Click here to switch to the map view.

The map label for this gene is yqgC [H]

Identifier: 161869844

GI number: 161869844

Start: 878114

End: 878602

Strand: Reverse

Name: yqgC [H]

Synonym: NMCC_0875

Alternate gene names: 161869844

Gene position: 878602-878114 (Counterclockwise)

Preceding gene: 161869845

Following gene: 161869843

Centisome position: 40.8

GC content: 57.87

Gene sequence:

>489_bases
ATGACCGTACTGACCGTCATCCTCGCCCTCGCCCTGATAGCCGTCGGCACGGCGGGCATCGTTTACCCCGCCCTGCCCGG
ATTGGCATTGATGTTTGCCGGAACATGGCTGCTTGCCTACTCCGGCGGCTACCAAATCTACGGCGCAGGTGTTTTGTGGA
CGGTCGGACTCATCAGCCTTGCCGGCATACTGGCGGACTATGTGGCAGGCATATTGGGGGTAAAATATACCGGAGCGGGC
AGGCTCGCCGTTCGCGGCGCATTGGTCGGCAGCATCGTCGGCATATTTTTCTCCCTTCCCGGACTAATACTCGGCCCCTT
TATCGGCGCGGCGGCAGGCGAACTCATCGACAGACGCAATATGCTTCAGGCAGGTAAAGCGGGCTTGGGTACGCTGTTGG
GGCTTATCGTCGGTACGGCGTTCAAAATCGGCTGCGCCGTATCCATCTTGTTTATCCTGTTGGTGAAATACATCGCCTAC
CTGTTTTAA

Upstream 100 bases:

>100_bases
CGCCTCAATACGCACACCGCCATACGGGGCGGAATCCTGCAAGAAGAATGCCGCGCCGTATTAAGCCGTTTTTTTCAGAA
CAAAAGAAAAGGTTGAACCT

Downstream 100 bases:

>100_bases
CCCCTTCAGACGGCATACGGATAAATTGCTATAATGCCGTCTGAAATTTCCGACAAAGCACCATCATGGCAAACCAAAGA
CCCATCTACGGCTTCCACGC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTVLTVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYSGGYQIYGAGVLWTVGLISLAGILADYVAGILGVKYTGAG
RLAVRGALVGSIVGIFFSLPGLILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLIVGTAFKIGCAVSILFILLVKYIAY
LF

Sequences:

>Translated_162_residues
MTVLTVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYSGGYQIYGAGVLWTVGLISLAGILADYVAGILGVKYTGAG
RLAVRGALVGSIVGIFFSLPGLILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLIVGTAFKIGCAVSILFILLVKYIAY
LF
>Mature_161_residues
TVLTVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYSGGYQIYGAGVLWTVGLISLAGILADYVAGILGVKYTGAGR
LAVRGALVGSIVGIFFSLPGLILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLIVGTAFKIGCAVSILFILLVKYIAYL
F

Specific function: Unknown

COG id: COG2839

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007403 [H]

Pfam domain/function: PF04306 DUF456 [H]

EC number: NA

Molecular weight: Translated: 16491; Mature: 16360

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLTVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYSGGYQIYGAGVLWTVGLISL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH
AGILADYVAGILGVKYTGAGRLAVRGALVGSIVGIFFSLPGLILGPFIGAAAGELIDRRN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLQAGKAGLGTLLGLIVGTAFKIGCAVSILFILLVKYIAYLF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TVLTVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYSGGYQIYGAGVLWTVGLISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH
AGILADYVAGILGVKYTGAGRLAVRGALVGSIVGIFFSLPGLILGPFIGAAAGELIDRRN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLQAGKAGLGTLLGLIVGTAFKIGCAVSILFILLVKYIAYLF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]