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The map label for this gene is yhbH [C]

Identifier: 161523703

GI number: 161523703

Start: 571784

End: 572143

Strand: Reverse

Name: yhbH [C]

Synonym: Bmul_0523

Alternate gene names: 161523703

Gene position: 572143-571784 (Counterclockwise)

Preceding gene: 161523704

Following gene: 161523702

Centisome position: 16.59

GC content: 56.39

Gene sequence:

>360_bases
ATGAACCTGAAGATCAGTGGACATCATCTCGAAGTCACGCCTGCGATTCGCGAATACGTGATCACCAAGCTGGACCGGGT
GCTACGGCATAGCGATCAGGTGATCGATGGCACTGTGATCCTCTCGGTCGACAACCACAAGGAAAAGGACAAGCAGCAGC
GTGCGGAAATCAATCTGCACCTGAAGGGCAAGGACATCTTCGTCGAAAGTTCGAACGGCAACCTCTATGCAGCGATCGAT
CTGCTGATCGACAAGCTGGACCGCCAGGTCGTCAAGCACATGGAGCGCCTGCAGACGCACGCGCACGATCCGATCAAGCT
GCAGCCGGCCGTCGACCAGATCGAACTGCCGCCGCAATAA

Upstream 100 bases:

>100_bases
CGGGCGACCTGTCCGCGATTCGCCGCCTCGTGCGGGACGGGCAAGTCGACCGGAGCGCCGCCTCGATGCGGCCGGGTGGT
CACTCGCTTGGAGAAGCACT

Downstream 100 bases:

>100_bases
CCGTTACCGCAACATAGCGCCGCCCGGTTCGCCGGGCGTTTTTTTTTGCGGTGCCGCGCAGCGGCGCCGAGGGTCGGCCG
CGCTGCACCACGCGCGCGGC

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: ORF130 [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNLKISGHHLEVTPAIREYVITKLDRVLRHSDQVIDGTVILSVDNHKEKDKQQRAEINLHLKGKDIFVESSNGNLYAAID
LLIDKLDRQVVKHMERLQTHAHDPIKLQPAVDQIELPPQ

Sequences:

>Translated_119_residues
MNLKISGHHLEVTPAIREYVITKLDRVLRHSDQVIDGTVILSVDNHKEKDKQQRAEINLHLKGKDIFVESSNGNLYAAID
LLIDKLDRQVVKHMERLQTHAHDPIKLQPAVDQIELPPQ
>Mature_119_residues
MNLKISGHHLEVTPAIREYVITKLDRVLRHSDQVIDGTVILSVDNHKEKDKQQRAEINLHLKGKDIFVESSNGNLYAAID
LLIDKLDRQVVKHMERLQTHAHDPIKLQPAVDQIELPPQ

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=100, Percent_Identity=35, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 13636; Mature: 13636

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKISGHHLEVTPAIREYVITKLDRVLRHSDQVIDGTVILSVDNHKEKDKQQRAEINLH
CCEEECCCEEEECHHHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCCHHHHHHHEEEEE
LKGKDIFVESSNGNLYAAIDLLIDKLDRQVVKHMERLQTHAHDPIKLQPAVDQIELPPQ
ECCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MNLKISGHHLEVTPAIREYVITKLDRVLRHSDQVIDGTVILSVDNHKEKDKQQRAEINLH
CCEEECCCEEEECHHHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCCHHHHHHHEEEEE
LKGKDIFVESSNGNLYAAIDLLIDKLDRQVVKHMERLQTHAHDPIKLQPAVDQIELPPQ
ECCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1417413 [H]