Definition | Neisseria meningitidis 053442, complete genome. |
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Accession | NC_010120 |
Length | 2,153,416 |
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The map label for this gene is esd [C]
Identifier: 161870178
GI number: 161870178
Start: 1211118
End: 1211846
Strand: Direct
Name: esd [C]
Synonym: NMCC_1218
Alternate gene names: 161870178
Gene position: 1211118-1211846 (Clockwise)
Preceding gene: 161870177
Following gene: 161870179
Centisome position: 56.24
GC content: 46.5
Gene sequence:
>729_bases TTGCCAAATAATCCAGAAAATCGACCGCTTGGTGTGATTTATTGGCTTTCCGGCTTGACGTGTACGGAACAAAATTTCAT TACCAAATCAGGCTTTCAGCGTTATGCGGCAGAACATCAAGTAATTGTGGTGGCCTCCGATACCAGCCCTCGCGGAGAGC AAGTGCCGAACGATGATGCTTACGATTTAGGACAGGGTGCAGGCTTTTATTTGAATGCGACCGAACAGCCTTGGGCGGCG AATTATCAAATGTATGATTACATTTTGAACGAGCTGCCCCGTCTGATTGAGAAACACTTTCCTACCAACGGCAAACGTTC CATTATGGGGCATTCGATGGGCGGACACGGCGCATTGGTATTGGCACTACGGAATCGGGAACATTATCAAAGTGTTTCTG CCTTTTCGCCTATTTTATCGCCAAGCCTCGTACCGTGGGGAGAAAAAGCCTTTACTGCTTATTTAGGAAAAGATCGCGAA AAATGGCAGCAATATGATGCGAACTCACTCATTCAACAAGGCTATAAAGTGCAAGGTATGCGCATCGATCAAGGCTTGGA AGATGAGTTTTTGCCGACACAATTGCGTACCGAAGATTTTATCGAAACCTGCCGTGCGGCAAACCAGCCGGTCGATGTGC GTTTCCATAAAGGCTACGATCACAGCTATTACTTCATCGCCAGTTTTATTGGCGAGCATATTGCTTATCACGCCGCGTTT TTGAAGTAA
Upstream 100 bases:
>100_bases GATGAAACTGATTGAACAACATCAAATTTTTGGCGGTTCGCAACAAGTTTGGGCGCATCATGCCCAAACGCTGCAATGCG AAATGAAATTTGCCGTCTAT
Downstream 100 bases:
>100_bases ACCGAAGAGCGTTCAGTGTTCAAAGCAGTTTTGGGATAGCCGGCACGAGGGCGGTAAGAAGTGCCGGCAAAATACCAACA TAAACGTATGCCGTCTGAAC
Product: esterase D
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVASDTSPRGEQVPNDDAYDLGQGAGFYLNATEQPWAA NYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNREHYQSVSAFSPILSPSLVPWGEKAFTAYLGKDRE KWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAF LK
Sequences:
>Translated_242_residues MPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVASDTSPRGEQVPNDDAYDLGQGAGFYLNATEQPWAA NYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNREHYQSVSAFSPILSPSLVPWGEKAFTAYLGKDRE KWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAF LK >Mature_241_residues PNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVASDTSPRGEQVPNDDAYDLGQGAGFYLNATEQPWAAN YQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNREHYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREK WQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFL K
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=245, Percent_Identity=53.0612244897959, Blast_Score=271, Evalue=5e-73, Organism=Escherichia coli, GI1786551, Length=238, Percent_Identity=63.4453781512605, Blast_Score=323, Evalue=9e-90, Organism=Escherichia coli, GI1788477, Length=232, Percent_Identity=53.8793103448276, Blast_Score=268, Evalue=2e-73, Organism=Caenorhabditis elegans, GI17510185, Length=247, Percent_Identity=47.3684210526316, Blast_Score=226, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6322393, Length=250, Percent_Identity=43.6, Blast_Score=204, Evalue=9e-54, Organism=Drosophila melanogaster, GI45551932, Length=246, Percent_Identity=50.8130081300813, Blast_Score=245, Evalue=2e-65, Organism=Drosophila melanogaster, GI24648347, Length=246, Percent_Identity=50.8130081300813, Blast_Score=244, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 27548; Mature: 27417
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVASDTSPRGEQVPNDDA CCCCCCCCCEEEEEEECCCEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC YDLGQGAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALV HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEE LALRNREHYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGM EEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHCCCEECCE RIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAF ECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH LK CC >Mature Secondary Structure PNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVASDTSPRGEQVPNDDA CCCCCCCCEEEEEEECCCEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC YDLGQGAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALV HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEE LALRNREHYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGM EEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHCCCEECCE RIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAF ECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH LK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]