Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is gutQ
Identifier: 161486447
GI number: 161486447
Start: 2798121
End: 2799086
Strand: Direct
Name: gutQ
Synonym: S2922
Alternate gene names: 161486447
Gene position: 2798121-2799086 (Clockwise)
Preceding gene: 30064066
Following gene: 30064069
Centisome position: 60.84
GC content: 56.0
Gene sequence:
>966_bases ATGAGTGAAGCACTACTGAACACGGGACGTCAGACGTTAATGCTGGAGTTGCAGGAAGCAAGCCGTTTACCGGAACGTCT GGGCGATGATTTTGTTCGCGCCGCCAATATCATCCTGCACTGCGAAGGCAAAGTGGTGGTTTCGGGAATTGGCAAATCGG GCCACATTGGTAAGAAAATCGCCGCAACACTTGCCAGTACCGGCACACCGGCTTTTTTTGTCCATCCGGCAGAAGCACTG CACGGCGATCTGGGGATGATTGAAAGCCGCGATGTGATGCTGTTTATCTCTTACTCCGGTGGCGCGAAGGAACTGGATCT GATTATTCCGCGTCTGGAAGATAAATCTATCGCGCTGCTGGCGATGACCGGCAAACCGACGTCACCGCTGGGCCTGGCGG CGAAAGCGGTGCTGGATATCTCCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCACCGTCAATACC CTGATGATGGGTGACGCGCTGGCGATGGCGGTCATGCAGGCGCGCGGTTTTAATGAAGAAGATTTTGCCCGCTCCCACCC AGCTGGGGCACTGGGCGCTCGCTTGCTGAATAAAGTGCATCATCTGATGCGTCGTGATGACGCTATCCCACAGGTAGCGT TAACCGCCAGCGTGATGGATGCGATGCTGGAACTCAGCCGCACCGGTCTGGGGCTGGTGGCGGTATGTGACGCTCAACAA CAGGTACAAGGCGTCTTTACCGACGGCGATTTACGTCGCTGGCTGGTAGGCGGCGGCGCACTCACCACGCCAGTTAATGA AGCGATGACGACAGGCGGCACCACATTACAGGCACAAAGTCGCGCCATCGACGCCAAAGAAGTTCTGATGAAACGCAAAA TCACTGCCGCACCAGTGGTAGATGAAAACGGCAAACTCACCGGCGCAATTAACCTGCAGGATTTCTATCAGGCCGGGATT ATTTAA
Upstream 100 bases:
>100_bases GAAAGCGTCGATAAGCTAATTACCGACGCAGGTATCGATCCGGCGTTTCGTCAGGCGCTGGAAGAGAAAGGGATCGATGT GATCATAACCGGAGAGAGCA
Downstream 100 bases:
>100_bases TCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCAGTTTCCAGCATTCGCGCACAGGCTGCCCAGTT GTGATGATTTTGTGCCAGTG
Product: D-arabinose 5-phosphate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSEALLNTGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ QVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAGI I
Sequences:
>Translated_321_residues MSEALLNTGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ QVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAGI I >Mature_320_residues SEALLNTGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALH GDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTL MMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQ VQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAGII
Specific function: Not Known. [C]
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI87082151, Length=321, Percent_Identity=98.7538940809969, Blast_Score=645, Evalue=0.0, Organism=Escherichia coli, GI1789588, Length=314, Percent_Identity=45.5414012738853, Blast_Score=281, Evalue=6e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR004800 - InterPro: IPR001347 [H]
Pfam domain/function: PF00571 CBS; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 34034; Mature: 33903
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEALLNTGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI CCCHHHHCCCHHEEEEHHHHHCCHHHHCHHHHHHCCEEEEECCEEEEEECCCCCCCHHHH AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL HHHHHCCCCCEEEECCHHHHCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCEEEE AMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE EECCCCCCCHHHHHHHHEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHH DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH QVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVV HHCEECCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEHHHHCCCHHHHHHHHCCCCCCEE DENGKLTGAINLQDFYQAGII CCCCCEEEEEEHHHHHHHCCC >Mature Secondary Structure SEALLNTGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI CCHHHHCCCHHEEEEHHHHHCCHHHHCHHHHHHCCEEEEECCEEEEEECCCCCCCHHHH AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL HHHHHCCCCCEEEECCHHHHCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCEEEE AMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE EECCCCCCCHHHHHHHHEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHH DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH QVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVV HHCEECCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEHHHHCCCHHHHHHHHCCCCCCEE DENGKLTGAINLQDFYQAGII CCCCCEEEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2134185 [H]