Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is ybaB [C]
Identifier: 161524620
GI number: 161524620
Start: 1594205
End: 1594531
Strand: Direct
Name: ybaB [C]
Synonym: Bmul_1447
Alternate gene names: 161524620
Gene position: 1594205-1594531 (Clockwise)
Preceding gene: 161524619
Following gene: 161524621
Centisome position: 46.23
GC content: 63.0
Gene sequence:
>327_bases ATGTTGAAAGGCAACCTCGCCGGACTGATGAAGCAAGCGCAGCAAATGCAGGAAAACATGAGGAAGATGCAGGAGCAGCT TGCGCAGATCGAAGTCGAAGGGCAGTCGGGCGCCGGCCTCGTCAAGGTGACGATGACGTGCCGCAACGAAGTGCGTCGCG TGTCGATCGATCCGAGCCTGCTCGCGGACGACAAGGACATGCTCGAGGATCTCGTCGCGGCCGCGTTCAACGACGCGGTG CGCAAGGCCGAGGCGACGTCGCAGGAGAAGATGAGCGGGATGACGTCGGGCCTGCCGCTGCCGCCGGGCTTCAAGCTGCC GTTCTGA
Upstream 100 bases:
>100_bases CATTGAACGGACTGCGCCGCGACAGGCACAATCACGCCCCAACACATTGGCCGGCACGCGCCGCGTGCCGGTTTTCACAC GATCGAGAAGGAGTATTCCC
Downstream 100 bases:
>100_bases ACGCCGCGTTCGTCTCGACGTCTGCCGCCGTATGAAACAACCGTCCGCCCTGTCCGCGCTCGTCGAAGCGCTGCGCGCGC TGCCCGGCGTCGGGCCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MLKGNLAGLMKQAQQMQENMRKMQEQLAQIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSLLADDKDMLEDLVAAAFNDAV RKAEATSQEKMSGMTSGLPLPPGFKLPF
Sequences:
>Translated_108_residues MLKGNLAGLMKQAQQMQENMRKMQEQLAQIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSLLADDKDMLEDLVAAAFNDAV RKAEATSQEKMSGMTSGLPLPPGFKLPF >Mature_108_residues MLKGNLAGLMKQAQQMQENMRKMQEQLAQIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSLLADDKDMLEDLVAAAFNDAV RKAEATSQEKMSGMTSGLPLPPGFKLPF
Specific function: Unknown
COG id: COG0718
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0133 family [H]
Homologues:
Organism=Escherichia coli, GI1786677, Length=106, Percent_Identity=68.8679245283019, Blast_Score=152, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004401 [H]
Pfam domain/function: PF02575 DUF149 [H]
EC number: NA
Molecular weight: Translated: 11812; Mature: 11812
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKGNLAGLMKQAQQMQENMRKMQEQLAQIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEHHHHHHHHHCCCCCCHH LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPGFKLPF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLKGNLAGLMKQAQQMQENMRKMQEQLAQIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEHHHHHHHHHCCCCCCHH LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPGFKLPF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA