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The map label for this gene is gatC [H]

Identifier: 161870225

GI number: 161870225

Start: 1265319

End: 1265720

Strand: Direct

Name: gatC [H]

Synonym: NMCC_1266

Alternate gene names: 161870225

Gene position: 1265319-1265720 (Clockwise)

Preceding gene: 161870222

Following gene: 161870226

Centisome position: 58.76

GC content: 50.5

Gene sequence:

>402_bases
ATGCTGCAAATTGCCGCCGCAACGGATTTTTCCGTTATAATTAAAAATTCAAGCAATACGCCCCATCATACCCGAACGAC
GGTATCTTTACCATCAGACAAGGATGCTTTTCATGGCACTGACACTTGCCGACGTAGACAAAATCGCCCAACTCTCCCGA
CTGCACCTGACTGCGGAAGAAAAAGAAAATCGCTTCAAGAATTAAACGACATTTTCACTATGGTCGAACAGATGCAAACC
ATCAACACAGACGGCATCGAACCGATGGCGCATCCGCACGAGGCCGCCCTGCGCCTGCGCGAAGACGAAGTAACCGAAAC
CGACCGCGCCGCCGAATATCAGGCGGTCGCTCCGGAAGTACGCAACCGTCTGTACATCGTACCGCAAGTTATCGAAGAAT
AA

Upstream 100 bases:

>100_bases
AACGGATTAATCAGCACCAAAAAAGCCACAATCAGCTTGCCGATTTCCATACCCAATCCCATTATTTCCCCCTCCTTCAA
ACCCGTGCGGCAGGCATCCG

Downstream 100 bases:

>100_bases
TCCGAATATGCTTCAGACGGCATCAGCAATACCGCCCGAAGCCCTTTAAGGATGGAAGATTTATGACCCAATACACATTG
AAACAGGCAAGCGTCCTGTT

Product: Glu-tRNA(Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLQIAAATDFSVIIKNSSNTPHHTRTTVSLPSDKDAFHGTDTCRRRQNRPTLPTAPDCGRKRKSLQELNDIFTMVEQMQT
INTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAVAPEVRNRLYIVPQVIEE

Sequences:

>Translated_133_residues
MLQIAAATDFSVIIKNSSNTPHHTRTTVSLPSDKDAFHGTDTCRRRQNRPTLPTAPDCGRKRKSLQELNDIFTMVEQMQT
INTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAVAPEVRNRLYIVPQVIEE
>Mature_133_residues
MLQIAAATDFSVIIKNSSNTPHHTRTTVSLPSDKDAFHGTDTCRRRQNRPTLPTAPDCGRKRKSLQELNDIFTMVEQMQT
INTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAVAPEVRNRLYIVPQVIEE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 15067; Mature: 15067

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQIAAATDFSVIIKNSSNTPHHTRTTVSLPSDKDAFHGTDTCRRRQNRPTLPTAPDCGR
CEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCH
KRKSLQELNDIFTMVEQMQTINTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAVAPEV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHCHHH
RNRLYIVPQVIEE
HCCEEEEHHHHCC
>Mature Secondary Structure
MLQIAAATDFSVIIKNSSNTPHHTRTTVSLPSDKDAFHGTDTCRRRQNRPTLPTAPDCGR
CEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCH
KRKSLQELNDIFTMVEQMQTINTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAVAPEV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHCHHH
RNRLYIVPQVIEE
HCCEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA