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The map label for this gene is ygdL [H]

Identifier: 161523909

GI number: 161523909

Start: 801746

End: 802603

Strand: Direct

Name: ygdL [H]

Synonym: Bmul_0729

Alternate gene names: 161523909

Gene position: 801746-802603 (Clockwise)

Preceding gene: 161523905

Following gene: 161523912

Centisome position: 23.25

GC content: 69.23

Gene sequence:

>858_bases
ATGTCAGCCGCCGACACCGTCCCGCCGAATTTCTCCGATCTTACCCCGAGCCCGACGATCCAGCTTGACGCGGATCGCGC
GCGGCGCTTCGGCGGCATCGCGCGGCTGTACGGCGCACCGGCGCTCGCCGCGTTCGAGCGCGCGCATGTCGCGGTGATCG
GCATCGGCGGCGTCGGCTCGTGGACGGCCGAGGCACTTGCGCGCAGCGCGATCGGCACGCTGACGCTGATCGATCTCGAC
AACGTCGCGGAGAGCAATACGAACCGGCAGATCCACGCGCTCGACGGCAATTACGGCAAGCCGAAGGTCGATGCGATGGC
CGAGCGCATCGCGCTGATCGATCCCGCCTGCCGCGTGAACCGCATCGAGGATTTCGCGGAACCGGACAACTTCGACGCGC
TGCTCGGCGGCGGCTTCGACTACGTGATCGACGCGATCGACAGCGTGCGCACGAAGGTCGCGCTGATCGCATGGTGCGTC
GCGAAAGGGCAGCCGCTCGTGACGGTCGGCGGTGCGGGCGGTCAGCTCGATCCGACGCGCATTCGCGTCGACGATCTCGC
ACTGACGATCCAGGATCCACTGCTGTCGAAGGTGCGCGCGCAGCTGCGCAAGCAGCACGGCTTTCCGCGCGGGCCGAAGG
CGCGCTTCAAGGTCAGCGCCGTTTATTCGGACGAGCCGCTGATCTATCCGGAAGCGCCCGCGTGCGACATCGAGGACGGC
GCGGAGCCGTCGACGGCAGCGCACGTCGCGGGGCTGAACTGCGCGGGATTCGGTTCGAGCGTCTGCGTGACGGCGAGCTT
CGGGTTCGCGGCGGCCGCGCATGCGTTGCGCGCGATCGCGGCGCGCGCGGCGGGGTAG

Upstream 100 bases:

>100_bases
CAGTATAGCGAACGCGGAAGAATCGTGCGTGCACAGCGGCGCGTCGCGGCGGGGAGATCAGGCAAAATAGAGGCTGTACG
ACTTACGTTTTCCTTTCTTC

Downstream 100 bases:

>100_bases
CAGGGGAGAGCGCGCTGGCGTGGCGTGCAGGCTCGGCGCGCACGCAGGCGGCGCGACGGCGGTGCGTGCGAACAGCGCAG
GAACAGTGCAGGAACAGCGT

Product: UBA/THIF-type NAD/FAD binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSAADTVPPNFSDLTPSPTIQLDADRARRFGGIARLYGAPALAAFERAHVAVIGIGGVGSWTAEALARSAIGTLTLIDLD
NVAESNTNRQIHALDGNYGKPKVDAMAERIALIDPACRVNRIEDFAEPDNFDALLGGGFDYVIDAIDSVRTKVALIAWCV
AKGQPLVTVGGAGGQLDPTRIRVDDLALTIQDPLLSKVRAQLRKQHGFPRGPKARFKVSAVYSDEPLIYPEAPACDIEDG
AEPSTAAHVAGLNCAGFGSSVCVTASFGFAAAAHALRAIAARAAG

Sequences:

>Translated_285_residues
MSAADTVPPNFSDLTPSPTIQLDADRARRFGGIARLYGAPALAAFERAHVAVIGIGGVGSWTAEALARSAIGTLTLIDLD
NVAESNTNRQIHALDGNYGKPKVDAMAERIALIDPACRVNRIEDFAEPDNFDALLGGGFDYVIDAIDSVRTKVALIAWCV
AKGQPLVTVGGAGGQLDPTRIRVDDLALTIQDPLLSKVRAQLRKQHGFPRGPKARFKVSAVYSDEPLIYPEAPACDIEDG
AEPSTAAHVAGLNCAGFGSSVCVTASFGFAAAAHALRAIAARAAG
>Mature_284_residues
SAADTVPPNFSDLTPSPTIQLDADRARRFGGIARLYGAPALAAFERAHVAVIGIGGVGSWTAEALARSAIGTLTLIDLDN
VAESNTNRQIHALDGNYGKPKVDAMAERIALIDPACRVNRIEDFAEPDNFDALLGGGFDYVIDAIDSVRTKVALIAWCVA
KGQPLVTVGGAGGQLDPTRIRVDDLALTIQDPLLSKVRAQLRKQHGFPRGPKARFKVSAVYSDEPLIYPEAPACDIEDGA
EPSTAAHVAGLNCAGFGSSVCVTASFGFAAAAHALRAIAARAAG

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=258, Percent_Identity=53.8759689922481, Blast_Score=271, Evalue=4e-74,
Organism=Escherichia coli, GI1787048, Length=125, Percent_Identity=32, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082356, Length=131, Percent_Identity=32.0610687022901, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321790, Length=201, Percent_Identity=27.363184079602, Blast_Score=92, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6322825, Length=143, Percent_Identity=34.2657342657343, Blast_Score=85, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24582879, Length=143, Percent_Identity=32.1678321678322, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 29759; Mature: 29628

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAADTVPPNFSDLTPSPTIQLDADRARRFGGIARLYGAPALAAFERAHVAVIGIGGVGS
CCCCCCCCCCCCCCCCCCEEEECHHHHHHHCCHHHHHCCHHHHHHCCCEEEEEEECCCCH
WTAEALARSAIGTLTLIDLDNVAESNTNRQIHALDGNYGKPKVDAMAERIALIDPACRVN
HHHHHHHHHHCCEEEEEECHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHH
RIEDFAEPDNFDALLGGGFDYVIDAIDSVRTKVALIAWCVAKGQPLVTVGGAGGQLDPTR
HHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCE
IRVDDLALTIQDPLLSKVRAQLRKQHGFPRGPKARFKVSAVYSDEPLIYPEAPACDIEDG
EEEEHEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCC
AEPSTAAHVAGLNCAGFGSSVCVTASFGFAAAAHALRAIAARAAG
CCCCCHHHHCCCEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAADTVPPNFSDLTPSPTIQLDADRARRFGGIARLYGAPALAAFERAHVAVIGIGGVGS
CCCCCCCCCCCCCCCCCEEEECHHHHHHHCCHHHHHCCHHHHHHCCCEEEEEEECCCCH
WTAEALARSAIGTLTLIDLDNVAESNTNRQIHALDGNYGKPKVDAMAERIALIDPACRVN
HHHHHHHHHHCCEEEEEECHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHH
RIEDFAEPDNFDALLGGGFDYVIDAIDSVRTKVALIAWCVAKGQPLVTVGGAGGQLDPTR
HHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCE
IRVDDLALTIQDPLLSKVRAQLRKQHGFPRGPKARFKVSAVYSDEPLIYPEAPACDIEDG
EEEEHEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCC
AEPSTAAHVAGLNCAGFGSSVCVTASFGFAAAAHALRAIAARAAG
CCCCCHHHHCCCEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]