Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010084 |
Length | 3,448,466 |
Click here to switch to the map view.
The map label for this gene is insJ [C]
Identifier: 161524630
GI number: 161524630
Start: 1603422
End: 1603949
Strand: Direct
Name: insJ [C]
Synonym: Bmul_1457
Alternate gene names: 161524630
Gene position: 1603422-1603949 (Clockwise)
Preceding gene: 161524629
Following gene: 161524631
Centisome position: 46.5
GC content: 58.14
Gene sequence:
>528_bases ATGACGAAGTACGACGAACGTTTCCGACGTCGGGTGGTTCAGGCGTATCTGGCTGGAGAGGCTGGGACCAAGACACTTGC GCATCGTTACGGCGTGGGTAGCACGATGGTCCGACGTTGGGTGGCGAGCTATCGCGAGCATGGCGAAGACGGACTGAGCA AGAAGCACAGCCACTACGACGCGCGATTCAAGCTATCGGTGCTCCAACGGATGTGGCGCGATGAGTTGTCATATGCCCGA GTGGCGGTGGTATTCGGCATTCGCAATGAACGGAGCATCCCGGTTTGGGAGCGCCTGTATCATGAGGGCGGTATAGAAGC CCTGATGCCTCGTCGCCGAGGACGTCCCCCGAAGATGACCACCTTGCCGCCACCGAAGCCTACCGATGATGCCGCGCAGA AAGAGCCGAGCCGCGAGGAACTGCTCAAGGAAATCGTGTATTTGCGCGCGGAGGTGGCGTACCTAAAAAAGCTCGATGCG CTGCTGCAATCAAAGAAGCAGACAGCGCCCAGGAAAAAACGCAAATAA
Upstream 100 bases:
>100_bases CTGAGCGACGCAGGCCGGGCGGCAGCGGACGTAAAAAAACCGGCCCGTGATGAACTGCACCCCAAAAGTTGGACTAGATC CAACCTTTGGGGTGTTTTTC
Downstream 100 bases:
>100_bases TACGTGAGCTTAGGCAATGCCATCCGATCGCCGCGTTACTGAAGGCGGCAGGTCTGGCACGCAGCACGTTCTATTACCAA CTCAAGGTATTGGATGCTGG
Product: HMG-I and HMG-Y DNA-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTKYDERFRRRVVQAYLAGEAGTKTLAHRYGVGSTMVRRWVASYREHGEDGLSKKHSHYDARFKLSVLQRMWRDELSYAR VAVVFGIRNERSIPVWERLYHEGGIEALMPRRRGRPPKMTTLPPPKPTDDAAQKEPSREELLKEIVYLRAEVAYLKKLDA LLQSKKQTAPRKKRK
Sequences:
>Translated_175_residues MTKYDERFRRRVVQAYLAGEAGTKTLAHRYGVGSTMVRRWVASYREHGEDGLSKKHSHYDARFKLSVLQRMWRDELSYAR VAVVFGIRNERSIPVWERLYHEGGIEALMPRRRGRPPKMTTLPPPKPTDDAAQKEPSREELLKEIVYLRAEVAYLKKLDA LLQSKKQTAPRKKRK >Mature_174_residues TKYDERFRRRVVQAYLAGEAGTKTLAHRYGVGSTMVRRWVASYREHGEDGLSKKHSHYDARFKLSVLQRMWRDELSYARV AVVFGIRNERSIPVWERLYHEGGIEALMPRRRGRPPKMTTLPPPKPTDDAAQKEPSREELLKEIVYLRAEVAYLKKLDAL LQSKKQTAPRKKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS150/IS1296 orfA family [H]
Homologues:
Organism=Escherichia coli, GI1789980, Length=169, Percent_Identity=28.9940828402367, Blast_Score=68, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20493; Mature: 20362
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYDERFRRRVVQAYLAGEAGTKTLAHRYGVGSTMVRRWVASYREHGEDGLSKKHSHYD CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH ARFKLSVLQRMWRDELSYARVAVVFGIRNERSIPVWERLYHEGGIEALMPRRRGRPPKMT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCC TLPPPKPTDDAAQKEPSREELLKEIVYLRAEVAYLKKLDALLQSKKQTAPRKKRK CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKYDERFRRRVVQAYLAGEAGTKTLAHRYGVGSTMVRRWVASYREHGEDGLSKKHSHYD CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH ARFKLSVLQRMWRDELSYARVAVVFGIRNERSIPVWERLYHEGGIEALMPRRRGRPPKMT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCC TLPPPKPTDDAAQKEPSREELLKEIVYLRAEVAYLKKLDALLQSKKQTAPRKKRK CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]