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The map label for this gene is ycaC [H]

Identifier: 161525146

GI number: 161525146

Start: 2174088

End: 2174768

Strand: Direct

Name: ycaC [H]

Synonym: Bmul_1974

Alternate gene names: 161525146

Gene position: 2174088-2174768 (Clockwise)

Preceding gene: 161525140

Following gene: 161525147

Centisome position: 63.05

GC content: 60.79

Gene sequence:

>681_bases
ATGAGCGCACCCGCAAACTTCAATGGCCAAGCGCCGTTCATCGACCCGAACGATACCGCCATGCTGCTGATCGATCACCA
GAGCGGCCTGTTCCAGGTGGTCAAGGACATGGAGATGACCGTCCTGCGCAAGCACGCGACTGCGCTGGCCAAGATGGCGA
CGCTCTGCAAGATGCCGGTGATCACGACCGCATCGGTGCCGCAAGGCCCGAATGGTCCGTTGATTCCGGAAATCCACGAG
AGCGCGCCGCATGCGCAATACGTCGCACGCACGGGACAGATCAACGCCTGGGACAATCCCGACTTCGTCGCGGCGGTCAA
GGCAACGGGACGCAAGACGCTGATCATCGCCGGCACCGTCACCAGCGTCTGCATGGCCTTTCCTGCCATCTCGGCCGTCC
AGGAAGGCTACAAGGTCTTCGCGGTGATCGATGCGTCCGGCACGTACTCGAAAATGGCGCAGGAGATTACGCTCGCCCGC
ATCGTTCAAGCCGGTGTGGTGCCGGTCGACACGGCGGCAGTTGCGTCCGAACTGCAGAAGACCTGGCATCGTCCCGATGC
ACAGCAATGGGCGCATATCTACGAGCTGGTTTTCCCTCCGTACCAGCTGCTGATCGAGAGCTACGCCAAGGCGCAGGATG
TTCTGAAGAATAACGAGCAACTCGATTCGGAACGGTCGTAA

Upstream 100 bases:

>100_bases
CGAACCGCCTGCACGATGCGTCGCCGTGTGAGCCCGCGCAACCACCGGTCTTTCCAGCGCCGTTTGGCGCCGCGAAGGGC
CGCACTTCAGGAGTATTCCC

Downstream 100 bases:

>100_bases
TGCGCGCTGCGGTGCCGGTACGCCGATGCTGGCACCGCCTGCCGAATGTCGCTTTTCTGCGCTGTGCCGACGCTTCTCGA
ATACCTGGCGAGGCATTCGC

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSAPANFNGQAPFIDPNDTAMLLIDHQSGLFQVVKDMEMTVLRKHATALAKMATLCKMPVITTASVPQGPNGPLIPEIHE
SAPHAQYVARTGQINAWDNPDFVAAVKATGRKTLIIAGTVTSVCMAFPAISAVQEGYKVFAVIDASGTYSKMAQEITLAR
IVQAGVVPVDTAAVASELQKTWHRPDAQQWAHIYELVFPPYQLLIESYAKAQDVLKNNEQLDSERS

Sequences:

>Translated_226_residues
MSAPANFNGQAPFIDPNDTAMLLIDHQSGLFQVVKDMEMTVLRKHATALAKMATLCKMPVITTASVPQGPNGPLIPEIHE
SAPHAQYVARTGQINAWDNPDFVAAVKATGRKTLIIAGTVTSVCMAFPAISAVQEGYKVFAVIDASGTYSKMAQEITLAR
IVQAGVVPVDTAAVASELQKTWHRPDAQQWAHIYELVFPPYQLLIESYAKAQDVLKNNEQLDSERS
>Mature_225_residues
SAPANFNGQAPFIDPNDTAMLLIDHQSGLFQVVKDMEMTVLRKHATALAKMATLCKMPVITTASVPQGPNGPLIPEIHES
APHAQYVARTGQINAWDNPDFVAAVKATGRKTLIIAGTVTSVCMAFPAISAVQEGYKVFAVIDASGTYSKMAQEITLARI
VQAGVVPVDTAAVASELQKTWHRPDAQQWAHIYELVFPPYQLLIESYAKAQDVLKNNEQLDSERS

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=195, Percent_Identity=47.1794871794872, Blast_Score=190, Evalue=7e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24531; Mature: 24400

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPANFNGQAPFIDPNDTAMLLIDHQSGLFQVVKDMEMTVLRKHATALAKMATLCKMPV
CCCCCCCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ITTASVPQGPNGPLIPEIHESAPHAQYVARTGQINAWDNPDFVAAVKATGRKTLIIAGTV
EEECCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECHH
TSVCMAFPAISAVQEGYKVFAVIDASGTYSKMAQEITLARIVQAGVVPVDTAAVASELQK
HHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
TWHRPDAQQWAHIYELVFPPYQLLIESYAKAQDVLKNNEQLDSERS
HHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCC
>Mature Secondary Structure 
SAPANFNGQAPFIDPNDTAMLLIDHQSGLFQVVKDMEMTVLRKHATALAKMATLCKMPV
CCCCCCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ITTASVPQGPNGPLIPEIHESAPHAQYVARTGQINAWDNPDFVAAVKATGRKTLIIAGTV
EEECCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECHH
TSVCMAFPAISAVQEGYKVFAVIDASGTYSKMAQEITLARIVQAGVVPVDTAAVASELQK
HHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
TWHRPDAQQWAHIYELVFPPYQLLIESYAKAQDVLKNNEQLDSERS
HHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]