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The map label for this gene is rodZ [H]

Identifier: 161524635

GI number: 161524635

Start: 1607576

End: 1608580

Strand: Direct

Name: rodZ [H]

Synonym: Bmul_1462

Alternate gene names: 161524635

Gene position: 1607576-1608580 (Clockwise)

Preceding gene: 161524634

Following gene: 161524636

Centisome position: 46.62

GC content: 71.54

Gene sequence:

>1005_bases
ATGAGTGAGCCGCAGCCGTCAAACGGCGCAGAGACGAATGCCGCACAGCCGGCACCGGCGGGACTGGAATCGCTGGTCGC
GGTCGGCAGCCGGCTGGCGCAGCTTCGGGAGGCGAAGGGGTGGACGGTCGAGGACGTATCGGCGCGGCTCAAGGTCGCGC
CGCCGAAGCTGCGGGCGCTGGAGGCCGGCGACATCAGCCATCTGCCCGGCGTGACGTTCGCACTGGGCGTCGTACGCAGC
TACGCGAAGATGCTCGGCGTCGATCCGGAACCGTTTGCGCAGGCGCTGCGCCGCGAGCGCGGTGTGCCGGAGGTCGATCT
GTCGATGCCCGCGTCGTCGGGCGCCGATCTGCCGCGCGGCCGCGTGTCGATTCCGCTCGGACACTCGTCGCGGCACCATC
CGTGGCTATGGGGAACGGCGCTCGTCGTGGTCGCGGTGATCGCGGTGCTCATGTGGCACACTGGCGGCGATTCGTCGGGC
TGGCTCGCGCGCCTGAAGGGTAACGACGCGCAGCAGCACGCCTCGGCCGCAGCGACGGCCTCGCCGGTCGAGGAAGCGTC
GGCGGGCGGCGCATCGAACGCGGCGCCCGTTGCCGCCGTGCCGGCTGCCGTATCGGAAGCCGCGCCGCAGGCTGCCGCAT
CGGCAGCGCAGGTGCCGGCACCGGCCGCACCGGTCGCAACTGCGGCGGCATCGCAGCCGGTCGCGGTCGCCGGCGCGGCC
GCATCGCCCGAAGCGGCGAGCGTGGCGGTGGCGCCCGGCCAGTCGACGATCGAACTGAAGGTGAAGCAGGACAGCTGGTT
CAGCGTACGCGACAACCGCGGCAAGGAGCTGTTCTCGGGGCTCGTGCATGCCGGCGAGGCGAAGCAGGTCGCAGGCGACG
GCCCGTTCCGCGTGACGATCGGCAACAAGGCGGGCCTCGACGCGATCGCGTTCGACGGAAAACCCGTCGATCCGGCAAAA
TATTCGGCAGCGCGGGGTAACGTGGCGCGGTTCACGTTGCCCTGA

Upstream 100 bases:

>100_bases
CGTCGCGGCGCACGGCGCCGCGCATGGCATGAACAGTTGCGGGGGCGGCCGGTGGAGCCGGCGCGCCCGCCAGTGAAGAA
GAATCGACGCGAGGACAAGG

Downstream 100 bases:

>100_bases
TGCCAAGCGCCGTGGCCGGAGGCTGCCGCCGCGTCGGCAGCCGTGGCAGCACGGCGCTTTTTCAATTCGTGCGCCGCCTC
GCGGCGCATTCCGCGTAAAT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSEPQPSNGAETNAAQPAPAGLESLVAVGSRLAQLREAKGWTVEDVSARLKVAPPKLRALEAGDISHLPGVTFALGVVRS
YAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGADLPRGRVSIPLGHSSRHHPWLWGTALVVVAVIAVLMWHTGGDSSG
WLARLKGNDAQQHASAAATASPVEEASAGGASNAAPVAAVPAAVSEAAPQAAASAAQVPAPAAPVATAAASQPVAVAGAA
ASPEAASVAVAPGQSTIELKVKQDSWFSVRDNRGKELFSGLVHAGEAKQVAGDGPFRVTIGNKAGLDAIAFDGKPVDPAK
YSAARGNVARFTLP

Sequences:

>Translated_334_residues
MSEPQPSNGAETNAAQPAPAGLESLVAVGSRLAQLREAKGWTVEDVSARLKVAPPKLRALEAGDISHLPGVTFALGVVRS
YAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGADLPRGRVSIPLGHSSRHHPWLWGTALVVVAVIAVLMWHTGGDSSG
WLARLKGNDAQQHASAAATASPVEEASAGGASNAAPVAAVPAAVSEAAPQAAASAAQVPAPAAPVATAAASQPVAVAGAA
ASPEAASVAVAPGQSTIELKVKQDSWFSVRDNRGKELFSGLVHAGEAKQVAGDGPFRVTIGNKAGLDAIAFDGKPVDPAK
YSAARGNVARFTLP
>Mature_333_residues
SEPQPSNGAETNAAQPAPAGLESLVAVGSRLAQLREAKGWTVEDVSARLKVAPPKLRALEAGDISHLPGVTFALGVVRSY
AKMLGVDPEPFAQALRRERGVPEVDLSMPASSGADLPRGRVSIPLGHSSRHHPWLWGTALVVVAVIAVLMWHTGGDSSGW
LARLKGNDAQQHASAAATASPVEEASAGGASNAAPVAAVPAAVSEAAPQAAASAAQVPAPAAPVATAAASQPVAVAGAAA
SPEAASVAVAPGQSTIELKVKQDSWFSVRDNRGKELFSGLVHAGEAKQVAGDGPFRVTIGNKAGLDAIAFDGKPVDPAKY
SAARGNVARFTLP

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=343, Percent_Identity=24.7813411078717, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 33776; Mature: 33645

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPQPSNGAETNAAQPAPAGLESLVAVGSRLAQLREAKGWTVEDVSARLKVAPPKLRAL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCHHEEE
EAGDISHLPGVTFALGVVRSYAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGADLPRG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
RVSIPLGHSSRHHPWLWGTALVVVAVIAVLMWHTGGDSSGWLARLKGNDAQQHASAAATA
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHC
SPVEEASAGGASNAAPVAAVPAAVSEAAPQAAASAAQVPAPAAPVATAAASQPVAVAGAA
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCC
ASPEAASVAVAPGQSTIELKVKQDSWFSVRDNRGKELFSGLVHAGEAKQVAGDGPFRVTI
CCCCCCEEEECCCCCEEEEEEECCCCEEECCCCHHHHHHHHHHCCCCHHHCCCCCEEEEE
GNKAGLDAIAFDGKPVDPAKYSAARGNVARFTLP
CCCCCCCEEEECCCCCCCHHHHHCCCCEEEEECC
>Mature Secondary Structure 
SEPQPSNGAETNAAQPAPAGLESLVAVGSRLAQLREAKGWTVEDVSARLKVAPPKLRAL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCHHEEE
EAGDISHLPGVTFALGVVRSYAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGADLPRG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
RVSIPLGHSSRHHPWLWGTALVVVAVIAVLMWHTGGDSSGWLARLKGNDAQQHASAAATA
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHC
SPVEEASAGGASNAAPVAAVPAAVSEAAPQAAASAAQVPAPAAPVATAAASQPVAVAGAA
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCC
ASPEAASVAVAPGQSTIELKVKQDSWFSVRDNRGKELFSGLVHAGEAKQVAGDGPFRVTI
CCCCCCEEEECCCCCEEEEEEECCCCEEECCCCHHHHHHHHHHCCCCHHHCCCCCEEEEE
GNKAGLDAIAFDGKPVDPAKYSAARGNVARFTLP
CCCCCCCEEEECCCCCCCHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA