Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010084 |
Length | 3,448,466 |
Click here to switch to the map view.
The map label for this gene is 161525702
Identifier: 161525702
GI number: 161525702
Start: 2750578
End: 2751360
Strand: Reverse
Name: 161525702
Synonym: Bmul_2533
Alternate gene names: NA
Gene position: 2751360-2750578 (Counterclockwise)
Preceding gene: 161525703
Following gene: 161525701
Centisome position: 79.79
GC content: 71.9
Gene sequence:
>783_bases ATGATGGACGAGTCGCGCACACCTTCGGACGATCGGGACGACGAAGCGTCGGCGCAGCTACTGTCGGCGCTGCTCGACGG CGAGCTGTCCGCGCACGAACGCCGCGAGGTACTCGAACGTCTGCAGTCGGATCCGCGCGAAGCGGACCGGTTCGCGCATT ACCGCGCCCAGCGCGACGCACTGCACGCGTTGTTTCCGCTGCCGCCCGCCACGTCGGCGCTGTTCGTGCAGCGCCGCGCA TCGCGCCGGCCCAGATTCGCCTACGCGCTCGCAGGGCTCGCGGCCGGGCTGCTGATCGGCATCGCGCTGCACGCGGGCTG GACTGCACTGGGTGCTGCCCCGGAATTCGCTACGCGCGCCGATGCGGCGTACGCTGTCTATGCGGCCGACCGCGACCATC CGGTGGAAGTCGATGCGCGCGACCCGGAGCGTCTGGCTGCGTGGCTGTCCGCGCGGCTCGGGCGGTCGGTGCGCGCGCCG TCGCTCGCCGAATACGGCTACGCGCTGCTCGGCGGCCGTCTGCTGCCCGGCGACGCAGGGCCGGCCGCACAACTGATGTA CCAGCGCGCGGACGGCGACCGCGTGACGCTCTACATGACCGGCTACGACGCATGGCGCGTGGCGCCGCAGCCGTTATCGG CCGACGGTCGCTACACGTACTTCTGGTCCGATCGCGGCATGGGTTATGCGCTGTCCGGCGGTGGCGACGAACGGCGCGTT CGCGAGCTCGCGATCGAGGCGTGCGGCGCACTCGGCGGACCGGTCGGCGCGTGGAGCGGCTGA
Upstream 100 bases:
>100_bases TGATGTCGCGGTTATCGCGCGCGAGAGAGCAGATGCGGGCGCTGCTGTCCGGCGAACCGGTCACGCATGGCACGGCCGCG TTACGGGTGATCAGGAAGAC
Downstream 100 bases:
>100_bases CGCGCGCTCGCACGGAGCGAACGATGAAAGCGATGGCGGCGGTATGGGCAGGGCTGGTTGTGCTCGCAGCAGGCACCGGA TTTGCGTACGCGGACGACGA
Product: putative transmembrane anti-sigma factor
Products: NA
Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Regulator; Transmembrane Protein; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Transmembrane Regulator PrtR; Transmembrane Transcription Regulator
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MMDESRTPSDDRDDEASAQLLSALLDGELSAHERREVLERLQSDPREADRFAHYRAQRDALHALFPLPPATSALFVQRRA SRRPRFAYALAGLAAGLLIGIALHAGWTALGAAPEFATRADAAYAVYAADRDHPVEVDARDPERLAAWLSARLGRSVRAP SLAEYGYALLGGRLLPGDAGPAAQLMYQRADGDRVTLYMTGYDAWRVAPQPLSADGRYTYFWSDRGMGYALSGGGDERRV RELAIEACGALGGPVGAWSG
Sequences:
>Translated_260_residues MMDESRTPSDDRDDEASAQLLSALLDGELSAHERREVLERLQSDPREADRFAHYRAQRDALHALFPLPPATSALFVQRRA SRRPRFAYALAGLAAGLLIGIALHAGWTALGAAPEFATRADAAYAVYAADRDHPVEVDARDPERLAAWLSARLGRSVRAP SLAEYGYALLGGRLLPGDAGPAAQLMYQRADGDRVTLYMTGYDAWRVAPQPLSADGRYTYFWSDRGMGYALSGGGDERRV RELAIEACGALGGPVGAWSG >Mature_260_residues MMDESRTPSDDRDDEASAQLLSALLDGELSAHERREVLERLQSDPREADRFAHYRAQRDALHALFPLPPATSALFVQRRA SRRPRFAYALAGLAAGLLIGIALHAGWTALGAAPEFATRADAAYAVYAADRDHPVEVDARDPERLAAWLSARLGRSVRAP SLAEYGYALLGGRLLPGDAGPAAQLMYQRADGDRVTLYMTGYDAWRVAPQPLSADGRYTYFWSDRGMGYALSGGGDERRV RELAIEACGALGGPVGAWSG
Specific function: Unknown
COG id: COG5662
COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28190; Mature: 28190
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDESRTPSDDRDDEASAQLLSALLDGELSAHERREVLERLQSDPREADRFAHYRAQRDA CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LHALFPLPPATSALFVQRRASRRPRFAYALAGLAAGLLIGIALHAGWTALGAAPEFATRA HHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHC DAAYAVYAADRDHPVEVDARDPERLAAWLSARLGRSVRAPSLAEYGYALLGGRLLPGDAG CCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEECCCCCC PAAQLMYQRADGDRVTLYMTGYDAWRVAPQPLSADGRYTYFWSDRGMGYALSGGGDERRV HHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHH RELAIEACGALGGPVGAWSG HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MMDESRTPSDDRDDEASAQLLSALLDGELSAHERREVLERLQSDPREADRFAHYRAQRDA CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LHALFPLPPATSALFVQRRASRRPRFAYALAGLAAGLLIGIALHAGWTALGAAPEFATRA HHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHC DAAYAVYAADRDHPVEVDARDPERLAAWLSARLGRSVRAPSLAEYGYALLGGRLLPGDAG CCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEECCCCCC PAAQLMYQRADGDRVTLYMTGYDAWRVAPQPLSADGRYTYFWSDRGMGYALSGGGDERRV HHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHH RELAIEACGALGGPVGAWSG HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA