGAAAAA

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MDNSAHYKKPTRATTTMRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQLFGKLRRAGLVESLRGPGGG
YILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGAPCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQF
THIH

Sequences:

>Translated_164_residues
MDNSAHYKKPTRATTTMRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQLFGKLRRAGLVESLRGPGGG
YILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGAPCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQF
THIH
>Mature_164_residues
MDNSAHYKKPTRATTTMRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQLFGKLRRAGLVESLRGPGGG
YILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGAPCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQF
THIH

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=148, Percent_Identity=50, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17790; Mature: 17790

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSAHYKKPTRATTTMRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH
LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGAPC
HHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCH
LTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure
MDNSAHYKKPTRATTTMRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH
LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGAPC
HHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCH
LTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759842; 10710307 [H]