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The map label for this gene is omp32 [H]

Identifier: 161525279

GI number: 161525279

Start: 2319151

End: 2320239

Strand: Reverse

Name: omp32 [H]

Synonym: Bmul_2109

Alternate gene names: 161525279

Gene position: 2320239-2319151 (Counterclockwise)

Preceding gene: 161525280

Following gene: 161525278

Centisome position: 67.28

GC content: 69.42

Gene sequence:

>1089_bases
ATGAAAACCTTCCGCACGGCCGCGACGGCCGTCTCGTTCGCCGCAGCCGCGGTGTCGCCGGGCGCGCATGCGCAAAGCAG
CGTCACGCTGTACGGCATCGTCGACACCGGCGTGCAGTACTACAACAACGCGGCGGGCGGCGGGTCGGTCGCCGGCATGC
CGACGCTGACCGGTGAGGTGCCGTCGCGCTTCGGCCTGCGCGGCGTCGAGGATCTCGGCGGCGGCTATCGCACCTTCTTC
GTGCTCGAAAACGGCTTCGCGATGAATTCGGGTGCGCTCAACTACGGCGGCCGGCTGTTCGGACGGCAGGCCAACCTCGG
CATCGAATCGCCGTACGGCACGCTGACGCTCGGGCGGCAGATGAACATGTCGATGCTCGTGCTGCTCAATGCCGACGTGA
TCGGCCCGTCGATCCATTCGATGGCGAGCTTCGACAGCTATCTGCCGAACGCGCGCAGCGACAACGCGCTCGGCTATCTC
GGCCGCTTCGGCGGCCTGACGCTCGGCGGCACCTACAGCACGGGCCGCGACGGCGCGGGGCCGGCCGGCCCGTCGGCCAC
GAACTGCGCGGGCAACGTGCCGGGCGATCCGGTCGCGTGCCGGCAGTACACGATGATGGTCGCGTACGACGCGCCGCAGT
TCGGCGCGGCCGCCTCGTACGACGTGATGCACGGCGGGACCGGCGCGTCGGCGCCGTTGTCGAGCCCCGGCTATACCGAC
ACGCGCACGATCGTCGACGCGTACGTGAAATTCGGCATCGCGAAACTCGGCGCGGGCTGGATTCGCCGCAACACGGCAGC
CGCGGTCCACAGCCAGTCGGATCTGTTCTTCGCGGGCGGCACGCTCTACGCGACGCCGGCGCTATCATTCGACGCGCAGG
CCCTGCGCTATCTGCTGCGCGGCCGCTTCGACTCGAACCTGTTCGTGGCGCGCGCGAACTACAGCCTGTCGAAGCGGACG
ATGGTCTATGCGTCGGCCGGCTACATGATGAACAGCGCGCTCGGCACGTCGGCGGTGGCGGCCGGCGGCACGGTCGGCGC
CGGCCAGAACCAGGTCGGCGTGATGGCCGGCATTCAGCAGCGCTTCTAG

Upstream 100 bases:

>100_bases
ACACGCCGCTCGCGACCTGAACGGGCGCCGCGCGTTTTCCCCACCGGCCGGCATCGCCGGCCTTCATAAGCACAACGACA
CGACAGGTCTGGAGACTTCG

Downstream 100 bases:

>100_bases
CCGGCCGCGCGCACCACGGAGACCCGACGATGACGATCGACCTTCTCAGCGACGTGCTGACCGACCTGCGGGCCGATGCG
GTCGTCACGGGGCGCTTCAC

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKTFRTAATAVSFAAAAVSPGAHAQSSVTLYGIVDTGVQYYNNAAGGGSVAGMPTLTGEVPSRFGLRGVEDLGGGYRTFF
VLENGFAMNSGALNYGGRLFGRQANLGIESPYGTLTLGRQMNMSMLVLLNADVIGPSIHSMASFDSYLPNARSDNALGYL
GRFGGLTLGGTYSTGRDGAGPAGPSATNCAGNVPGDPVACRQYTMMVAYDAPQFGAAASYDVMHGGTGASAPLSSPGYTD
TRTIVDAYVKFGIAKLGAGWIRRNTAAAVHSQSDLFFAGGTLYATPALSFDAQALRYLLRGRFDSNLFVARANYSLSKRT
MVYASAGYMMNSALGTSAVAAGGTVGAGQNQVGVMAGIQQRF

Sequences:

>Translated_362_residues
MKTFRTAATAVSFAAAAVSPGAHAQSSVTLYGIVDTGVQYYNNAAGGGSVAGMPTLTGEVPSRFGLRGVEDLGGGYRTFF
VLENGFAMNSGALNYGGRLFGRQANLGIESPYGTLTLGRQMNMSMLVLLNADVIGPSIHSMASFDSYLPNARSDNALGYL
GRFGGLTLGGTYSTGRDGAGPAGPSATNCAGNVPGDPVACRQYTMMVAYDAPQFGAAASYDVMHGGTGASAPLSSPGYTD
TRTIVDAYVKFGIAKLGAGWIRRNTAAAVHSQSDLFFAGGTLYATPALSFDAQALRYLLRGRFDSNLFVARANYSLSKRT
MVYASAGYMMNSALGTSAVAAGGTVGAGQNQVGVMAGIQQRF
>Mature_362_residues
MKTFRTAATAVSFAAAAVSPGAHAQSSVTLYGIVDTGVQYYNNAAGGGSVAGMPTLTGEVPSRFGLRGVEDLGGGYRTFF
VLENGFAMNSGALNYGGRLFGRQANLGIESPYGTLTLGRQMNMSMLVLLNADVIGPSIHSMASFDSYLPNARSDNALGYL
GRFGGLTLGGTYSTGRDGAGPAGPSATNCAGNVPGDPVACRQYTMMVAYDAPQFGAAASYDVMHGGTGASAPLSSPGYTD
TRTIVDAYVKFGIAKLGAGWIRRNTAAAVHSQSDLFFAGGTLYATPALSFDAQALRYLLRGRFDSNLFVARANYSLSKRT
MVYASAGYMMNSALGTSAVAAGGTVGAGQNQVGVMAGIQQRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37338; Mature: 37338

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFRTAATAVSFAAAAVSPGAHAQSSVTLYGIVDTGVQYYNNAAGGGSVAGMPTLTGEV
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCC
PSRFGLRGVEDLGGGYRTFFVLENGFAMNSGALNYGGRLFGRQANLGIESPYGTLTLGRQ
CHHCCCCCHHHCCCCEEEEEEEECCEEECCCCCCCCCEEECCCCCCCCCCCCCEEEECCC
MNMSMLVLLNADVIGPSIHSMASFDSYLPNARSDNALGYLGRFGGLTLGGTYSTGRDGAG
CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCC
PAGPSATNCAGNVPGDPVACRQYTMMVAYDAPQFGAAASYDVMHGGTGASAPLSSPGYTD
CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCH
TRTIVDAYVKFGIAKLGAGWIRRNTAAAVHSQSDLFFAGGTLYATPALSFDAQALRYLLR
HHHHHHHHHHHHHHHHCCHHHHCCCHHEEECCCCEEEECCEEEECCCCCCCHHHHHHHHH
GRFDSNLFVARANYSLSKRTMVYASAGYMMNSALGTSAVAAGGTVGAGQNQVGVMAGIQQ
CCCCCCEEEEECCCCCCCEEEEEEECCHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHH
RF
CC
>Mature Secondary Structure
MKTFRTAATAVSFAAAAVSPGAHAQSSVTLYGIVDTGVQYYNNAAGGGSVAGMPTLTGEV
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCC
PSRFGLRGVEDLGGGYRTFFVLENGFAMNSGALNYGGRLFGRQANLGIESPYGTLTLGRQ
CHHCCCCCHHHCCCCEEEEEEEECCEEECCCCCCCCCEEECCCCCCCCCCCCCEEEECCC
MNMSMLVLLNADVIGPSIHSMASFDSYLPNARSDNALGYLGRFGGLTLGGTYSTGRDGAG
CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCC
PAGPSATNCAGNVPGDPVACRQYTMMVAYDAPQFGAAASYDVMHGGTGASAPLSSPGYTD
CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCH
TRTIVDAYVKFGIAKLGAGWIRRNTAAAVHSQSDLFFAGGTLYATPALSFDAQALRYLLR
HHHHHHHHHHHHHHHHCCHHHHCCCHHEEECCCCEEEECCEEEECCCCCCCHHHHHHHHH
GRFDSNLFVARANYSLSKRTMVYASAGYMMNSALGTSAVAAGGTVGAGQNQVGVMAGIQQ
CCCCCCEEEEECCCCCCCEEEEEEECCHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHH
RF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]