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The map label for this gene is glpD [H]

Identifier: 161523800

GI number: 161523800

Start: 679330

End: 680853

Strand: Reverse

Name: glpD [H]

Synonym: Bmul_0620

Alternate gene names: 161523800

Gene position: 680853-679330 (Counterclockwise)

Preceding gene: 161523802

Following gene: 161523799

Centisome position: 19.74

GC content: 69.82

Gene sequence:

>1524_bases
GTGAATCAACCGAATCGCTACGATCTGCTCGTCGTCGGCGGCGGCATCAACGGCGCGGGCATCGCGCGCGATGCGGCCGG
CCGCGGCCTGTCGGTTTTGCTCTGCGAGCAGGACGATCTCGCATCGCACACGTCGTCGGCCAGCACGAAGCTGATTCACG
GCGGTCTGCGCTATCTCGAGTACAAGGAATTCGGGCTCGTGCGCAAGGCGCTGCAGGAGCGCGAGACGCTGCTGCGCGCG
GCGCCGCACATCATGTGGCCGCTGCGCTTCGTGATGCCGCACATGCCGAACCTGCGTCCGGCCTGGCTGATCCGCATCGG
CCTGTTCCTCTACGATCACCTCGCGAAACGCGAGCTGCTGCCCGGCTCGCGCGGCATCGACATGCGCCGCCATGCGGCCG
GCGCGCCGCTCGTCGATTCGATCCGGCGCGGCTTCGTCTATTCGGACGGCTGGGTCGACGATGCGCGCCTCGTCGTGCTG
AACGCGCTCGACGCGAAAGAGCGCGGCGCCGAGATCCTCACGCGCACGAAGCTCGTGTCGGCCGAGCGCCGCAGCGACGA
ATGGGAAGCGCGGCTGCAGCAGCCGGACGGCGCGATCCGCGTCGTGCGTGCGCGTGCGATCGCGAACGCGGCCGGCCCGT
GGGTCGGCGACGTGCTGCACGGCGCGCTCGGGCGCGGCGCGCATCACAGCGTGCGGCTCGTGAAGGGCAGCCACATCGTC
ACGCGCCGGCTGTTCGATCACGATCACGCCTACATCTTCCAGAACCCCGACAAGCGGATCATCTTCGCGATCCCGTACGA
GCGCGACTTCACGCTGATCGGCACGACCGACGTCGAATACACGAGCGATCCGGCGCGCGTCGCGATCGATCGCGACGAAA
CGCAGTATCTGTGCGATTCGATCAACCGCTACTTCAAGCGCAAGATCTCGCCGGCCGACGTGCACTGGACCTATTCGGGC
GTGCGGCCGCTGCTCGAAGACGAAAACGCCGCGAACGCGTCGGCCGTCACGCGCGACTACCGGCTCGAGATGGACGACGG
CGAAGGCGCACCGCTGCTCTCGGTGTTCGGCGGCAAGATCACGACGTTCCGCAAGCTCGCCGAAGAAGCCGGCGACATGC
TGTGCCGCGCGCTCGGCCGCGACGCACCGGCATGGACGGCCGGCGCCCCGCTGCCGGGCGGCGACATCGCGAACGCCAAA
TTCGATGCGTTCGCCGACGCATTCGCGAAGCGCCATCGCTGGCTGCCCGCGCCGCTCGCGCGCCGGTATGCGCGCGCGTA
CGGCACGCGTGCCGCGCGCGTCGTCGGCAATGCGCAGTCGCTGGCCGATCTCGGCGCCGAGATCGTGCCCGGCCTGTTCG
AGGCCGAGCTGCGCTACCTGCGCGATACCGAATGGGCGACCAGCGCACAGGACGTGCTGTGGCGCCGCTCGAAGCTCGGG
CTGCACGTCGCGCCGGGCACGCTCGACGCGGCGAGCGCCGCGCTCGATGCGTGGTTCGCGGCCGCGCACGCGCCGCACGC
GTGA

Upstream 100 bases:

>100_bases
GCCCCTCTTTTTCGAACTTTACTTTTTCGATTTCGTTCGTTAAATTTCGAATTCGAACATTTCGTGTTCGATCCATGAAC
TCGAACGATAAGGACAGCAG

Downstream 100 bases:

>100_bases
GCGATCGCCCGTGCAGTTTGCTTGACCGACGTTGATTCACCGACGCGCCGCGGCATACGGCGCGCATCACAACTAATCCA
CGGATGGAGATGAGAGACAT

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MNQPNRYDLLVVGGGINGAGIARDAAGRGLSVLLCEQDDLASHTSSASTKLIHGGLRYLEYKEFGLVRKALQERETLLRA
APHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHAAGAPLVDSIRRGFVYSDGWVDDARLVVL
NALDAKERGAEILTRTKLVSAERRSDEWEARLQQPDGAIRVVRARAIANAAGPWVGDVLHGALGRGAHHSVRLVKGSHIV
TRRLFDHDHAYIFQNPDKRIIFAIPYERDFTLIGTTDVEYTSDPARVAIDRDETQYLCDSINRYFKRKISPADVHWTYSG
VRPLLEDENAANASAVTRDYRLEMDDGEGAPLLSVFGGKITTFRKLAEEAGDMLCRALGRDAPAWTAGAPLPGGDIANAK
FDAFADAFAKRHRWLPAPLARRYARAYGTRAARVVGNAQSLADLGAEIVPGLFEAELRYLRDTEWATSAQDVLWRRSKLG
LHVAPGTLDAASAALDAWFAAAHAPHA

Sequences:

>Translated_507_residues
MNQPNRYDLLVVGGGINGAGIARDAAGRGLSVLLCEQDDLASHTSSASTKLIHGGLRYLEYKEFGLVRKALQERETLLRA
APHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHAAGAPLVDSIRRGFVYSDGWVDDARLVVL
NALDAKERGAEILTRTKLVSAERRSDEWEARLQQPDGAIRVVRARAIANAAGPWVGDVLHGALGRGAHHSVRLVKGSHIV
TRRLFDHDHAYIFQNPDKRIIFAIPYERDFTLIGTTDVEYTSDPARVAIDRDETQYLCDSINRYFKRKISPADVHWTYSG
VRPLLEDENAANASAVTRDYRLEMDDGEGAPLLSVFGGKITTFRKLAEEAGDMLCRALGRDAPAWTAGAPLPGGDIANAK
FDAFADAFAKRHRWLPAPLARRYARAYGTRAARVVGNAQSLADLGAEIVPGLFEAELRYLRDTEWATSAQDVLWRRSKLG
LHVAPGTLDAASAALDAWFAAAHAPHA
>Mature_507_residues
MNQPNRYDLLVVGGGINGAGIARDAAGRGLSVLLCEQDDLASHTSSASTKLIHGGLRYLEYKEFGLVRKALQERETLLRA
APHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHAAGAPLVDSIRRGFVYSDGWVDDARLVVL
NALDAKERGAEILTRTKLVSAERRSDEWEARLQQPDGAIRVVRARAIANAAGPWVGDVLHGALGRGAHHSVRLVKGSHIV
TRRLFDHDHAYIFQNPDKRIIFAIPYERDFTLIGTTDVEYTSDPARVAIDRDETQYLCDSINRYFKRKISPADVHWTYSG
VRPLLEDENAANASAVTRDYRLEMDDGEGAPLLSVFGGKITTFRKLAEEAGDMLCRALGRDAPAWTAGAPLPGGDIANAK
FDAFADAFAKRHRWLPAPLARRYARAYGTRAARVVGNAQSLADLGAEIVPGLFEAELRYLRDTEWATSAQDVLWRRSKLG
LHVAPGTLDAASAALDAWFAAAHAPHA

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=513, Percent_Identity=29.0448343079922, Blast_Score=179, Evalue=7e-45,
Organism=Homo sapiens, GI285002231, Length=513, Percent_Identity=29.0448343079922, Blast_Score=179, Evalue=7e-45,
Organism=Escherichia coli, GI2367226, Length=454, Percent_Identity=50.8810572687225, Blast_Score=436, Evalue=1e-123,
Organism=Escherichia coli, GI1788574, Length=491, Percent_Identity=27.6985743380855, Blast_Score=103, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI115534726, Length=516, Percent_Identity=28.2945736434109, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17509253, Length=521, Percent_Identity=28.2149712092131, Blast_Score=146, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6322036, Length=574, Percent_Identity=26.8292682926829, Blast_Score=143, Evalue=7e-35,
Organism=Drosophila melanogaster, GI161077125, Length=512, Percent_Identity=29.8828125, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24653942, Length=512, Percent_Identity=29.8828125, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24653944, Length=512, Percent_Identity=29.8828125, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI20130025, Length=512, Percent_Identity=29.8828125, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24586295, Length=383, Percent_Identity=28.4595300261097, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI19921278, Length=521, Percent_Identity=25.3358925143954, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 56036; Mature: 56036

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS00977 FAD_G3PDH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPNRYDLLVVGGGINGAGIARDAAGRGLSVLLCEQDDLASHTSSASTKLIHGGLRYLE
CCCCCEEEEEEEECCCCCCCCCHHCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHH
YKEFGLVRKALQERETLLRAAPHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PGSRGIDMRRHAAGAPLVDSIRRGFVYSDGWVDDARLVVLNALDAKERGAEILTRTKLVS
CCCCCCCHHHHCCCCCHHHHHHHCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
AERRSDEWEARLQQPDGAIRVVRARAIANAAGPWVGDVLHGALGRGAHHSVRLVKGSHIV
HHHCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCHHH
TRRLFDHDHAYIFQNPDKRIIFAIPYERDFTLIGTTDVEYTSDPARVAIDRDETQYLCDS
HHHHHCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHH
INRYFKRKISPADVHWTYSGVRPLLEDENAANASAVTRDYRLEMDDGEGAPLLSVFGGKI
HHHHHHHCCCCCCEEEECCCCCCHHCCCCCCCHHHEEEEEEEEECCCCCCCCHHHHCCCH
TTFRKLAEEAGDMLCRALGRDAPAWTAGAPLPGGDIANAKFDAFADAFAKRHRWLPAPLA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
RRYARAYGTRAARVVGNAQSLADLGAEIVPGLFEAELRYLRDTEWATSAQDVLWRRSKLG
HHHHHHHCCHHHHHHCCHHHHHHCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
LHVAPGTLDAASAALDAWFAAAHAPHA
EEECCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNQPNRYDLLVVGGGINGAGIARDAAGRGLSVLLCEQDDLASHTSSASTKLIHGGLRYLE
CCCCCEEEEEEEECCCCCCCCCHHCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHH
YKEFGLVRKALQERETLLRAAPHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PGSRGIDMRRHAAGAPLVDSIRRGFVYSDGWVDDARLVVLNALDAKERGAEILTRTKLVS
CCCCCCCHHHHCCCCCHHHHHHHCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
AERRSDEWEARLQQPDGAIRVVRARAIANAAGPWVGDVLHGALGRGAHHSVRLVKGSHIV
HHHCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCHHH
TRRLFDHDHAYIFQNPDKRIIFAIPYERDFTLIGTTDVEYTSDPARVAIDRDETQYLCDS
HHHHHCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHH
INRYFKRKISPADVHWTYSGVRPLLEDENAANASAVTRDYRLEMDDGEGAPLLSVFGGKI
HHHHHHHCCCCCCEEEECCCCCCHHCCCCCCCHHHEEEEEEEEECCCCCCCCHHHHCCCH
TTFRKLAEEAGDMLCRALGRDAPAWTAGAPLPGGDIANAKFDAFADAFAKRHRWLPAPLA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
RRYARAYGTRAARVVGNAQSLADLGAEIVPGLFEAELRYLRDTEWATSAQDVLWRRSKLG
HHHHHHHCCHHHHHHCCHHHHHHCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
LHVAPGTLDAASAALDAWFAAAHAPHA
EEECCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8157588; 10984043 [H]