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The map label for this gene is speE [H]

Identifier: 161869803

GI number: 161869803

Start: 832161

End: 832952

Strand: Reverse

Name: speE [H]

Synonym: NMCC_0826

Alternate gene names: 161869803

Gene position: 832952-832161 (Counterclockwise)

Preceding gene: 161869810

Following gene: 161869802

Centisome position: 38.68

GC content: 53.66

Gene sequence:

>792_bases
ATGGCAAGACATCCCTACCGCCGCCTGCGTCCTGCAAAATCCAGCTTTCCCGAAGTCGGCATTTCCGAAGAAGGCAATAT
CCGTTCGCTTCACTTGGGCAGCGACACCATCCAAAGCTCAATGAACCTCGACCACCCGTCCGAGCTGGTACTCTCTTACA
GCCGTGCCATGATGGGATGGCTGCTGTTTACCGACGCTCTTCCGCAGCATATCACCCAAATCGGCTTGGGCGGCGGTTCG
TTTGCACGCTGGATAGACACCTACCTGCCCGACACGCGCCAAACCGCCGTGGACATCAACCCGCAGGTTATCGCCATTGC
CCGCAACCTGTTTGAGTTGCCTTTCGAGGGCGAGAAATTTGAAATTATTGAAGCAGACGGTGCGGAATATATCAAAGTCT
TCCGCCACAACACCGATGTGATTTTGGTGGACGGGTTCGACGGCGAACAAATCATCGATGCGCTGGTTGAAGAACCGTTT
TTCCGAGACTGCCGAAACGCACTCTCTTCAGACGGCATATTCGTAACCAACTGGTGGAGCGGCGACAAACGCTACCAACG
CTTCATCGAACGGTTGTTGAGCGTTTTTGAAGGGCGCGTCTTGGAACTTCCTGCCGAAAGCCACGGCAATGTCGCGGTAA
TGGCCTTCCAAAGCAGCCCCAAAGAGCAAAACATAGACAAACTCAAAAAACGTGCCGACAAACTGAGCAACGCATACGGA
TTGGACTTCCACCGTATGCTTGCCGGCCTGAAAGCGTCCAACCCCAACAACGGCAAGCATTTCCACCTTTAA

Upstream 100 bases:

>100_bases
ATCCGAATAAGTAATTTATTTGAAAAGAAATTAATTTGAAGCAGGACAACCATCGGCATTCTGATAAAATATCTGCCTTT
CAAACCGACCGTTCACACCG

Downstream 100 bases:

>100_bases
GCAACTATCTTCACGGCTGCATTGGAACATGCGGAAAATCAAGAGGAAATCATTATGCTGAAACCCGAAACCATACACAT
ATCCGGTCCTGCCGGCATTT

Product: spermidine synthase

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MARHPYRRLRPAKSSFPEVGISEEGNIRSLHLGSDTIQSSMNLDHPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGS
FARWIDTYLPDTRQTAVDINPQVIAIARNLFELPFEGEKFEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPF
FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQSSPKEQNIDKLKKRADKLSNAYG
LDFHRMLAGLKASNPNNGKHFHL

Sequences:

>Translated_263_residues
MARHPYRRLRPAKSSFPEVGISEEGNIRSLHLGSDTIQSSMNLDHPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGS
FARWIDTYLPDTRQTAVDINPQVIAIARNLFELPFEGEKFEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPF
FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQSSPKEQNIDKLKKRADKLSNAYG
LDFHRMLAGLKASNPNNGKHFHL
>Mature_262_residues
ARHPYRRLRPAKSSFPEVGISEEGNIRSLHLGSDTIQSSMNLDHPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSF
ARWIDTYLPDTRQTAVDINPQVIAIARNLFELPFEGEKFEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPFF
RDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQSSPKEQNIDKLKKRADKLSNAYGL
DFHRMLAGLKASNPNNGKHFHL

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 29778; Mature: 29647

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARHPYRRLRPAKSSFPEVGISEEGNIRSLHLGSDTIQSSMNLDHPSELVLSYSRAMMGW
CCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHH
LLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQVIAIARNLFELPFEGEKF
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCEE
EIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPFFRDCRNALSSDGIFVTNWWS
EEEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECC
GDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQSSPKEQNIDKLKKRADKLSNAYG
CCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
LDFHRMLAGLKASNPNNGKHFHL
CCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ARHPYRRLRPAKSSFPEVGISEEGNIRSLHLGSDTIQSSMNLDHPSELVLSYSRAMMGW
CCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHH
LLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQVIAIARNLFELPFEGEKF
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCEE
EIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPFFRDCRNALSSDGIFVTNWWS
EEEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECC
GDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQSSPKEQNIDKLKKRADKLSNAYG
CCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
LDFHRMLAGLKASNPNNGKHFHL
CCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]