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The map label for this gene is xylR [C]

Identifier: 161869337

GI number: 161869337

Start: 343203

End: 344159

Strand: Direct

Name: xylR [C]

Synonym: NMCC_0343

Alternate gene names: 161869337

Gene position: 343203-344159 (Clockwise)

Preceding gene: 161869331

Following gene: 161869347

Centisome position: 15.94

GC content: 61.96

Gene sequence:

>957_bases
ATGAACACCGCCGCCATCTACCGCCAGTACCAAACCTATGTCCGCTCCGATAAATCCGGCTGGGCGTTGGACGGCTGTTC
CGACAGCGCGCTCATTGCGCAGGCAAAACAGCCCGGTTTGCATCTGGAAATGTGCATCAACCGCTTCGACTCGGGCATCA
CCTTGTCGCGGATGCGCGGCGGCGGAACGGGCGCGTTTCCCACCGAAATCCACAATTTCAGCCACAACTGCGCCTTGTTC
GTCATGGTGTCGGGGCAGAACCGGTTACAAATGGGCGGCAGGGAATACCGCCCATCTGCCGGCGAAATCTGGCTGGTACG
CGGCGAGTTGGCGGACGTATCCGAAACCCTGCTGCCCGACAACAGCGGCATGTGCGCGCTGCATTTGGATTTTTCGCTGG
AAAAACTGCGCCGCTGGCACGACGAAGGCTTGCTGGACGAACGCCTGTTTTCGCCGCAAACGATAGGCCGATTCGCCCTG
CAACGGCTGGCGCAAAACGCAGCGGCACTGACGGCGGCGGCCTGCCCACTGCTGCAACGCCCGTTCGAATCGGACGGCTT
CGGCCTGCTTGCCGACGAAGCCGCCGCGCTGGAACTCTCCGCCCGATTATTGCGCTTCACCTTCCGCCGCCACGACAACG
GTTACCGCCGTCGGCGCATAGACGAAGCCGCCGACATCCTGCAACACGAATTCGCCCGTCCGCTGACCATCGCCGAAATC
GCCCGCCGCGTCGGACTGAACGAATGCTACCTGAAACGCTATTTCAAAGCGCAAACCGGCGAAACCGTCGCCGGATGCCT
GCGCCGCCTGCGGCTGGAACACGCGCTCGCCCTCATCGAATCCGGCAGCACCGTCCAAGCCGCCATGCACTTTTGCGGCT
ACCGCCACGCGGGACGGTTCAACGAAGCGTTCAGACGGCATTACGGATTTTTGCCTTCGGATGTGAAGAAGTGCTGA

Upstream 100 bases:

>100_bases
CTTTCAGACGACCTTTTCCGTTTCAACCAATCCCTGCGCTTGATTATTGGTAATAATTCCTATTTAATTCATTTGTTAGA
CAACTCGTTCCTATCCAATC

Downstream 100 bases:

>100_bases
TGGGGCCGGCGGCATAGATATTTTGATTTGAAACAACCATTAAAAAAGGTCGTCTGAAAAAGCAGTTTCAGACGACCTTT
TTTCATTCGCGGCGGCAGTG

Product: AraC family transcription regulator

Products: NA

Alternate protein names: Helix-Turn-Helix AraC Domain-Containing Protein; AraC Family Transcription Regulator; Helix-Turn-Helix- Domain-Containing Protein AraC Type; AraC Family Transcriptional Regulator

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEMCINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALF
VMVSGQNRLQMGGREYRPSAGEIWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
QRLAQNAAALTAAACPLLQRPFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRRRIDEAADILQHEFARPLTIAEI
ARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHALALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC

Sequences:

>Translated_318_residues
MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEMCINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALF
VMVSGQNRLQMGGREYRPSAGEIWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
QRLAQNAAALTAAACPLLQRPFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRRRIDEAADILQHEFARPLTIAEI
ARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHALALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC
>Mature_318_residues
MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEMCINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALF
VMVSGQNRLQMGGREYRPSAGEIWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
QRLAQNAAALTAAACPLLQRPFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRRRIDEAADILQHEFARPLTIAEI
ARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHALALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC

Specific function: Regulatory Protein For The Xylbafghr Operon. [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35758; Mature: 35758

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEMCINRFDSGITLSRMRG
CCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHCCCCCCHHHHHHHHHCCCCEEEHCCC
GGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGEIWLVRGELADVSETLLPD
CCCCCCCHHHHCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCEEEEECCHHHHHHHHCCC
NSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFALQRLAQNAAALTAAACPLLQR
CCCEEEEEECCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRRRIDEAADILQHEFARPLTIAEI
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
ARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHALALIESGSTVQAAMHFCGYRHAGRF
HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHH
NEAFRRHYGFLPSDVKKC
HHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEMCINRFDSGITLSRMRG
CCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHCCCCCCHHHHHHHHHCCCCEEEHCCC
GGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGEIWLVRGELADVSETLLPD
CCCCCCCHHHHCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCEEEEECCHHHHHHHHCCC
NSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFALQRLAQNAAALTAAACPLLQR
CCCEEEEEECCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRRRIDEAADILQHEFARPLTIAEI
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
ARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHALALIESGSTVQAAMHFCGYRHAGRF
HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHH
NEAFRRHYGFLPSDVKKC
HHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA