Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010084 |
Length | 3,448,466 |
Click here to switch to the map view.
The map label for this gene is mdtP [H]
Identifier: 161524923
GI number: 161524923
Start: 1935719
End: 1937215
Strand: Direct
Name: mdtP [H]
Synonym: Bmul_1750
Alternate gene names: 161524923
Gene position: 1935719-1937215 (Clockwise)
Preceding gene: 161524922
Following gene: 161524924
Centisome position: 56.13
GC content: 68.94
Gene sequence:
>1497_bases ATGAAATCCTCCCCGTTGTCCGTGCGTGCCGGGTCGCGCCGCACCGCCGTTGCCGTTGCGGTCGCCGCACTGGCACTGGC GGGCTGCGCGAACTACATCGGCATCAAGAGCGACAAGCAGATCGCCCCCGCGTCGCAGTTCGAAACCGCGCAGAGCCTTC CGGCCCAGGGCGGCCACTGGCCGTCGCTCGACTGGGCGAGCCAGTTCGGCGATCCGCAGCTGCCGAAGCTGATCGACGAG GCGCTCGCCGGCAATCCGTCGATCGCGCAGGCGCAGGCGCGCATCGCGAAGGCGTCGTCGTATATCGAATCGTCGCGCTC GAACCTGCTGCCGAAGGCCGAAGCGAGCTACTCGTGGACGCGCGAGCTCTATTCGGCGAACGGCCTCTTCCCGCCGCCGT ACGGCGGCCAGTGGTACAGCGAGAACAACGTGCTCGCCAGCGCATCGTGGGAGCTCGACCTGTGGGGCAAGAACCGCGAG CGCCTGCGCACGGCCGTGTCGCAGGAAAAGGCCGCGGAAGCCGACATGCAGCAGGCGCGCATCACGCTCGCCTCGTCGGT CGCGCGCACCTACAACTCGCTCGCGCAGCTGTACGCGCTGCGCGACATCGCGCAGCGCGAGATCGCCAACCGCGAGTCGG TCGGCAAGATCACCGACGGCCGCGTGTCGGCCGGCCTCGACACGAACGTCGAACGCCAGACCGCACGCGGCAACATCGCG ACGACGCAGGCGTCGCTGTCCGATCTCGACGGTCAGATCACGACCGTGCGCTACCAGCTCGCCGCACTGCTCGGCAAAGG GCCGGACCGCGGGCTGCAGATCGCCGCGCCGGTGCTGAACCCGGCCGGCGACGTCGCGCTACCCGACAACCTGCCCGCCG ACCTCGTATCGCGCCGCCCCGACATCGTCGCCGCGCGCTGGCAGGTCGAAGCGGCAATGCACGACGTGAAGGAAGCGAAG GCCGAGTTCTTCCCGGACGTGAACCTCGCGGCCGGTTTCGGTTTCGATGCGTTCGGCTGGGGCAAATTCCTGAACTTCAC GAGCCGCCAGGCGCAGTTCGGCCCGGCGATCCATCTGCCGATCTTCGACGCCGGCGCGCTGCGCGCGCAGCTCAAGGGCC GCTACGCGGACTTCGATCTGTCGGTCGCGAACTACAACCAGACGCTGATCAGCGCGCTGAACGACGTGGCGACGCAAGTT GCCGCGATCCGTGCGATCGATCGCCAGATGGGCGACGCGCAGCGCGCGCTCGACGCGTCGACGCGCGCATACGATCTCGC GGTGATTCGCTACAAGGCCGGCCTGTCGCCGCAGCTGCAGGTGCTGACCGCGGACAGCAACCGGCTCGCCTCGGAGCAGA CCGTGACGAATCTGAAGATGCGCCGTCGCGACATGCAGCTCGCGCTGATCAAGGCGCTCGGCGGCGGCTTCGATGCGACC GGCACCGCGCTCGCGGCGCCCGAGACCGCGAAACAGACCCGACAGGCCGCCAACTGA
Upstream 100 bases:
>100_bases CAGCGTCGCGCAATAGTTGCCATAACAATTACTTTTGACAGATTAATGTAAGGAAATCCTTGCAGTGTCCATCATTCATT CCGAGTCAGGGATCAGCGCG
Downstream 100 bases:
>100_bases TCCGGCGCCGCCCTACCAAGACACTCGAAATAACGGACGGAGAAAATCGCCATGAGCGACCCTCAACAAAACGCCGCCAG CGCCCAGCCGCAGAACAACG
Product: RND efflux system outer membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MKSSPLSVRAGSRRTAVAVAVAALALAGCANYIGIKSDKQIAPASQFETAQSLPAQGGHWPSLDWASQFGDPQLPKLIDE ALAGNPSIAQAQARIAKASSYIESSRSNLLPKAEASYSWTRELYSANGLFPPPYGGQWYSENNVLASASWELDLWGKNRE RLRTAVSQEKAAEADMQQARITLASSVARTYNSLAQLYALRDIAQREIANRESVGKITDGRVSAGLDTNVERQTARGNIA TTQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVLNPAGDVALPDNLPADLVSRRPDIVAARWQVEAAMHDVKEAK AEFFPDVNLAAGFGFDAFGWGKFLNFTSRQAQFGPAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQV AAIRAIDRQMGDAQRALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDMQLALIKALGGGFDAT GTALAAPETAKQTRQAAN
Sequences:
>Translated_498_residues MKSSPLSVRAGSRRTAVAVAVAALALAGCANYIGIKSDKQIAPASQFETAQSLPAQGGHWPSLDWASQFGDPQLPKLIDE ALAGNPSIAQAQARIAKASSYIESSRSNLLPKAEASYSWTRELYSANGLFPPPYGGQWYSENNVLASASWELDLWGKNRE RLRTAVSQEKAAEADMQQARITLASSVARTYNSLAQLYALRDIAQREIANRESVGKITDGRVSAGLDTNVERQTARGNIA TTQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVLNPAGDVALPDNLPADLVSRRPDIVAARWQVEAAMHDVKEAK AEFFPDVNLAAGFGFDAFGWGKFLNFTSRQAQFGPAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQV AAIRAIDRQMGDAQRALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDMQLALIKALGGGFDAT GTALAAPETAKQTRQAAN >Mature_498_residues MKSSPLSVRAGSRRTAVAVAVAALALAGCANYIGIKSDKQIAPASQFETAQSLPAQGGHWPSLDWASQFGDPQLPKLIDE ALAGNPSIAQAQARIAKASSYIESSRSNLLPKAEASYSWTRELYSANGLFPPPYGGQWYSENNVLASASWELDLWGKNRE RLRTAVSQEKAAEADMQQARITLASSVARTYNSLAQLYALRDIAQREIANRESVGKITDGRVSAGLDTNVERQTARGNIA TTQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVLNPAGDVALPDNLPADLVSRRPDIVAARWQVEAAMHDVKEAK AEFFPDVNLAAGFGFDAFGWGKFLNFTSRQAQFGPAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQV AAIRAIDRQMGDAQRALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDMQLALIKALGGGFDAT GTALAAPETAKQTRQAAN
Specific function: Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride [H]
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=482, Percent_Identity=31.1203319502075, Blast_Score=202, Evalue=4e-53, Organism=Escherichia coli, GI1786785, Length=465, Percent_Identity=27.3118279569892, Blast_Score=130, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 53474; Mature: 53474
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSPLSVRAGSRRTAVAVAVAALALAGCANYIGIKSDKQIAPASQFETAQSLPAQGGHW CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC PSLDWASQFGDPQLPKLIDEALAGNPSIAQAQARIAKASSYIESSRSNLLPKAEASYSWT CCCCHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RELYSANGLFPPPYGGQWYSENNVLASASWELDLWGKNRERLRTAVSQEKAAEADMQQAR HHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH ITLASSVARTYNSLAQLYALRDIAQREIANRESVGKITDGRVSAGLDTNVERQTARGNIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEECCCCCCCHHHHCCCCCE TTQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVLNPAGDVALPDNLPADLVSRRP ECHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCC DIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGKFLNFTSRQAQFGPAIHLP CEEEEHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEE IFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVAAIRAIDRQMGDAQRALDAS ECCCHHHHHHHCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDMQLALIKALGGGFDAT CCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GTALAAPETAKQTRQAAN CCEECCCHHHHHHHHCCC >Mature Secondary Structure MKSSPLSVRAGSRRTAVAVAVAALALAGCANYIGIKSDKQIAPASQFETAQSLPAQGGHW CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC PSLDWASQFGDPQLPKLIDEALAGNPSIAQAQARIAKASSYIESSRSNLLPKAEASYSWT CCCCHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RELYSANGLFPPPYGGQWYSENNVLASASWELDLWGKNRERLRTAVSQEKAAEADMQQAR HHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH ITLASSVARTYNSLAQLYALRDIAQREIANRESVGKITDGRVSAGLDTNVERQTARGNIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEECCCCCCCHHHHCCCCCE TTQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVLNPAGDVALPDNLPADLVSRRP ECHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCC DIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGKFLNFTSRQAQFGPAIHLP CEEEEHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEE IFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVAAIRAIDRQMGDAQRALDAS ECCCHHHHHHHCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDMQLALIKALGGGFDAT CCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GTALAAPETAKQTRQAAN CCEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]