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The map label for this gene is perM [C]

Identifier: 161870063

GI number: 161870063

Start: 1084593

End: 1085663

Strand: Direct

Name: perM [C]

Synonym: NMCC_1099

Alternate gene names: 161870063

Gene position: 1084593-1085663 (Clockwise)

Preceding gene: 161870061

Following gene: 161870064

Centisome position: 50.37

GC content: 53.13

Gene sequence:

>1071_bases
ATGTATCGGAGGAAAGGGCGGGGCATCAAGCCGTGGATGGGTGCCGGTGCGGCGTTTGCCGCCTTGGTTTGGCTGGTTTT
CGCGCTCGGCGATACTTTGACTCCGTTTGCGGTTGCGGCGGTGCTGGCGTATGTATTGGACCCTTTGGTCGAATGGTTGC
AGAAAAAGGGTTTGAACCGTGCATCCGCTTCGATGTCTGTGATGGTGTTTTCCTTGATTTTGTTGTTGGCATTATTGTTG
ATTATCGTCCCTATGCTGGTCGGGCAGTTCAACAATTTGGCATCGCGCCTGCCCCAATTAATCGGTTTTATGCAGAACAC
GCTGCTGCCGTGGTTGAAAAATACAATCGGCGGATATATGGAAATCGATCAGGCATCTATTATTGCGTGGCTTCAGGCGC
ATACGGGCGAGTTGAGCAACGCGCTTAAGGCGTGGTTTCCCGTTTTGATGAGGCAGGGCGGCAATATTGTCAGCAGTATC
GGCAACCTACTGCTGCTGCCCTTGCTGCTTTATTATTTCCTGCTGGATTGGCAGCGGTGGTCGTGCGGCATCGCCAAACT
GGTTCCGAGGCGTTTTGCCGGTGCTTATACGCGCATTACGGGTAATTTGAACGAGGTATTGGGCGAATTTTTGCGCGGGC
AGCTTCTGGTGATGCTGATTATGGGTTTGGTTTACGGCTTGGGGTTGGTGCTGGTCGGGCTGGATTCGGGGTTTGCAATC
GGTATGGTTGCCGGTATTTTGGTTTTTGTTCCCTATTTGGGCGCGTTTACAGGACTGCTGCTGGCAACCGTCGCCGCCTT
GCTCCAGTTCGGTTCGTGGAACGGCATCCTATCGGTTTGGGCGGTTTTTGCCGTAGGACAGTTTCTCGAAAGTTTTTTCA
TTACGCCGAAAATCGTGGGAGACCGTATCGGGCTGTCGCCGTTTTGGGTTATCTTTTCCCTGATGGCGTTCGGACAGCTG
ATGGGTTTCGTCGGAATGTTGGCAGGATTGCCTTTGGCCGCCGTAACCTTGGTCTTGCTTCGCGAGGGCGTGCAGAAATA
TTTTGCCGGCAGTTTTTACCGGGGCAGGTAG

Upstream 100 bases:

>100_bases
AAACCGCGATAACAGGCTATCGGGAAGGCGGAGGCTTTTTTGACGGCGCGGCGGTTCTGCTATACTGGCGCGCAATATTA
TTTTTAGAAGGGTGGTTTTT

Downstream 100 bases:

>100_bases
GCGGTTCCGAAACATATAGTGGATTAACAAAAATCAGGACAAGGCGACGAAGCCGCAGACAGTACAAATAGGACAACGCC
GTACTGGTTTTTGTTAATCC

Product: transporter, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLL
IIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGGYMEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAI
GMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQL
MGFVGMLAGLPLAAVTLVLLREGVQKYFAGSFYRGR

Sequences:

>Translated_356_residues
MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLL
IIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGGYMEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAI
GMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQL
MGFVGMLAGLPLAAVTLVLLREGVQKYFAGSFYRGR
>Mature_356_residues
MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLL
IIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGGYMEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAI
GMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQL
MGFVGMLAGLPLAAVTLVLLREGVQKYFAGSFYRGR

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=312, Percent_Identity=26.9230769230769, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082271, Length=323, Percent_Identity=26.9349845201238, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38862; Mature: 38862

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKKGLNR
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
ASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGGYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
EIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRW
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAI
HCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
GMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHC
DRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKYFAGSFYRGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKKGLNR
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
ASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGGYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
EIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRW
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAI
HCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
GMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHC
DRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKYFAGSFYRGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]