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The map label for this gene is hslR [H]

Identifier: 161870024

GI number: 161870024

Start: 1038875

End: 1039276

Strand: Reverse

Name: hslR [H]

Synonym: NMCC_1057

Alternate gene names: 161870024

Gene position: 1039276-1038875 (Counterclockwise)

Preceding gene: 161870034

Following gene: 161870016

Centisome position: 48.26

GC content: 52.74

Gene sequence:

>402_bases
ATGAAAGACAAGCACGATTCTTCCGCCATGCGGCTGGACAAATGGCTTTGGGCGGCACGTTTTTTCAAGACCCGTTCCCT
TGCGCAAAAGCACATCGAACTGGGTAGGGTTCAAGTAAACGGCTCGAAGGTCAAAAACAGTAAAACCATAGACATCGGCG
ATATTATCGACCTGACGCTCAATTCCCTTCCCTATAAAATCAAGGTTAAAGGTTTGAACCACCAACGCCGCCCGGCATCC
GAGGCGCGGCTTCTGTATGAAGAGGACGCGAAAACGGCAACATTGAGGGAAGAGCGCAAACAGCTCGACCAATTCAGCCG
CATCACTTCCGCCTATCCCGACGGCAGACCGACCAAGCGCGACCGCCGCCAACTGGACAGGCTGAAAAAAGGAGACTGGT
AA

Upstream 100 bases:

>100_bases
GACAGCATGGAAAACAGTGGATTAGTGCATATATACTAGTTATAGGCGGCGTATCTTATGCTAAACTTGAAACAAATTCA
ATTATTTCAAACAAAATCGT

Downstream 100 bases:

>100_bases
AACCATTCCCGCCGCAAACAGAAGCACGAACCGCGTACCGCCGCATTTCAGACGGCATTCCCGAAACTTATTCCGCCTCG
TCTATCCATGCCTGCTGCAC

Product: ribosome-associated heat shock protein Hsp15

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKVKNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPAS
EARLLYEEDAKTATLREERKQLDQFSRITSAYPDGRPTKRDRRQLDRLKKGDW

Sequences:

>Translated_133_residues
MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKVKNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPAS
EARLLYEEDAKTATLREERKQLDQFSRITSAYPDGRPTKRDRRQLDRLKKGDW
>Mature_133_residues
MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKVKNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPAS
EARLLYEEDAKTATLREERKQLDQFSRITSAYPDGRPTKRDRRQLDRLKKGDW

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=132, Percent_Identity=45.4545454545455, Blast_Score=111, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15591; Mature: 15591

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKVKNSKTIDIGDIIDLTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCHHHHHHHHH
NSLPYKIKVKGLNHQRRPASEARLLYEEDAKTATLREERKQLDQFSRITSAYPDGRPTKR
CCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
DRRQLDRLKKGDW
HHHHHHHHHCCCC
>Mature Secondary Structure
MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKVKNSKTIDIGDIIDLTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCHHHHHHHHH
NSLPYKIKVKGLNHQRRPASEARLLYEEDAKTATLREERKQLDQFSRITSAYPDGRPTKR
CCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
DRRQLDRLKKGDW
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]