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The map label for this gene is cc4 [H]

Identifier: 161523809

GI number: 161523809

Start: 689174

End: 689884

Strand: Reverse

Name: cc4 [H]

Synonym: Bmul_0629

Alternate gene names: 161523809

Gene position: 689884-689174 (Counterclockwise)

Preceding gene: 161523811

Following gene: 161523808

Centisome position: 20.01

GC content: 69.9

Gene sequence:

>711_bases
TTGATCGGCGGAGCGGGCCTTACGAGCGCTGCCCAAGCGCAGACCAAGCCCACGGAGCAAGCCCACGCGCAGCAGGCGCC
GCTCAAGGCACCCGATACGATGGCCGAGCGTGTGCGCGGCTGTACCGCATGCCACGGCGTCCACGGCCAGGGCACGGACA
ACGATTACTTCCCGCGTCTGGCAGGCAAGCCGGCCGAGTACCTGTACAACCAGCTCGTCAACTTCCGCGACGGCCGGCGC
AAGTATCCGCCGATGAACTATCTGCTCACGTATCTGAGCGACGATTACCTGCGCGAGATCGCCGAGCACTTCTCGGCCGA
GCGCCCGCCGTACCCGACGCCGGCGAAGCCGACGCTGCCGGCCGCGACGCTCGCGCGCGGCAAGCAGCTCGTCACGCAGG
GCGATCCGTCGCGCAAGCTGCCGGCTTGCGTCGCCTGCCACGGCGCCGCGCTGACCGGCATGCAGCCGGCGATCCCGGGC
CTCGTCGGCCTGCACGCCGACTACCTGAGCGCGCAGCTCGGCGCATGGCGTTCGGGCAACCGCCACGCCAAGGCACCGGA
CTGCATGCACGACATCGCATCGAAGCTTTCCGACGAAGACGTGACGGCCGTGACGGCATGGCTCGCCGCGCAGCCGGCGC
CCGCCAACCCCGTGCCGGCTCCGGCGCGTTCGATGAAGACTCCGCTCGCCTGCGGCAGCGAACCGCAATAA

Upstream 100 bases:

>100_bases
TCATGCCGAGCCGATCGTAGCCCGGACAGGTCCCCGACGAATAAACATGGAGTCTCGTGTGTCTTCAAGACGCCTCATCC
GTCCGCTGCTCGCCGTTCTG

Downstream 100 bases:

>100_bases
GGCAAGGGAGACAGACATAATGAAACGCAAGTCCCTGTTTGCACTCTCGGCTGTCGCGATCGTCGCGGCAGCGGCTCTCG
TGCCCGTGCTCTGGTCGGGC

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MIGGAGLTSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRR
KYPPMNYLLTYLSDDYLREIAEHFSAERPPYPTPAKPTLPAATLARGKQLVTQGDPSRKLPACVACHGAALTGMQPAIPG
LVGLHADYLSAQLGAWRSGNRHAKAPDCMHDIASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ

Sequences:

>Translated_236_residues
MIGGAGLTSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRR
KYPPMNYLLTYLSDDYLREIAEHFSAERPPYPTPAKPTLPAATLARGKQLVTQGDPSRKLPACVACHGAALTGMQPAIPG
LVGLHADYLSAQLGAWRSGNRHAKAPDCMHDIASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ
>Mature_236_residues
MIGGAGLTSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRR
KYPPMNYLLTYLSDDYLREIAEHFSAERPPYPTPAKPTLPAATLARGKQLVTQGDPSRKLPACVACHGAALTGMQPAIPG
LVGLHADYLSAQLGAWRSGNRHAKAPDCMHDIASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 25145; Mature: 25145

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGGAGLTSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRL
CCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AGKPAEYLYNQLVNFRDGRRKYPPMNYLLTYLSDDYLREIAEHFSAERPPYPTPAKPTLP
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCC
AATLARGKQLVTQGDPSRKLPACVACHGAALTGMQPAIPGLVGLHADYLSAQLGAWRSGN
HHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RHAKAPDCMHDIASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIGGAGLTSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRL
CCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AGKPAEYLYNQLVNFRDGRRKYPPMNYLLTYLSDDYLREIAEHFSAERPPYPTPAKPTLP
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCC
AATLARGKQLVTQGDPSRKLPACVACHGAALTGMQPAIPGLVGLHADYLSAQLGAWRSGN
HHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RHAKAPDCMHDIASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]