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The map label for this gene is pecT [H]

Identifier: 161523993

GI number: 161523993

Start: 889672

End: 890583

Strand: Reverse

Name: pecT [H]

Synonym: Bmul_0813

Alternate gene names: 161523993

Gene position: 890583-889672 (Counterclockwise)

Preceding gene: 161523995

Following gene: 161523988

Centisome position: 25.83

GC content: 72.7

Gene sequence:

>912_bases
ATGTTGAATGGTCCGATGGAACCGCTGACCGATCCGGCGTCGACGTCGCTCGACATCGCGCTGCTGCGCACCTTTCTCGA
AGTCGTCGACAGCCGCGGCTTCGCGCCGGCCGCCGAACGGCTCGCACTGACGCCGTCCGCGGTCAGCGGCCACATCAAGC
GGCTCGAACAGGCGGCCGGTACCGTGCTGCTCGCACGCACCACGCGGCGGATCGCGCTCACGCCGGCCGGCGACACGCTG
TACGCGTATGCGCGCAACATCGTCGACATGGAGCGCGAAGTGCGCGCGCGCCTGCGCGGCGCGCCGGCACACGGGCGGCT
GCGCGTCGGCGCGTCCGAGGACTTCGCGGCCGCGTGGCTGCCGCAGGTGCTGCGCGCGTTTCGCGATCGCGATCCGTATG
CATCGATCGAGCTGAAGGTCGGGATCACGGCGTCGCTGCTGCGCGAGCAGGCGCTCGGCCGGCTCGACGTCGTGTTCGGC
AAGCAGTGCCGGCAGGTCGAGGCGGCCGGCGAACTGCTGTGGGAAGAGCCGCTCGAATGGGCGTTCGCGGCCGACGCGAC
GCTCGATCGCGACCGCGAAGTGCCGCTCGCGCTGTTCCCCGAGCCGTGCGTGTATCGCGACGCGGCCGTGTCGGCGCTCG
CCGCGTCGCTGCGCCCGTTTCGCGTGCTGTTCGAAAGCGCCAGCATGGCGGGCTGCGTGTCGGCTGCGCTCGCGGGCTTC
GCGGTCACGGTGCTCGCGCGCAGCCAGCTGCGCGCCGGACTGCGCACGTGCGGGCCCGCGGACGGCCTGCCCGCGTTGCC
GGCCGCGCGGTTCTACGCGTTCACGTCGAAGCCGGACGGCGTCGGTGCGGCACTGATCGACGCGGTACGGGACACCGGAC
GGAGGCGGCAGTTCGCGGCCATGCCGCGCTGA

Upstream 100 bases:

>100_bases
CGTAGGCAGTCATCGTGTGCTCCCGTCGATCGGATGGTTCGATGGTAAGCCGCCATTTCGTCACGATTCACGGAGTATCA
TCGATCACTCGTCACATTTC

Downstream 100 bases:

>100_bases
ATGGCGCGATGCGGCGCGCGTGTTGTCGCGGGAATCGATCGCGGTCGTGCCGGATCGTGCCGTACCGCGCCGTCAGTCGC
GATCCGCGTCGGCGACACGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Pectinase gene transcriptional regulator [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLNGPMEPLTDPASTSLDIALLRTFLEVVDSRGFAPAAERLALTPSAVSGHIKRLEQAAGTVLLARTTRRIALTPAGDTL
YAYARNIVDMEREVRARLRGAPAHGRLRVGASEDFAAAWLPQVLRAFRDRDPYASIELKVGITASLLREQALGRLDVVFG
KQCRQVEAAGELLWEEPLEWAFAADATLDRDREVPLALFPEPCVYRDAAVSALAASLRPFRVLFESASMAGCVSAALAGF
AVTVLARSQLRAGLRTCGPADGLPALPAARFYAFTSKPDGVGAALIDAVRDTGRRRQFAAMPR

Sequences:

>Translated_303_residues
MLNGPMEPLTDPASTSLDIALLRTFLEVVDSRGFAPAAERLALTPSAVSGHIKRLEQAAGTVLLARTTRRIALTPAGDTL
YAYARNIVDMEREVRARLRGAPAHGRLRVGASEDFAAAWLPQVLRAFRDRDPYASIELKVGITASLLREQALGRLDVVFG
KQCRQVEAAGELLWEEPLEWAFAADATLDRDREVPLALFPEPCVYRDAAVSALAASLRPFRVLFESASMAGCVSAALAGF
AVTVLARSQLRAGLRTCGPADGLPALPAARFYAFTSKPDGVGAALIDAVRDTGRRRQFAAMPR
>Mature_303_residues
MLNGPMEPLTDPASTSLDIALLRTFLEVVDSRGFAPAAERLALTPSAVSGHIKRLEQAAGTVLLARTTRRIALTPAGDTL
YAYARNIVDMEREVRARLRGAPAHGRLRVGASEDFAAAWLPQVLRAFRDRDPYASIELKVGITASLLREQALGRLDVVFG
KQCRQVEAAGELLWEEPLEWAFAADATLDRDREVPLALFPEPCVYRDAAVSALAASLRPFRVLFESASMAGCVSAALAGF
AVTVLARSQLRAGLRTCGPADGLPALPAARFYAFTSKPDGVGAALIDAVRDTGRRRQFAAMPR

Specific function: Regulates pectinase gene expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788626, Length=256, Percent_Identity=30.859375, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI48994962, Length=146, Percent_Identity=33.5616438356164, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788887, Length=185, Percent_Identity=30.2702702702703, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790208, Length=143, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790399, Length=187, Percent_Identity=28.3422459893048, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787806, Length=243, Percent_Identity=24.2798353909465, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788748, Length=116, Percent_Identity=36.2068965517241, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1788706, Length=139, Percent_Identity=30.2158273381295, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32641; Mature: 32641

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNGPMEPLTDPASTSLDIALLRTFLEVVDSRGFAPAAERLALTPSAVSGHIKRLEQAAG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHC
TVLLARTTRRIALTPAGDTLYAYARNIVDMEREVRARLRGAPAHGRLRVGASEDFAAAWL
EEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
PQVLRAFRDRDPYASIELKVGITASLLREQALGRLDVVFGKQCRQVEAAGELLWEEPLEW
HHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAADATLDRDREVPLALFPEPCVYRDAAVSALAASLRPFRVLFESASMAGCVSAALAGF
HHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTVLARSQLRAGLRTCGPADGLPALPAARFYAFTSKPDGVGAALIDAVRDTGRRRQFAA
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHCC
MPR
CCC
>Mature Secondary Structure
MLNGPMEPLTDPASTSLDIALLRTFLEVVDSRGFAPAAERLALTPSAVSGHIKRLEQAAG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHC
TVLLARTTRRIALTPAGDTLYAYARNIVDMEREVRARLRGAPAHGRLRVGASEDFAAAWL
EEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
PQVLRAFRDRDPYASIELKVGITASLLREQALGRLDVVFGKQCRQVEAAGELLWEEPLEW
HHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAADATLDRDREVPLALFPEPCVYRDAAVSALAASLRPFRVLFESASMAGCVSAALAGF
HHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTVLARSQLRAGLRTCGPADGLPALPAARFYAFTSKPDGVGAALIDAVRDTGRRRQFAA
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHCC
MPR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8626286 [H]