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The map label for this gene is cdd [H]

Identifier: 161486621

GI number: 161486621

Start: 1953477

End: 1954364

Strand: Direct

Name: cdd [H]

Synonym: VV1962

Alternate gene names: 161486621

Gene position: 1953477-1954364 (Clockwise)

Preceding gene: 37680145

Following gene: 37680147

Centisome position: 58.23

GC content: 47.52

Gene sequence:

>888_bases
ATGAAGAGTCGCTTTGAGAACGCGCTGGCAAGCGCACCAGAATCACTTTCACGCCATCTAGCGCCTATCATTTTGGCTGC
TGACTTTGATGCTTCCCTTTCAACAGTTCAGTTTGATGAGTTACTCAAGCAAACAGGGATGACCGATAACCAACTACGTG
TTGCGTTGCTTCCCTTTGCTGCCGCTTACTCTTACGCGCCCATCTCTGAGTTTTATGTTGGTGCGATTGTTCGTGGCCTA
TCTGGTACTCTTTATTTTGGCGCTAACATGGAGTTTGATGGGGTCCAACTTGGACAAACGGTTCATGCTGAACAGTCGGC
TATTAGTCACGCATGGATGAAGGGCGAGCAAGGTCTTTCAGACATCACCATTAATTTCAGCCCTTGTGGTCACTGCCGTC
AGTTCATGAATGAATTATCCAGTGCCAAAGAGCTTAAGATTCAATTACCAGAGCGCGAAGAAAAGAAACTACACGACTAT
CTGCCAGATTCATTTGGCCCATCAGATTTGGGCATCGAATCGGCATTAATGAGCCAAGTCCATCATGGTTTCGCCACTGA
AGATGATGATGCCTTAATGCAACGTGCGGTTGAAGCCATGAACCGCAGTCATGCACCTTATACGCACAACTTGAGCGGTG
TGGCATTGCAGACTGAAAGTGGACGCGTTTATCTGGGTGCATACGCCGAAAATGCCGCTTTCAACCCAAGCCTTCCACCA
CTGCAAGTGGCATTGATCCAGTTGCTTCTCGCGGGTGAGAGATTTGAAAATATTCAGTCTGCGGCGCTTGTTGAAAGCCA
TAAAGGCAAAATTAGCCACTTAGCATGTACCCAGTCCACACTGGAAGCCTTAAACCCCGATATTCCAGTGAGTTATCTCA
GCTTATAG

Upstream 100 bases:

>100_bases
GCAACATAAACGACCGTTACATTATCTATAGTGACAGAGATCACTGAAGAGTTTTCGTTCTTGCATAGAATAACCTTCCA
TGCAATTACAAGGATTCACC

Downstream 100 bases:

>100_bases
CGATATGTCGTCAGCCCTACTTTACGTAGGGCTTTCTTTAAAATCACAAAGCAAACGTTTGCTTTGCAGATTAAATTGAG
TATGATCGGCGGCAATTTTA

Product: cytidine deaminase

Products: NA

Alternate protein names: Cytidine aminohydrolase; CDA [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKSRFENALASAPESLSRHLAPIILAADFDASLSTVQFDELLKQTGMTDNQLRVALLPFAAAYSYAPISEFYVGAIVRGL
SGTLYFGANMEFDGVQLGQTVHAEQSAISHAWMKGEQGLSDITINFSPCGHCRQFMNELSSAKELKIQLPEREEKKLHDY
LPDSFGPSDLGIESALMSQVHHGFATEDDDALMQRAVEAMNRSHAPYTHNLSGVALQTESGRVYLGAYAENAAFNPSLPP
LQVALIQLLLAGERFENIQSAALVESHKGKISHLACTQSTLEALNPDIPVSYLSL

Sequences:

>Translated_295_residues
MKSRFENALASAPESLSRHLAPIILAADFDASLSTVQFDELLKQTGMTDNQLRVALLPFAAAYSYAPISEFYVGAIVRGL
SGTLYFGANMEFDGVQLGQTVHAEQSAISHAWMKGEQGLSDITINFSPCGHCRQFMNELSSAKELKIQLPEREEKKLHDY
LPDSFGPSDLGIESALMSQVHHGFATEDDDALMQRAVEAMNRSHAPYTHNLSGVALQTESGRVYLGAYAENAAFNPSLPP
LQVALIQLLLAGERFENIQSAALVESHKGKISHLACTQSTLEALNPDIPVSYLSL
>Mature_295_residues
MKSRFENALASAPESLSRHLAPIILAADFDASLSTVQFDELLKQTGMTDNQLRVALLPFAAAYSYAPISEFYVGAIVRGL
SGTLYFGANMEFDGVQLGQTVHAEQSAISHAWMKGEQGLSDITINFSPCGHCRQFMNELSSAKELKIQLPEREEKKLHDY
LPDSFGPSDLGIESALMSQVHHGFATEDDDALMQRAVEAMNRSHAPYTHNLSGVALQTESGRVYLGAYAENAAFNPSLPP
LQVALIQLLLAGERFENIQSAALVESHKGKISHLACTQSTLEALNPDIPVSYLSL

Specific function: This enzyme scavenge exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis [H]

COG id: COG0295

COG function: function code F; Cytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788465, Length=284, Percent_Identity=53.169014084507, Blast_Score=274, Evalue=4e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR013171
- InterPro:   IPR006263
- InterPro:   IPR016193
- InterPro:   IPR020797 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1; PF08211 dCMP_cyt_deam_2 [H]

EC number: =3.5.4.5 [H]

Molecular weight: Translated: 32141; Mature: 32141

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRFENALASAPESLSRHLAPIILAADFDASLSTVQFDELLKQTGMTDNQLRVALLPFA
CCCHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHH
AAYSYAPISEFYVGAIVRGLSGTLYFGANMEFDGVQLGQTVHAEQSAISHAWMKGEQGLS
HHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCC
DITINFSPCGHCRQFMNELSSAKELKIQLPEREEKKLHDYLPDSFGPSDLGIESALMSQV
EEEEECCCCHHHHHHHHHHCCHHEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
HHGFATEDDDALMQRAVEAMNRSHAPYTHNLSGVALQTESGRVYLGAYAENAAFNPSLPP
HCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCH
LQVALIQLLLAGERFENIQSAALVESHKGKISHLACTQSTLEALNPDIPVSYLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHCC
>Mature Secondary Structure
MKSRFENALASAPESLSRHLAPIILAADFDASLSTVQFDELLKQTGMTDNQLRVALLPFA
CCCHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHH
AAYSYAPISEFYVGAIVRGLSGTLYFGANMEFDGVQLGQTVHAEQSAISHAWMKGEQGLS
HHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCC
DITINFSPCGHCRQFMNELSSAKELKIQLPEREEKKLHDYLPDSFGPSDLGIESALMSQV
EEEEECCCCHHHHHHHHHHCCHHEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
HHGFATEDDDALMQRAVEAMNRSHAPYTHNLSGVALQTESGRVYLGAYAENAAFNPSLPP
HCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCH
LQVALIQLLLAGERFENIQSAALVESHKGKISHLACTQSTLEALNPDIPVSYLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA