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The map label for this gene is wbpC

Identifier: 161869379

GI number: 161869379

Start: 388884

End: 390761

Strand: Direct

Name: wbpC

Synonym: NMCC_0386

Alternate gene names: NA

Gene position: 388884-390761 (Clockwise)

Preceding gene: 161869378

Following gene: 161869380

Centisome position: 18.06

GC content: 53.09

Gene sequence:

>1878_bases
ATGAGCCAAGCCTTACCCTACCGCCCGGACATCGACATATTGCGCGCCGCCGCCGTCTTATCCGTCATCGTGTTCCATAT
CGAAAAGGATTGGCTGCCGGGCGGGTTTCTCGGTGTCGATATATTCTTTGTGATTTCAGGCTTTTTGATGACGACGATTC
TTCACCGCGAAATGTCGGGGGGGGGGAGGTTTTCCCTGAAGGCATTTTATATCCGCCGCATCAAGCGGATTCTGCCCGCA
TTTTTCGCCGTATTGGCGGCAACGCTGGCAGGCGGCTTCTTTTTATTCACCAAAGATGATTTCTTTCTTTTATGGAAATC
CGCGCTGACCGCCTTGGGTTTCGCCTCTAACCTGTATTTTGCAAGGGGGAAGGATTATTTCGATCCCGCGCAGGAAGAAA
AGCCCCTGCTGCACATCTGGTCTTTGTCGGTCGAAGAACAATTTTACTTTGTCTTTCCGATACTGCTGCTGCTTGTCGCC
CGCAAAAGCCTGCGCGTACAGTTCGGCTTCCTTGCCGCACTGTGTGCCTTAAGCCTTGCCGCCTCCTTTATACCTTCCGC
GCTCGATAAATATTACCTGCCCCACCTGCGCGCCTGCGAATTACTGATAGGATCGCTGACCGCCGTGTGGATGCGGTACC
GGCAACAGCGGAATCTCGCCGTCGGCAGATGCTGTGCCGCCGCCGGCGCATTGTTTTCCGCGTGCATACTGTCCGCCTGC
CTGTTTGCCTATTCGGAACAAACCGCCTATTTCCCGGGGCCCGCCGCTTTGATTCCCTGTCTGGCTGTTGCCGCGCTGAT
TTATTTCAATCATTACGAACACCCGCTTAAAAAATTTTTCCAATGGAAAATTACCGTTGCCGCCGGTTTGATTTCCTATT
CGCTTTATCTGTGGCATTGGCCGATATTGGCCTTTATGCGCTATATCGGCCCGGACAACCTGCCGCCTTATTCGCCGGCG
GCAGCAATCGTCCTGATGGTGGTACTTTCCTTGATTTCTTATTTCTGCATCGAAAAGCCGTTTAAAAAATGGAAAGGTTC
GTTCGCACAATCCGTTTTATGGATTTATGCCTTGCCTATGCTCATTTTGGGGGCGGGCTCGTTTTTCGCGATGAGGTTGC
CGTTTATGGCGCAATACGACCGTTTGGGGCTGACGCGTTCCAACACCTCCTGCCACAACAATACCGGCAAACAATGCCTA
TGGGGGGATACGGAAAAACAGCCGGAACTGCTCATTTTGGGCGACTCCCACGCCGACCATTACAAAACATTCTTCGATGC
CGTGGGGAAAAAAGAAAAATGGTCCGCCACTATGGTTTCCGCCGACGCTTGCGCCTATGTGGAAGGCTACGCGTCCCGCG
TGTTCCAAAACTGGGCCGCCTGCCGCGCCGTTTACCGCTATGCCGAAGAACACCTGCCCCGGTATCCGAAAGTGGTTTTG
GCGATGCGCTGGGGCAGCCAGATGCCCGAAAACAGCCGCTCCCTTGCCTACGATGCCGGTTTTTTCCAAAAATTCGACCG
TATGCTGCACAAACTCTCATCCGAAAAACAAGCCGTTTACCTGATGGCGGACAACCTTGCCTCGTCTTACAACGTCCAGC
GCGCCTATATCTTGTCTTCACGCATACCGGGTTACCGCCAAACCCTGCGCCCGGACGACGAAAGCACCCTGAAAGCCAAT
GCACGCATCAGGGAATTGGCAGCCAAATACCCCAACGTCTATATTATTGATGCCGCCGCCTATATCCCCGCAGATTTTCA
AATCGGCGGATTGCCGGTTTACTCGGACACAGACCACATCAACCCTTACGGCGGCACGGAATTGGCAAAGCGTTTTTCCG
AAAAACAACGGTTTCTCAATACGCGCCATAACCATTGA

Upstream 100 bases:

>100_bases
CCGATTCACTTGGTGCTTCAGCACCTTAGAGAATCGTTCTCTTTGAGCTAAGGCGAGGCAACGCCGTACTGGTTTAAATT
TAATCCACTATAAAAACATT

Downstream 100 bases:

>100_bases
TTCGCTTAAATTTGTTACAATCGGCGGTTTGCAAAAACGCTAATTTTTTTGAAAGAGACCGATGAGCGTCATCCAAGACC
TGCAATCGCGCGACCTTATC

Product: lipopolysaccharide biosynthesis protein WbpC, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 625; Mature: 624

Protein sequence:

>625_residues
MSQALPYRPDIDILRAAAVLSVIVFHIEKDWLPGGFLGVDIFFVISGFLMTTILHREMSGGGRFSLKAFYIRRIKRILPA
FFAVLAATLAGGFFLFTKDDFFLLWKSALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVA
RKSLRVQFGFLAALCALSLAASFIPSALDKYYLPHLRACELLIGSLTAVWMRYRQQRNLAVGRCCAAAGALFSACILSAC
LFAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLKKFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPA
AAIVLMVVLSLISYFCIEKPFKKWKGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQCL
WGDTEKQPELLILGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGYASRVFQNWAACRAVYRYAEEHLPRYPKVVL
AMRWGSQMPENSRSLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQTLRPDDESTLKAN
ARIRELAAKYPNVYIIDAAAYIPADFQIGGLPVYSDTDHINPYGGTELAKRFSEKQRFLNTRHNH

Sequences:

>Translated_625_residues
MSQALPYRPDIDILRAAAVLSVIVFHIEKDWLPGGFLGVDIFFVISGFLMTTILHREMSGGGRFSLKAFYIRRIKRILPA
FFAVLAATLAGGFFLFTKDDFFLLWKSALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVA
RKSLRVQFGFLAALCALSLAASFIPSALDKYYLPHLRACELLIGSLTAVWMRYRQQRNLAVGRCCAAAGALFSACILSAC
LFAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLKKFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPA
AAIVLMVVLSLISYFCIEKPFKKWKGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQCL
WGDTEKQPELLILGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGYASRVFQNWAACRAVYRYAEEHLPRYPKVVL
AMRWGSQMPENSRSLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQTLRPDDESTLKAN
ARIRELAAKYPNVYIIDAAAYIPADFQIGGLPVYSDTDHINPYGGTELAKRFSEKQRFLNTRHNH
>Mature_624_residues
SQALPYRPDIDILRAAAVLSVIVFHIEKDWLPGGFLGVDIFFVISGFLMTTILHREMSGGGRFSLKAFYIRRIKRILPAF
FAVLAATLAGGFFLFTKDDFFLLWKSALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVAR
KSLRVQFGFLAALCALSLAASFIPSALDKYYLPHLRACELLIGSLTAVWMRYRQQRNLAVGRCCAAAGALFSACILSACL
FAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLKKFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPAA
AIVLMVVLSLISYFCIEKPFKKWKGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQCLW
GDTEKQPELLILGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGYASRVFQNWAACRAVYRYAEEHLPRYPKVVLA
MRWGSQMPENSRSLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQTLRPDDESTLKANA
RIRELAAKYPNVYIIDAAAYIPADFQIGGLPVYSDTDHINPYGGTELAKRFSEKQRFLNTRHNH

Specific function: Unknown

COG id: COG1835

COG function: function code I; Predicted acyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyltransferase 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI193203181, Length=557, Percent_Identity=25.4937163375224, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI17541412, Length=373, Percent_Identity=29.4906166219839, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17539118, Length=385, Percent_Identity=28.3116883116883, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17559158, Length=468, Percent_Identity=27.1367521367521, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI193203179, Length=567, Percent_Identity=24.8677248677249, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17509001, Length=568, Percent_Identity=23.4154929577465, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17507167, Length=417, Percent_Identity=26.1390887290168, Blast_Score=122, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17542538, Length=383, Percent_Identity=27.4151436031332, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17507735, Length=360, Percent_Identity=30.2777777777778, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI212640769, Length=391, Percent_Identity=26.8542199488491, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17507733, Length=328, Percent_Identity=31.7073170731707, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17560876, Length=354, Percent_Identity=27.683615819209, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17507283, Length=378, Percent_Identity=26.984126984127, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17507287, Length=349, Percent_Identity=28.6532951289398, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71983744, Length=323, Percent_Identity=30.9597523219814, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17540232, Length=588, Percent_Identity=24.4897959183673, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17532481, Length=491, Percent_Identity=26.8839103869654, Blast_Score=102, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71988046, Length=373, Percent_Identity=28.9544235924933, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17541414, Length=174, Percent_Identity=36.2068965517241, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17562866, Length=331, Percent_Identity=28.7009063444109, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI193208811, Length=179, Percent_Identity=35.195530726257, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17559544, Length=360, Percent_Identity=27.5, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17507299, Length=182, Percent_Identity=36.8131868131868, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17507289, Length=182, Percent_Identity=36.8131868131868, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17542762, Length=361, Percent_Identity=26.0387811634349, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17543924, Length=320, Percent_Identity=29.6875, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI212646204, Length=364, Percent_Identity=28.021978021978, Blast_Score=93, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71984481, Length=350, Percent_Identity=26.5714285714286, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17541014, Length=576, Percent_Identity=24.8263888888889, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI86562056, Length=318, Percent_Identity=26.4150943396226, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562856, Length=323, Percent_Identity=30.3405572755418, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI133903927, Length=410, Percent_Identity=24.8780487804878, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17541016, Length=356, Percent_Identity=29.4943820224719, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17531875, Length=339, Percent_Identity=28.6135693215339, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562864, Length=328, Percent_Identity=28.3536585365854, Blast_Score=87, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17506687, Length=174, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI115534354, Length=161, Percent_Identity=36.6459627329193, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71990417, Length=356, Percent_Identity=25, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32567150, Length=170, Percent_Identity=35.8823529411765, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193208625, Length=391, Percent_Identity=25.3196930946292, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193206646, Length=295, Percent_Identity=30.8474576271186, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002656
- InterPro:   IPR013830
- InterPro:   IPR013831 [H]

Pfam domain/function: PF01757 Acyl_transf_3 [H]

EC number: NA

Molecular weight: Translated: 70776; Mature: 70645

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQALPYRPDIDILRAAAVLSVIVFHIEKDWLPGGFLGVDIFFVISGFLMTTILHREMSG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GGRFSLKAFYIRRIKRILPAFFAVLAATLAGGFFLFTKDDFFLLWKSALTALGFASNLYF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCEE
ARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVARKSLRVQFGFLAALCALSLA
ECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASFIPSALDKYYLPHLRACELLIGSLTAVWMRYRQQRNLAVGRCCAAAGALFSACILSAC
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LFAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLKKFFQWKITVAAGLISYSLYLWHW
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILAFMRYIGPDNLPPYSPAAAIVLMVVLSLISYFCIEKPFKKWKGSFAQSVLWIYALPM
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILGAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQCLWGDTEKQPELLILGDSHADH
HHHCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCHH
YKTFFDAVGKKEKWSATMVSADACAYVEGYASRVFQNWAACRAVYRYAEEHLPRYPKVVL
HHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEE
AMRWGSQMPENSRSLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYILSS
EEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHEEEHH
RIPGYRQTLRPDDESTLKANARIRELAAKYPNVYIIDAAAYIPADFQIGGLPVYSDTDHI
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCEECCEECCCCCCCC
NPYGGTELAKRFSEKQRFLNTRHNH
CCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SQALPYRPDIDILRAAAVLSVIVFHIEKDWLPGGFLGVDIFFVISGFLMTTILHREMSG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GGRFSLKAFYIRRIKRILPAFFAVLAATLAGGFFLFTKDDFFLLWKSALTALGFASNLYF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCEE
ARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVARKSLRVQFGFLAALCALSLA
ECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASFIPSALDKYYLPHLRACELLIGSLTAVWMRYRQQRNLAVGRCCAAAGALFSACILSAC
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LFAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLKKFFQWKITVAAGLISYSLYLWHW
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILAFMRYIGPDNLPPYSPAAAIVLMVVLSLISYFCIEKPFKKWKGSFAQSVLWIYALPM
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILGAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQCLWGDTEKQPELLILGDSHADH
HHHCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCHH
YKTFFDAVGKKEKWSATMVSADACAYVEGYASRVFQNWAACRAVYRYAEEHLPRYPKVVL
HHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEE
AMRWGSQMPENSRSLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYILSS
EEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHEEEHH
RIPGYRQTLRPDDESTLKANARIRELAAKYPNVYIIDAAAYIPADFQIGGLPVYSDTDHI
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCEECCEECCCCCCCC
NPYGGTELAKRFSEKQRFLNTRHNH
CCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA