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The map label for this gene is ydhJ [H]

Identifier: 161525041

GI number: 161525041

Start: 2039079

End: 2039957

Strand: Direct

Name: ydhJ [H]

Synonym: Bmul_1869

Alternate gene names: 161525041

Gene position: 2039079-2039957 (Clockwise)

Preceding gene: 161525040

Following gene: 161525043

Centisome position: 59.13

GC content: 66.67

Gene sequence:

>879_bases
ATGATGCTCAGAAAACTCTTCGGCTTCGTCGCGACGGCCGTCATCCTTCTCGTCGCGATCCTGATCGGGCGCTCGCTGTG
GGTGCACTACATGGAAGATCCGTGGACGCGCGACGGGCGCGTGCGCGCGGAAATCGTCAATGTCGCGCCGGACGTGTCGG
GCGCGATCGTCGAGCTGCCCGTGCATGACAACCAGCTCGTCAAGAAGGGCGACCTGATCATGCAGATCGACCCGTCGCAC
TATCAGATCGCGGTCGAACAGGCGCAGGCGGCCGTCGCCGCCCGCCGCGCGGAACTGCAGATGCGCCGCGACGACGCGGC
CCGCCGCGCCGATCTCGACGCGCTCGTCGTGTCGAAGGAAAACCGCGAGAACGCGGCGCACAGCGCGTCGAGCGCCGAGG
CGCAGTACCAGCAGGCACTCGCCGCGCTCGACGCCGCGAAGCTGAATCTCGAGCGCACGCGCGTCGTCGCGCCGGTCGAC
GGCTACATCACGAACCTGCAGACCTTCAAGGGCAACTACGCGGTCGCCGGTCAGGCGAAGCTCGCGATCGTCGACAGCCA
TTCGTTCTGGGTCTACGGCTACTTCGAGGAAACCAAGCTGCCGCGCGTGAAGGTCGGCGCGCCGGCCGAGATGCGGCTGA
TGAGCGGCGGCGTGATGAAAGGCCACGTCGAGAGCATCTCGCGCGGCATCTACGATCGCGACAACCCGCAAAGCCGCGAC
CTCGTCGCCGACGTGAATCCGACCTTCAACTGGGTGCGCCTCGCGCAGCGCGTGCCGGTACGCATCAAGATCGACGAGGT
GCCGGACGGCGTGCTGCTGTCGGCCGGCACGACCTGCACGGTCATCATCGATCCCGACCGCAAGAAGCAGTCGTCGTAA

Upstream 100 bases:

>100_bases
CTACCGTCTCGTCTGGCACCCGTCGCTGTTCCGGGCCTGCCTGCTCGTCTGCATATGCGGCGGACTCAGTCTCGCCGTTT
ACCGTTGATCCACCACCACC

Downstream 100 bases:

>100_bases
CGGGCGGCGGCCGGAGCGCGCCGGCCCCGATGCCGGCGCGGTGCGAGTGGTACACGCGTGGCCCGCGCGTCGCACGCGGC
GCGCGCTCAGTCCGCCGCGA

Product: secretion protein HlyD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MMLRKLFGFVATAVILLVAILIGRSLWVHYMEDPWTRDGRVRAEIVNVAPDVSGAIVELPVHDNQLVKKGDLIMQIDPSH
YQIAVEQAQAAVAARRAELQMRRDDAARRADLDALVVSKENRENAAHSASSAEAQYQQALAALDAAKLNLERTRVVAPVD
GYITNLQTFKGNYAVAGQAKLAIVDSHSFWVYGYFEETKLPRVKVGAPAEMRLMSGGVMKGHVESISRGIYDRDNPQSRD
LVADVNPTFNWVRLAQRVPVRIKIDEVPDGVLLSAGTTCTVIIDPDRKKQSS

Sequences:

>Translated_292_residues
MMLRKLFGFVATAVILLVAILIGRSLWVHYMEDPWTRDGRVRAEIVNVAPDVSGAIVELPVHDNQLVKKGDLIMQIDPSH
YQIAVEQAQAAVAARRAELQMRRDDAARRADLDALVVSKENRENAAHSASSAEAQYQQALAALDAAKLNLERTRVVAPVD
GYITNLQTFKGNYAVAGQAKLAIVDSHSFWVYGYFEETKLPRVKVGAPAEMRLMSGGVMKGHVESISRGIYDRDNPQSRD
LVADVNPTFNWVRLAQRVPVRIKIDEVPDGVLLSAGTTCTVIIDPDRKKQSS
>Mature_292_residues
MMLRKLFGFVATAVILLVAILIGRSLWVHYMEDPWTRDGRVRAEIVNVAPDVSGAIVELPVHDNQLVKKGDLIMQIDPSH
YQIAVEQAQAAVAARRAELQMRRDDAARRADLDALVVSKENRENAAHSASSAEAQYQQALAALDAAKLNLERTRVVAPVD
GYITNLQTFKGNYAVAGQAKLAIVDSHSFWVYGYFEETKLPRVKVGAPAEMRLMSGGVMKGHVESISRGIYDRDNPQSRD
LVADVNPTFNWVRLAQRVPVRIKIDEVPDGVLLSAGTTCTVIIDPDRKKQSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=283, Percent_Identity=45.2296819787986, Blast_Score=251, Evalue=4e-68,
Organism=Escherichia coli, GI1789637, Length=292, Percent_Identity=40.4109589041096, Blast_Score=217, Evalue=7e-58,
Organism=Escherichia coli, GI1790519, Length=307, Percent_Identity=30.6188925081433, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1788711, Length=335, Percent_Identity=26.5671641791045, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789041, Length=301, Percent_Identity=24.2524916943522, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI87082036, Length=173, Percent_Identity=30.635838150289, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790012, Length=277, Percent_Identity=24.5487364620939, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87081796, Length=182, Percent_Identity=29.1208791208791, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 32255; Mature: 32255

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLRKLFGFVATAVILLVAILIGRSLWVHYMEDPWTRDGRVRAEIVNVAPDVSGAIVELP
CHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEE
VHDNQLVKKGDLIMQIDPSHYQIAVEQAQAAVAARRAELQMRRDDAARRADLDALVVSKE
CCCCCCEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
NRENAAHSASSAEAQYQQALAALDAAKLNLERTRVVAPVDGYITNLQTFKGNYAVAGQAK
CCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHEEECCCEEEECCEE
LAIVDSHSFWVYGYFEETKLPRVKVGAPAEMRLMSGGVMKGHVESISRGIYDRDNPQSRD
EEEEECCCEEEEEEEECCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
LVADVNPTFNWVRLAQRVPVRIKIDEVPDGVLLSAGTTCTVIIDPDRKKQSS
EEEECCCCHHHHHHHHHCCEEEEEECCCCCEEEECCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MMLRKLFGFVATAVILLVAILIGRSLWVHYMEDPWTRDGRVRAEIVNVAPDVSGAIVELP
CHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEE
VHDNQLVKKGDLIMQIDPSHYQIAVEQAQAAVAARRAELQMRRDDAARRADLDALVVSKE
CCCCCCEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
NRENAAHSASSAEAQYQQALAALDAAKLNLERTRVVAPVDGYITNLQTFKGNYAVAGQAK
CCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHEEECCCEEEECCEE
LAIVDSHSFWVYGYFEETKLPRVKVGAPAEMRLMSGGVMKGHVESISRGIYDRDNPQSRD
EEEEECCCEEEEEEEECCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
LVADVNPTFNWVRLAQRVPVRIKIDEVPDGVLLSAGTTCTVIIDPDRKKQSS
EEEECCCCHHHHHHHHHCCEEEEEECCCCCEEEECCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]