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The map label for this gene is crtB [H]

Identifier: 161870016

GI number: 161870016

Start: 1032539

End: 1033411

Strand: Reverse

Name: crtB [H]

Synonym: NMCC_1049

Alternate gene names: 161870016

Gene position: 1033411-1032539 (Counterclockwise)

Preceding gene: 161870024

Following gene: 161870015

Centisome position: 47.99

GC content: 53.84

Gene sequence:

>873_bases
GTGAAAGGACTCGACTATTGCCGTCAAAAAGCAGAAGAAAGCCGCTCCAGTTTTTTATCGGGCTTCCGTTTCCTGACTCA
GGAAAAACGGGATGCGGTAACGATTTTATATGCCTTTTGCCGCGAATTGGACGATGTGGTTGACGAATGTTCCAACCCCG
ATGTTGCACAGGCAACATTGAACTGGTGGCGCGGCGATTTGGACAAGGTATTCGGCGGCGCGATGCCGGAACACCCCGTC
AATCAGGCCTTGCGGCAGGTTAAGGAAACCTTCAAGCTGCCGAAATATGAACTGGAAGCCTTAATCGACGGGATGCAGAT
GGATTTGGTTCAGGCGCGTTACGGCAGTTTTGAGGAATTGAAACTGTATTGCCACCGCGTCGCAGGCGTAGTCGGCTACC
TGATTGCGCGGATTTTGGGGTTTTCAGACGGCAAAACGCTGCAATACGCCGACAAGATGGGACTTGCGCTGCAACTGACC
AACATCATCCGCGATGTCGGCGAAGACGCGCGCAGGGGACGGATTTACCTGCCGATGGAGGAAATGCAGCGGTTTGATGT
CCCCGCAAGCGTGATTTTGCAATGCAGCCCGACGGGCAATTTTGCCGAATTGATGGCGTTCCAAATCAAACGCGCCCGTG
AAACCTACCGCGAAGCCGTATCGCTGCTGCCGGCTGCCGATAAAAAAGCCCAAAAAGTCGGACTGGTTATGGCGGCGGTT
TATTACGAGCTATTGAACGAAATCGACCGGGACGGCGCGCAAAACGTCCTCAAATACAAAATCGCCCTCCCTTCGCCGCG
CAAAAAACGCATTGCCCTGAAAACCTGGTTATTCGGATTCAAACCGCGCCCCGGCACGCCGGAACGGGCATAA

Upstream 100 bases:

>100_bases
GAGCAAACCGCTAAGGATTGGGTCGTGCCGCCGAAATTGCCCTCTACCGCCAAATGCCGATAAAATCCGCCTTTCCCGCC
CATCATTAGGAATATAAATC

Downstream 100 bases:

>100_bases
GGCGCATACCGCCCGCCCTTCAGGAAAACCCAACCCCCGCCGCCCCGAAAAACGGGGTTTCAACCATTGGAGGAATAAAT
GATGAACACGCCGCATCCGC

Product: phytoene synthase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPV
NQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELKLYCHRVAGVVGYLIARILGFSDGKTLQYADKMGLALQLT
NIIRDVGEDARRGRIYLPMEEMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPAADKKAQKVGLVMAAV
YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFGFKPRPGTPERA

Sequences:

>Translated_290_residues
MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPV
NQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELKLYCHRVAGVVGYLIARILGFSDGKTLQYADKMGLALQLT
NIIRDVGEDARRGRIYLPMEEMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPAADKKAQKVGLVMAAV
YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFGFKPRPGTPERA
>Mature_290_residues
MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPV
NQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELKLYCHRVAGVVGYLIARILGFSDGKTLQYADKMGLALQLT
NIIRDVGEDARRGRIYLPMEEMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPAADKKAQKVGLVMAAV
YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFGFKPRPGTPERA

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 32990; Mature: 32990

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNPDVAQATL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
NWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEEL
HHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
KLYCHRVAGVVGYLIARILGFSDGKTLQYADKMGLALQLTNIIRDVGEDARRGRIYLPME
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCEEEECHH
EMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPAADKKAQKVGLVMAAV
HHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFGFKPRPGTPERA
HHHHHHHHCCCHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNPDVAQATL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
NWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEEL
HHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
KLYCHRVAGVVGYLIARILGFSDGKTLQYADKMGLALQLTNIIRDVGEDARRGRIYLPME
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCEEEECHH
EMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPAADKKAQKVGLVMAAV
HHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFGFKPRPGTPERA
HHHHHHHHCCCHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8018713; 8905231 [H]