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The map label for this gene is oruR [H]

Identifier: 161525140

GI number: 161525140

Start: 2167794

End: 2168840

Strand: Direct

Name: oruR [H]

Synonym: Bmul_1968

Alternate gene names: 161525140

Gene position: 2167794-2168840 (Clockwise)

Preceding gene: 161525110

Following gene: 161525146

Centisome position: 62.86

GC content: 69.44

Gene sequence:

>1047_bases
GTGCGCCCTACCGTCCATCGCCTGCCTGGTCGCTACTACGCGCGCCTTGCGCGGATCGTCGCCGAACACATGCGCGACCC
GAGCGAATTCATCGCGCGCTGCGGGTTCGACCCGCGTACGCTGCACGATCCGGCCGCGACGCTCACGCTCGCGCAGCTCG
ACCGGCTGATCGAAACGGCAAGCGCGGTCAGCGGCTGCGCGCACCTCGGGCTCGATGCCGGGCGCTACGCGCGGCTCACG
TCGCACGGCCCGCTCGGCTATGCGCTGCTCAGCTGCAGCACGCTCGAGGAACTCGTGCGGCTCGCCGCGCGCTACTACCA
TCTGATCGTGCCGGTCGTCACGATGCGCTATGTGCACCGCGGCCGGTTCGCGGAAATCACTTACACGCCGACCGTCGCGA
TGCAGGCGCGCACGCTGCGCTTTTTCGTCGAGGCGCTCGCGGTCGCGTTTCAGGTGCAGATCGACGGCATCGTCGGCGCG
GAGACCGACGACTACGAAATCCGTCTGTCGACGGAGGCGCCCGCCGACGTCCACCGCTATCTCGGGCGCCGCCTCGCGCG
CTATCGGTTCGGCGCGCGCAGCACGCCGGGCGTCACGGTCGTGATCGCCGCGTCGCTGCTCGAGCGGCCGCTGCCGATGG
CGAACGCGCTGTCGAAACGCGTGGCGGAAGCGCAGTGCGAAGCGCGCACGCGCGCGCGTGCGGACGCAAGCGACGTCGTG
GAACTGATCGAGATGATGCTGACGCAGAGCGCGGATTTCCGGCTCTCGAGGGAGGAGGTCGCGGCCGCGATGAACGTCAC
CGTGCGTACGCTGAACCGCTATCTGAGCAGCCAGGGACACACGTTTCGCGACGTATGCCAGCGCACGCGGTTCGCGCATG
CGTGCCGACTGCTCGACGAAGGCCGGCTGACGGTGACGCAGATCGCGGCGAAGGTCGGCTTCAGCGACGTCGCGAACTTC
AGCCGCGGGTTTCGCGAGTACATCGGCGTATCGCCGACGCGCTACACGGCGCTGTCCGCGCGCGCGTCGGCGAGAGACGC
GGCGTGA

Upstream 100 bases:

>100_bases
CTATGATGGTCAACCCCGGTTGTTCTGCCGTTGTCGAAATGGGACACTGCGTTATCGAATCGGGACAGCGCATCGCGCGC
CCGGATAGCGGAGACATGTC

Downstream 100 bases:

>100_bases
CGCCGCGCATGGCGTTCAGGCCGCCGCGCGTGCGGCCGCCGCCTCGGGCCACGGGCGCCGCACCGTGTCCATCTGTTCCC
AGCAGCGCGCGAGCTGCAGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MRPTVHRLPGRYYARLARIVAEHMRDPSEFIARCGFDPRTLHDPAATLTLAQLDRLIETASAVSGCAHLGLDAGRYARLT
SHGPLGYALLSCSTLEELVRLAARYYHLIVPVVTMRYVHRGRFAEITYTPTVAMQARTLRFFVEALAVAFQVQIDGIVGA
ETDDYEIRLSTEAPADVHRYLGRRLARYRFGARSTPGVTVVIAASLLERPLPMANALSKRVAEAQCEARTRARADASDVV
ELIEMMLTQSADFRLSREEVAAAMNVTVRTLNRYLSSQGHTFRDVCQRTRFAHACRLLDEGRLTVTQIAAKVGFSDVANF
SRGFREYIGVSPTRYTALSARASARDAA

Sequences:

>Translated_348_residues
MRPTVHRLPGRYYARLARIVAEHMRDPSEFIARCGFDPRTLHDPAATLTLAQLDRLIETASAVSGCAHLGLDAGRYARLT
SHGPLGYALLSCSTLEELVRLAARYYHLIVPVVTMRYVHRGRFAEITYTPTVAMQARTLRFFVEALAVAFQVQIDGIVGA
ETDDYEIRLSTEAPADVHRYLGRRLARYRFGARSTPGVTVVIAASLLERPLPMANALSKRVAEAQCEARTRARADASDVV
ELIEMMLTQSADFRLSREEVAAAMNVTVRTLNRYLSSQGHTFRDVCQRTRFAHACRLLDEGRLTVTQIAAKVGFSDVANF
SRGFREYIGVSPTRYTALSARASARDAA
>Mature_348_residues
MRPTVHRLPGRYYARLARIVAEHMRDPSEFIARCGFDPRTLHDPAATLTLAQLDRLIETASAVSGCAHLGLDAGRYARLT
SHGPLGYALLSCSTLEELVRLAARYYHLIVPVVTMRYVHRGRFAEITYTPTVAMQARTLRFFVEALAVAFQVQIDGIVGA
ETDDYEIRLSTEAPADVHRYLGRRLARYRFGARSTPGVTVVIAASLLERPLPMANALSKRVAEAQCEARTRARADASDVV
ELIEMMLTQSADFRLSREEVAAAMNVTVRTLNRYLSSQGHTFRDVCQRTRFAHACRLLDEGRLTVTQIAAKVGFSDVANF
SRGFREYIGVSPTRYTALSARASARDAA

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38668; Mature: 38668

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTVHRLPGRYYARLARIVAEHMRDPSEFIARCGFDPRTLHDPAATLTLAQLDRLIETA
CCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
SAVSGCAHLGLDAGRYARLTSHGPLGYALLSCSTLEELVRLAARYYHLIVPVVTMRYVHR
HHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRFAEITYTPTVAMQARTLRFFVEALAVAFQVQIDGIVGAETDDYEIRLSTEAPADVHRY
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCEECCCCCCEEEEECCCCCHHHHHH
LGRRLARYRFGARSTPGVTVVIAASLLERPLPMANALSKRVAEAQCEARTRARADASDVV
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ELIEMMLTQSADFRLSREEVAAAMNVTVRTLNRYLSSQGHTFRDVCQRTRFAHACRLLDE
HHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GRLTVTQIAAKVGFSDVANFSRGFREYIGVSPTRYTALSARASARDAA
CCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRPTVHRLPGRYYARLARIVAEHMRDPSEFIARCGFDPRTLHDPAATLTLAQLDRLIETA
CCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
SAVSGCAHLGLDAGRYARLTSHGPLGYALLSCSTLEELVRLAARYYHLIVPVVTMRYVHR
HHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRFAEITYTPTVAMQARTLRFFVEALAVAFQVQIDGIVGAETDDYEIRLSTEAPADVHRY
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCEECCCCCCEEEEECCCCCHHHHHH
LGRRLARYRFGARSTPGVTVVIAASLLERPLPMANALSKRVAEAQCEARTRARADASDVV
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ELIEMMLTQSADFRLSREEVAAAMNVTVRTLNRYLSSQGHTFRDVCQRTRFAHACRLLDE
HHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GRLTVTQIAAKVGFSDVANFSRGFREYIGVSPTRYTALSARASARDAA
CCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]