| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161524572
Identifier: 161524572
GI number: 161524572
Start: 1542317
End: 1543234
Strand: Direct
Name: 161524572
Synonym: Bmul_1399
Alternate gene names: NA
Gene position: 1542317-1543234 (Clockwise)
Preceding gene: 161524571
Following gene: 161524573
Centisome position: 44.72
GC content: 74.73
Gene sequence:
>918_bases ATGGACTGTAACGAAGCGCGCGCGCTGCTGGATGCGGACGTCGACCGCGAGCTGTCGCCGCCGGATGCGCTGCGGGTCCA GCAGCACGTCGACGAATGCGAGCTGTGCCGGCGCGAACGAGAGCGCATCGTCGCGCTCTCGCATGCCGTGCGGGCCGCCG ACTATCATCGCGCGCCGGACGCGCTGCGCGCGCGGATCGCCGCGCTGCAGCCGGAGGGGGAGGTGCGGGCGGCGACCGCG CCGATGGGCGATCGAACGGGGCCGGAACGGACGCGCGACGGCGGATTCGGTGCGCCCCCCCAGCCGCAGCCGCGCGGCCG GCGGCGGTTTTCATGGCTCGGCGGTCGCGGTGCGTCCGCGCGCCCGGCTGCCGCGGCATCGGGCACGCGCGCGCCGGCGC TGCCGGGGCTCGGCTGGGGCGTTGCGCTCGTCGTCGCGCTGGCGGCAGCGGGCGGCATCGCGGTGTCCGCGCATCGCGCC GAGACCGACCGCACGGTCGACGAACTGGTCGCGAGCCACGTGCGCGCGGGGTTGTCCGCGCGCGATATCGACGTGATCTC GACCGATCGGCACACGGTCAAGCCGTGGTTCAACGGGCGGCTCGACTACGCGCCGCCGGTCGAGGATCTCGGCGCGAACG GCTTCGTGCTCGTCGGCGGCCGGCTCGACTATGTCGACCGACGCCGCGTCGCGGTGCTCGTGTACCGGTATCGGCAGCAT GTGATCGACGTCTACGTGTCGCCGGCGGGCGACGGACGCGCCGCGCCGTACGCAACCGTGTCGCAGGGCTACGCCGTCGA TCGCTGGACGGCGGCCGGCATGACCTGGTGGGCCGTGACCGACGCGGAGCCGTCGGCGCTCGCGGCGTTCCGGGCAGCGC TTTCGGCGCGCATCGGCGCGGCCGGCGGCGAACAATGA
Upstream 100 bases:
>100_bases CGTCGGCGGCTCGCCGCGCTGCTCGGCGAGGAAGCCGTGCCGGCGCGCGGCGAGCGGGCGGCGCGCACGCCGGCCGGCGG ATCGGCATCGGAGGCTATCG
Downstream 100 bases:
>100_bases CGCCGGTGGGCGAAGCGGCGGGGCGGTGAACGACAGACACCCGACCATCCCGCCCGCGCCGCAGCCCGGCGCCGACACGC GCCGCGTTCCGTCCCGATAT
Product: putative transmembrane anti-sigma factor
Products: NA
Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Protein
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MDCNEARALLDADVDRELSPPDALRVQQHVDECELCRRERERIVALSHAVRAADYHRAPDALRARIAALQPEGEVRAATA PMGDRTGPERTRDGGFGAPPQPQPRGRRRFSWLGGRGASARPAAAASGTRAPALPGLGWGVALVVALAAAGGIAVSAHRA ETDRTVDELVASHVRAGLSARDIDVISTDRHTVKPWFNGRLDYAPPVEDLGANGFVLVGGRLDYVDRRRVAVLVYRYRQH VIDVYVSPAGDGRAAPYATVSQGYAVDRWTAAGMTWWAVTDAEPSALAAFRAALSARIGAAGGEQ
Sequences:
>Translated_305_residues MDCNEARALLDADVDRELSPPDALRVQQHVDECELCRRERERIVALSHAVRAADYHRAPDALRARIAALQPEGEVRAATA PMGDRTGPERTRDGGFGAPPQPQPRGRRRFSWLGGRGASARPAAAASGTRAPALPGLGWGVALVVALAAAGGIAVSAHRA ETDRTVDELVASHVRAGLSARDIDVISTDRHTVKPWFNGRLDYAPPVEDLGANGFVLVGGRLDYVDRRRVAVLVYRYRQH VIDVYVSPAGDGRAAPYATVSQGYAVDRWTAAGMTWWAVTDAEPSALAAFRAALSARIGAAGGEQ >Mature_305_residues MDCNEARALLDADVDRELSPPDALRVQQHVDECELCRRERERIVALSHAVRAADYHRAPDALRARIAALQPEGEVRAATA PMGDRTGPERTRDGGFGAPPQPQPRGRRRFSWLGGRGASARPAAAASGTRAPALPGLGWGVALVVALAAAGGIAVSAHRA ETDRTVDELVASHVRAGLSARDIDVISTDRHTVKPWFNGRLDYAPPVEDLGANGFVLVGGRLDYVDRRRVAVLVYRYRQH VIDVYVSPAGDGRAAPYATVSQGYAVDRWTAAGMTWWAVTDAEPSALAAFRAALSARIGAAGGEQ
Specific function: Unknown
COG id: COG5662
COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32608; Mature: 32608
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCNEARALLDADVDRELSPPDALRVQQHVDECELCRRERERIVALSHAVRAADYHRAPD CCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALRARIAALQPEGEVRAATAPMGDRTGPERTRDGGFGAPPQPQPRGRRRFSWLGGRGASA HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC RPAAAASGTRAPALPGLGWGVALVVALAAAGGIAVSAHRAETDRTVDELVASHVRAGLSA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC RDIDVISTDRHTVKPWFNGRLDYAPPVEDLGANGFVLVGGRLDYVDRRRVAVLVYRYRQH CCEEEEECCCCEECHHHCCCCCCCCCHHHHCCCCEEEECCEECCCHHHHHHHHHHHHHHH VIDVYVSPAGDGRAAPYATVSQGYAVDRWTAAGMTWWAVTDAEPSALAAFRAALSARIGA EEEEEEECCCCCCCCCCEECCCCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHCC AGGEQ CCCCC >Mature Secondary Structure MDCNEARALLDADVDRELSPPDALRVQQHVDECELCRRERERIVALSHAVRAADYHRAPD CCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALRARIAALQPEGEVRAATAPMGDRTGPERTRDGGFGAPPQPQPRGRRRFSWLGGRGASA HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC RPAAAASGTRAPALPGLGWGVALVVALAAAGGIAVSAHRAETDRTVDELVASHVRAGLSA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC RDIDVISTDRHTVKPWFNGRLDYAPPVEDLGANGFVLVGGRLDYVDRRRVAVLVYRYRQH CCEEEEECCCCEECHHHCCCCCCCCCHHHHCCCCEEEECCEECCCHHHHHHHHHHHHHHH VIDVYVSPAGDGRAAPYATVSQGYAVDRWTAAGMTWWAVTDAEPSALAAFRAALSARIGA EEEEEEECCCCCCCCCCEECCCCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHCC AGGEQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA