| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is mrcA [H]
Identifier: 161524494
GI number: 161524494
Start: 1449982
End: 1452495
Strand: Direct
Name: mrcA [H]
Synonym: Bmul_1321
Alternate gene names: 161524494
Gene position: 1449982-1452495 (Clockwise)
Preceding gene: 161524489
Following gene: 161524495
Centisome position: 42.05
GC content: 66.67
Gene sequence:
>2514_bases ATGCCAATCATCAAACGACCGCCTTCCTCGTCCGACCGGACCGAACCTCACTACACGCTGCGCCGTGCGCCGTCCGGCGC CTATTACACCGATGACGACGATCGCGGCGACGACCGCCACGCCGCACGCAGCGCAGGCGGAGGCGGCCGTTCGTTCGGCG GACGCATCGCGCTGTGGTTCGTCGGACTGTTCGCGACGATCGCGATCGTCGGTGCGCTGATCGTCGGCTACGCGCTCGTC GTGATGGCGCCGCAGCTGCCGTCGCTCGACGCGCTGACCAACTATCAGCCGAAGGTCCCGCTGCGCGTCTTCACGGCCGA CCACGTGCTGATCGGCGAGTTCGGCGAGGAGCGCCGCAGCCTCGTGCGCTTCCAGGACATTCCCGACGTGATGAAGAAGG CGGTGCTCGCGATCGAGGACTACCGCTTCTACGAGCACGGCGGCGTCGACTTCGTCGGCATCCTGCGTGCGGGCGTGGCC GACCTGATGCACGGCGGCGCGCGGCAGGGCGCGAGCACGATCACGATGCAGGTCGCGCGCAACTTCTTCCTGTCGAGCGA GAAGACCTATACGCGCAAGATCTACGAGATGCTGCTCGCGTACAAGATCGAGAAGGCGCTGACGAAGGACCAGATTCTCG AGCTGTACATGAACCAGATCTATCTGGGCCAGCGCGCCTACGGCTTCGCGGCCGCCGCGCGCGTGTACTTCGGCAAGGAC CTGAAGGACATCACGCTCGCGGAAGCCGCGATGCTCGCGGGGCTGCCGAAGGCGCCGTCCGCGTACAACCCGGTCGTCAA TCCGAAGCGCGCGAAGGTGCGTCAGGAATACATCCTGAAGCGGATGCTCGAGATCGGCTACATCACGCAGCCGCAGTACG AGCAGGCCGTGAAGGAGGAGATCCACGTGCGCACGCCGGGCAACCAGTACGCGGTGCACGGCGAATATGTCGCCGAAATG GTGCGGCAGATGATGTACCAGCAGTACAAGGATGAAACGTACACGCGCGGGCTGACCGTCACGACGACGATCAACTCGGC CGATCAGGAAGCCGCGTATCAGGCCGTGCGTCGCGGCATTCTCGACTACGAGCGTCGGCACGGCTATCGCGGGCCCGAAG GCACGATCAATTTGCCGCCGGCCGGCGACGAGCGCGACGAAGCGATCGACGACGCGCTCGCCGATCACCCGGACAACGGC GACCTGCAATCGGCGGTCGTGCTGTCGGCCGCACCGAACGCGGTCGACGTGCAGTTCGTCGGCGGCGCGACGACGCGCAT CGGCGCGGCCGGGCTGCGCTTCGTGTCGGGCGCGTTGAGCCCGCGCGCGAACAACACGCTGCGCATCCGGCCCGGTTCGA TCGTGCGTGTACTGAAGGACGCGAAGACCGGCTGGCAGATCGTGCAGCTGCCGCAGGTCGAAGGCGCGCTCATCGCGCTT GCACCGCAGGACGGCGCGATCCGTTCGCTCGTCGGCGGCTTCGACTTCAACAAGAGCAAATTCAACCACGTGACGCAGGC ATGGCGGCAGCCGGGCTCGTCGTTCAAGCCGTTCATCTATTCGGCCTCGCTCGACAAGGGGCTCGGGCCGGCGACGATCA TCAACGATGCGCCGCTGTACTTCCCGCCGAGCGTGCCGGGCGGCACCGCGTGGGAGCCGAAGGACGACGATCAGCCCGAC GGCCCCATGACGATGCGCACCGGCCTGCAGCGTTCGAAGAACCTCGTGTCGATCCGGATCCTCGCATCGATCGGCACGCA ATACGCGCAGGAGTACGTGACGCAGCGCTTCGGCTTCGATCCGAAGAAGACGCCGCCGTATCTGCCGATGGCGCTCGGCG CGGGCCTCGTGACGCCGTTGCAGCTCGCGACCGGCTACGCGGTGTTCGCGAACGGCGGCTACAAGGTCGATCCGTATCTG ATCGCCGAAGTCGACGACGCGCGCGGCCAGCCGCTGCAGAAATCGCAGCCCGTGATCGCGGGCAGCACGGCGCCGCGCAC GATCGAAGGCCGCAACGCCTACGTGATGAACAGCCTGCTGCATACGGTCGCGACGGCCGGCACCGGCGCGGGCACCAACG CGCTGGGCCGCAACGACCTGCAAGGCAAGACCGGTACGACGAACGACGCGAAGGACGGCTGGTTCGCCGGCTATCAGCAA TCGCTCGTCGCGGTCGCGTGGATGGGCTTCGATCAGCCGAAGAGCCTCGGCAGCCGCGAATTCGGCGCGCAGCTCGCGCT GCCGATCTGGGTGAACTACATGCGTACCGCGCTGAATGGCGTGCCCGAGCAGCAGATGCCAATGCCGGACGGCCTGACGA CGATCGACGGCGAGCTGTATTACGCCGATCGCACGCCGGGCAACGGGTTCGTCGCGAGCGTCGACATCAACCCGGCGGCG AATGCGATCAGCGCGAACGATGCACTTGGGTCGGCCGGGGCGGAAGGGCTCACGCCGCCGCCGGTCACGCCGCAGGAGAA GCAGCAGATCATGGACATGTTCGAGAGCAAGTAG
Upstream 100 bases:
>100_bases CGGTCTGTCGACGTGACTGTAGCCACGACATACCACTCCGACTCATCCGCCTGCATTTTCCGCATGCGTCCGAGGGCACC ACGCAGCCCGCCATTCCGAC
Downstream 100 bases:
>100_bases GCGGTGCGCTGTTCTTGATGCATGCGACGGGCGCCTTCGGGCGCCCGTTTTTTTGCTGATCGTGGATTCCTGCGGAGCGC TTGGGCAAGGTCGGTTTTCG
Product: 1A family penicillin-binding protein
Products: NA
Alternate protein names: PBP-1a; PBP1a; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 837; Mature: 836
Protein sequence:
>837_residues MPIIKRPPSSSDRTEPHYTLRRAPSGAYYTDDDDRGDDRHAARSAGGGGRSFGGRIALWFVGLFATIAIVGALIVGYALV VMAPQLPSLDALTNYQPKVPLRVFTADHVLIGEFGEERRSLVRFQDIPDVMKKAVLAIEDYRFYEHGGVDFVGILRAGVA DLMHGGARQGASTITMQVARNFFLSSEKTYTRKIYEMLLAYKIEKALTKDQILELYMNQIYLGQRAYGFAAAARVYFGKD LKDITLAEAAMLAGLPKAPSAYNPVVNPKRAKVRQEYILKRMLEIGYITQPQYEQAVKEEIHVRTPGNQYAVHGEYVAEM VRQMMYQQYKDETYTRGLTVTTTINSADQEAAYQAVRRGILDYERRHGYRGPEGTINLPPAGDERDEAIDDALADHPDNG DLQSAVVLSAAPNAVDVQFVGGATTRIGAAGLRFVSGALSPRANNTLRIRPGSIVRVLKDAKTGWQIVQLPQVEGALIAL APQDGAIRSLVGGFDFNKSKFNHVTQAWRQPGSSFKPFIYSASLDKGLGPATIINDAPLYFPPSVPGGTAWEPKDDDQPD GPMTMRTGLQRSKNLVSIRILASIGTQYAQEYVTQRFGFDPKKTPPYLPMALGAGLVTPLQLATGYAVFANGGYKVDPYL IAEVDDARGQPLQKSQPVIAGSTAPRTIEGRNAYVMNSLLHTVATAGTGAGTNALGRNDLQGKTGTTNDAKDGWFAGYQQ SLVAVAWMGFDQPKSLGSREFGAQLALPIWVNYMRTALNGVPEQQMPMPDGLTTIDGELYYADRTPGNGFVASVDINPAA NAISANDALGSAGAEGLTPPPVTPQEKQQIMDMFESK
Sequences:
>Translated_837_residues MPIIKRPPSSSDRTEPHYTLRRAPSGAYYTDDDDRGDDRHAARSAGGGGRSFGGRIALWFVGLFATIAIVGALIVGYALV VMAPQLPSLDALTNYQPKVPLRVFTADHVLIGEFGEERRSLVRFQDIPDVMKKAVLAIEDYRFYEHGGVDFVGILRAGVA DLMHGGARQGASTITMQVARNFFLSSEKTYTRKIYEMLLAYKIEKALTKDQILELYMNQIYLGQRAYGFAAAARVYFGKD LKDITLAEAAMLAGLPKAPSAYNPVVNPKRAKVRQEYILKRMLEIGYITQPQYEQAVKEEIHVRTPGNQYAVHGEYVAEM VRQMMYQQYKDETYTRGLTVTTTINSADQEAAYQAVRRGILDYERRHGYRGPEGTINLPPAGDERDEAIDDALADHPDNG DLQSAVVLSAAPNAVDVQFVGGATTRIGAAGLRFVSGALSPRANNTLRIRPGSIVRVLKDAKTGWQIVQLPQVEGALIAL APQDGAIRSLVGGFDFNKSKFNHVTQAWRQPGSSFKPFIYSASLDKGLGPATIINDAPLYFPPSVPGGTAWEPKDDDQPD GPMTMRTGLQRSKNLVSIRILASIGTQYAQEYVTQRFGFDPKKTPPYLPMALGAGLVTPLQLATGYAVFANGGYKVDPYL IAEVDDARGQPLQKSQPVIAGSTAPRTIEGRNAYVMNSLLHTVATAGTGAGTNALGRNDLQGKTGTTNDAKDGWFAGYQQ SLVAVAWMGFDQPKSLGSREFGAQLALPIWVNYMRTALNGVPEQQMPMPDGLTTIDGELYYADRTPGNGFVASVDINPAA NAISANDALGSAGAEGLTPPPVTPQEKQQIMDMFESK >Mature_836_residues PIIKRPPSSSDRTEPHYTLRRAPSGAYYTDDDDRGDDRHAARSAGGGGRSFGGRIALWFVGLFATIAIVGALIVGYALVV MAPQLPSLDALTNYQPKVPLRVFTADHVLIGEFGEERRSLVRFQDIPDVMKKAVLAIEDYRFYEHGGVDFVGILRAGVAD LMHGGARQGASTITMQVARNFFLSSEKTYTRKIYEMLLAYKIEKALTKDQILELYMNQIYLGQRAYGFAAAARVYFGKDL KDITLAEAAMLAGLPKAPSAYNPVVNPKRAKVRQEYILKRMLEIGYITQPQYEQAVKEEIHVRTPGNQYAVHGEYVAEMV RQMMYQQYKDETYTRGLTVTTTINSADQEAAYQAVRRGILDYERRHGYRGPEGTINLPPAGDERDEAIDDALADHPDNGD LQSAVVLSAAPNAVDVQFVGGATTRIGAAGLRFVSGALSPRANNTLRIRPGSIVRVLKDAKTGWQIVQLPQVEGALIALA PQDGAIRSLVGGFDFNKSKFNHVTQAWRQPGSSFKPFIYSASLDKGLGPATIINDAPLYFPPSVPGGTAWEPKDDDQPDG PMTMRTGLQRSKNLVSIRILASIGTQYAQEYVTQRFGFDPKKTPPYLPMALGAGLVTPLQLATGYAVFANGGYKVDPYLI AEVDDARGQPLQKSQPVIAGSTAPRTIEGRNAYVMNSLLHTVATAGTGAGTNALGRNDLQGKTGTTNDAKDGWFAGYQQS LVAVAWMGFDQPKSLGSREFGAQLALPIWVNYMRTALNGVPEQQMPMPDGLTTIDGELYYADRTPGNGFVASVDINPAAN AISANDALGSAGAEGLTPPPVTPQEKQQIMDMFESK
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG5009
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI87082258, Length=818, Percent_Identity=39.7310513447433, Blast_Score=535, Evalue=1e-153, Organism=Escherichia coli, GI1786343, Length=249, Percent_Identity=36.5461847389558, Blast_Score=144, Evalue=3e-35, Organism=Escherichia coli, GI1788867, Length=229, Percent_Identity=31.8777292576419, Blast_Score=112, Evalue=1e-25, Organism=Escherichia coli, GI1789601, Length=176, Percent_Identity=33.5227272727273, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.-; 3.4.-.- [C]
Molecular weight: Translated: 91038; Mature: 90907
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIIKRPPSSSDRTEPHYTLRRAPSGAYYTDDDDRGDDRHAARSAGGGGRSFGGRIALWF CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH VGLFATIAIVGALIVGYALVVMAPQLPSLDALTNYQPKVPLRVFTADHVLIGEFGEERRS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEECCEEEECCCCHHHHH LVRFQDIPDVMKKAVLAIEDYRFYEHGGVDFVGILRAGVADLMHGGARQGASTITMQVAR HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH NFFLSSEKTYTRKIYEMLLAYKIEKALTKDQILELYMNQIYLGQRAYGFAAAARVYFGKD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC LKDITLAEAAMLAGLPKAPSAYNPVVNPKRAKVRQEYILKRMLEIGYITQPQYEQAVKEE CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IHVRTPGNQYAVHGEYVAEMVRQMMYQQYKDETYTRGLTVTTTINSADQEAAYQAVRRGI EEEECCCCCEEECHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCHHHHHHHHHHHHH LDYERRHGYRGPEGTINLPPAGDERDEAIDDALADHPDNGDLQSAVVLSAAPNAVDVQFV HHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEE GGATTRIGAAGLRFVSGALSPRANNTLRIRPGSIVRVLKDAKTGWQIVQLPQVEGALIAL CCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEEECCCCCEEEEE APQDGAIRSLVGGFDFNKSKFNHVTQAWRQPGSSFKPFIYSASLDKGLGPATIINDAPLY ECCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCCCE FPPSVPGGTAWEPKDDDQPDGPMTMRTGLQRSKNLVSIRILASIGTQYAQEYVTQRFGFD ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCC PKKTPPYLPMALGAGLVTPLQLATGYAVFANGGYKVDPYLIAEVDDARGQPLQKSQPVIA CCCCCCCCHHHHCCCHHHHHHHHCCEEEEECCCEEECCEEEEEECCCCCCCCCCCCCEEE GSTAPRTIEGRNAYVMNSLLHTVATAGTGAGTNALGRNDLQGKTGTTNDAKDGWFAGYQQ CCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH SLVAVAWMGFDQPKSLGSREFGAQLALPIWVNYMRTALNGVPEQQMPMPDGLTTIDGELY HHHHHHHCCCCCCHHCCCHHHCCEEEHHHHHHHHHHHHCCCCHHCCCCCCCCEEECCEEE YADRTPGNGFVASVDINPAANAISANDALGSAGAEGLTPPPVTPQEKQQIMDMFESK EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure PIIKRPPSSSDRTEPHYTLRRAPSGAYYTDDDDRGDDRHAARSAGGGGRSFGGRIALWF CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH VGLFATIAIVGALIVGYALVVMAPQLPSLDALTNYQPKVPLRVFTADHVLIGEFGEERRS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEECCEEEECCCCHHHHH LVRFQDIPDVMKKAVLAIEDYRFYEHGGVDFVGILRAGVADLMHGGARQGASTITMQVAR HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH NFFLSSEKTYTRKIYEMLLAYKIEKALTKDQILELYMNQIYLGQRAYGFAAAARVYFGKD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC LKDITLAEAAMLAGLPKAPSAYNPVVNPKRAKVRQEYILKRMLEIGYITQPQYEQAVKEE CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IHVRTPGNQYAVHGEYVAEMVRQMMYQQYKDETYTRGLTVTTTINSADQEAAYQAVRRGI EEEECCCCCEEECHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCHHHHHHHHHHHHH LDYERRHGYRGPEGTINLPPAGDERDEAIDDALADHPDNGDLQSAVVLSAAPNAVDVQFV HHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEE GGATTRIGAAGLRFVSGALSPRANNTLRIRPGSIVRVLKDAKTGWQIVQLPQVEGALIAL CCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEEECCCCCEEEEE APQDGAIRSLVGGFDFNKSKFNHVTQAWRQPGSSFKPFIYSASLDKGLGPATIINDAPLY ECCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCCCE FPPSVPGGTAWEPKDDDQPDGPMTMRTGLQRSKNLVSIRILASIGTQYAQEYVTQRFGFD ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCC PKKTPPYLPMALGAGLVTPLQLATGYAVFANGGYKVDPYLIAEVDDARGQPLQKSQPVIA CCCCCCCCHHHHCCCHHHHHHHHCCEEEEECCCEEECCEEEEEECCCCCCCCCCCCCEEE GSTAPRTIEGRNAYVMNSLLHTVATAGTGAGTNALGRNDLQGKTGTTNDAKDGWFAGYQQ CCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH SLVAVAWMGFDQPKSLGSREFGAQLALPIWVNYMRTALNGVPEQQMPMPDGLTTIDGELY HHHHHHHCCCCCCHHCCCHHHCCEEEHHHHHHHHHHHHCCCCHHCCCCCCCCEEECCEEE YADRTPGNGFVASVDINPAANAISANDALGSAGAEGLTPPPVTPQEKQQIMDMFESK EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA